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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003445.1-P Field mustard peroxisome 98.46 96.65
CDY51560 Canola peroxisome 96.83 95.28
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 85.62 89.93
CDY24379 Canola plasma membrane 83.43 87.85
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 80.83 80.89
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 79.94 80.07
CDX89963 Canola cytosol, nucleus, plasma membrane 75.95 73.97
CDY51307 Canola cytosol, peroxisome, plasma membrane 75.47 73.5
CDY15249 Canola cytosol, peroxisome, plasma membrane 75.79 73.46
CDY15432 Canola cytosol 72.79 73.2
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 61.41 68.35
CDX67881 Canola cytosol 66.61 68.28
CDY25095 Canola cytosol 66.78 68.16
CDY27510 Canola cytosol 65.88 67.64
CDY48003 Canola cytosol 64.99 67.11
CDX80072 Canola cytosol 65.23 67.03
CDY37776 Canola cytosol, peroxisome, plasma membrane 66.78 66.13
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 69.21 65.69
KRH69152 Soybean cytosol, peroxisome, plasma membrane 68.07 65.37
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 68.32 65.35
KRH33644 Soybean cytosol, peroxisome, plasma membrane 67.67 64.98
Os05t0137200-01 Rice plasma membrane 20.71 64.89
KRH68334 Soybean cytosol, peroxisome, plasma membrane 67.1 64.38
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 66.04 63.07
GSMUA_Achr1P25070_001 Banana plasma membrane 45.9 62.36
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 60.44 61.39
OQU77362 Sorghum mitochondrion, plasma membrane 57.43 61.27
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 62.63 60.33
KXG32330 Sorghum plastid 62.63 60.23
Solyc06g009290.2.1 Tomato nucleus 67.75 59.57
CDY35168 Canola golgi, peroxisome, plasma membrane 51.83 58.48
TraesCS1A01G081300.1 Wheat unclear 60.36 58.23
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 60.2 58.12
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 60.2 58.07
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 62.71 57.83
HORVU1Hr1G017460.3 Barley plasma membrane 60.11 57.68
CDX84897 Canola cytosol 5.52 57.63
GSMUA_Achr9P16700_001 Banana plasma membrane 57.92 56.14
CDX86437 Canola cytosol 6.66 55.03
CDX86442 Canola cytosol, mitochondrion, plastid 2.84 51.47
CDX93393 Canola plasma membrane 43.22 43.43
CDY37953 Canola plasma membrane 43.05 43.27
CDX94395 Canola plasma membrane 42.73 42.63
CDY00109 Canola plasma membrane 43.05 42.57
CDX92739 Canola plasma membrane 42.73 42.39
CDY20012 Canola plasma membrane 42.89 42.14
CDX86408 Canola plasma membrane 42.16 41.96
CDY65012 Canola plasma membrane 42.57 41.82
CDX89380 Canola plasma membrane 42.73 41.25
CDY27639 Canola plasma membrane 40.21 40.64
CDX86445 Canola plasma membrane 40.13 39.71
CDY42770 Canola golgi, plasma membrane, vacuole 36.47 39.56
CDX85192 Canola plasma membrane 40.37 39.16
CDY04018 Canola plasma membrane 39.4 39.08
CDY46744 Canola cytosol, peroxisome, plasma membrane 41.19 37.89
CDX79704 Canola plasma membrane 41.19 37.81
CDX84896 Canola plasma membrane 31.76 37.2
CDY64952 Canola peroxisome, plasma membrane, vacuole 28.35 35.43
CDY20443 Canola cytosol, mitochondrion, plasma membrane 38.18 33.55
CDY24958 Canola mitochondrion, plasma membrane, plastid 37.94 33.48
CDY07647 Canola cytosol 38.02 33.4
CDY53591 Canola cytosol, mitochondrion, plasma membrane 38.18 33.38
CDY65312 Canola cytosol 37.69 33.17
CDX76106 Canola cytosol, golgi, peroxisome 37.45 32.93
CDY21871 Canola endoplasmic reticulum, plasma membrane 1.46 25.0
Protein Annotations
MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078J0Q5UniProt:A0A078J0Q5InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY58790ProteinID:CDY58790ProteinID:CDY58790.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00025144001InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0004EDC59CSEG:seg:::
Description
BnaA07g38050DBnaA07g38050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0Q5]
Coordinates
chrLK033699:+:19715..26314
Molecular Weight (calculated)
133670.0 Da
IEP (calculated)
7.389
GRAVY (calculated)
0.213
Length
1231 amino acids
Sequence
(BLAST)
0001: MVNVSSFETS HVHSRSPTQL EMKKGKIEEK AKTVPFYKLF SFSDFTDVLL MIVGSIGAIG NGLGFPLMTL LFGDLIDTIG RNLFTNDIVE LISKICLKFV
0101: YLGLGTFVAA FLQVSCWVIT GERQAARIRS LYLKTILRQD IVFFDVETNT GEVVGRMSGD TVLILDAMGE KVGKFIQLLA TFLAGYALAF VKGWLLTLVM
0201: LASIPLLAMA GAATSIISTK ASSQQQAAYA KASTIVEQTC GSIRTVASFT REKQAISSYK ELINLAYEST VNQGFSTGLG LGVMFLVFFC SYALAIWFGG
0301: EMILRKGYTG GAVINVMVIV VTSSMSLGQA APCLTSFAAG QAAAYKMFET IKRKPVIDCF DLNGKVLEDI QGKIELRDVC FSYPARPREE VFRKFSLMIS
0401: SGTTTALVGE SGSGKSTVIS LIERFYDPNS GQVLIDGVDL KEFQLKWIRG KIGLVSQEPV LFSSSIMENI GYGKVGATVQ EIEAATKLAN AAKFIDKLPR
0501: GLETMVGEHG TQLSGGQKQR IAIARAILKD PRILLLDEAT SALDAESERV VQEALDRVMV NRTTVIVAHR LSTVRNADVI AVLHRGKIVE EGSHLELLKD
0601: HEGAYSQLIR LQEINTESKR LEISNGQQDG SIRNGGNSAS RMHGDDDESV FALGLLAGQE NTEMPKDMPQ DVSITRIAAL NKREALILTL GTIVCALDGA
0701: IFPIFGLFFA KVIMSFFQPP HELRSNSRYW SIIFVLLGVL SLVVYPTHMS LFAVAGGRLV RRIRSMCFEK VVHMEVGWFD EPENSSGPIG ARLSADAALI
0801: RTLVGDSLAL TVKNVATAVV GIIIAFVISW ELAVIILVTI PLTGINHYVQ IKFMKGFSAD AKTKYEEASQ VASDAVGSIR TVASFCAEEK VIEMYKKRCE
0901: ETIKSGMKQG LVAGLGFGLS FFVLYSVYAA CFYAGARLVK DGRTTYNGIF EVFLTLTVTT IGISGVSSSA PDSSKAKSAA ASIFRIIDRK SKIDTRDESG
1001: MVLENVKGGI EFSPNQTVAL VGESGSGKST VISLLQRFYD PDSGHITLDG VDLKKLQLKW LRQQMGLVGQ EPVLFNDTIR ANIAYGKGGE EATEAEIVAA
1101: SELSNAHKFI SSIQKGYDTV VGERGIQLSG GQKQRVAIAR AIVKEPKILL LDEATSALDA ESERVVQDAL DRVMVNRTTI VVAHRLSTVK NADIIAVVEN
1201: GMIVEKGTHE TLMNIEGGVY ASLVQPHMSA F
Best Arabidopsis Sequence Match ( AT4G01830.1 )
(BLAST)
0001: MKKGNLEANT KTVPFYKLFF FSDSTDVLLM IVGSIGAIAN GVCSPLMTLL FGELIDAMGP NQNNEEIVER VSKVCLSLVY LGLGALGAAF LQVACWMITG
0101: ERQAARIRSL YLKTILRQDI GFFDVEMTTG EVVGRMSGDT VLILDAMGEK VGKFIQLIST FVGGFVIAFL RGWLLTLVML TSIPLLAMSG AAIAIIVTRA
0201: SSQEQAAYAK ASNVVEQTLG SIRTVASFTG EKQAMSSYKE LINLAYKSNV KQGFVTGLGL GVMFLVFFST YALGTWFGGE MILRKGYTGG AVINVMVTVV
0301: SSSIALGQAS PCLTAFTAGK AAAYKMFETI EREPLIDTFD LNGKVLEDIR GEIELRDVCF SYPARPKEEV FGGFSLLIPS GTTTALVGES GSGKSTVISL
0401: IERFYDPNSG QVLIDGVDLK EFQLKWIRGK IGLVSQEPVL FSSSIMENIG YGKEGATVEE IQAASKLANA AKFIDKLPLG LETLVGEHGT QLSGGQKQRI
0501: AIARAILKDP RILLLDEATS ALDAESERVV QEALDRIMVN RTTVIVAHRL STVRNADIIA VIHRGKIVEE GSHSELLKDH EGAYSQLLRL QEINKESKRL
0601: EISDGSISSG SSRGNNSTRQ DDDSFSVLGL LAGQDSTKMS QELSQKVSFT RIAALNKPEI PILILGTLVG AVNGTIFPIF GILFAKVIEA FFKAPHELKR
0701: DSRFWSMIFV LLGVAAVIVY PTTNYLFAIA GGRLIRRIRS MCFEKVVHME VGWFDEPGNS SGAMGARLSA DAALIRTLVG DSLCLSVKNV ASLVTGLIIA
0801: FTASWEVAII ILVIIPFIGI NGYIQIKFMK GFSADAKAKY EEASQVANDA VGSIRTVASF CAEEKVMEMY KKRCEDTIKS GIKQGLISGV GFGISFFVLY
0901: SVYASCFYVG ARLVKAGRTN FNDVFQVFLA LTLTAVGISQ ASSFAPDSSK GKGAAVSIFR IIDRISKIDS RDESGMVLEN VKGDIELCHI SFTYQTRPDV
1001: QVFRDLCLSI RAGQTVALVG ESGSGKSTVI SLLQRFYDPD SGHITLDGVE LKKLRLKWLR QQMGLVGQEP VLFNDTIRAN IAYGKGGEEA TEAEIIAASE
1101: LANAHRFISS IQKGYDTVVG ERGIQLSGGQ KQRVAIARAI VKEPKILLLD EATSALDAES ERVVQDALDR VMVNRTTIVV AHRLSTIKNA DVIAVVKNGV
1201: IAEKGTHETL INIEGGVYAS LVQLHINASN
Arabidopsis Description
ABCB5ABC transporter B family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYI3]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.