Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023087.1-P | Field mustard | cytosol, nucleus, plasma membrane | 99.78 | 99.7 |
| CDX79704 | Canola | plasma membrane | 99.48 | 99.25 |
| AT2G36910.1 | Thale cress | peroxisome | 92.38 | 96.11 |
| KRG96023 | Soybean | cytosol, peroxisome, plasma membrane | 86.4 | 86.33 |
| KRH67730 | Soybean | cytosol, peroxisome, plasma membrane | 85.95 | 85.69 |
| KRH32507 | Soybean | cytosol, nucleus, plasma membrane | 85.28 | 84.96 |
| KRH19897 | Soybean | cytosol, peroxisome, plasma membrane | 84.45 | 84.27 |
| VIT_08s0007g05060.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 84.53 | 83.53 |
| Solyc09g008240.2.1 | Tomato | peroxisome | 81.76 | 83.26 |
| PGSC0003DMT400009924 | Potato | peroxisome | 82.88 | 83.2 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 73.47 | 78.89 |
| GSMUA_Achr4P12130_001 | Banana | cytosol | 75.19 | 74.68 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 75.04 | 73.39 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 75.34 | 73.31 |
| GSMUA_Achr4P04430_001 | Banana | cytosol, peroxisome, plasma membrane | 73.92 | 72.99 |
| Os08t0564300-04 | Rice | plasma membrane | 72.42 | 72.1 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 75.19 | 71.3 |
| Zm00001d031871_P001 | Maize | cytosol | 73.54 | 69.49 |
| OQU80682 | Sorghum | plasma membrane | 72.2 | 62.69 |
| CDX84897 | Canola | cytosol | 5.08 | 57.63 |
| CDX86437 | Canola | cytosol | 6.28 | 56.38 |
| CDX86408 | Canola | plasma membrane | 49.1 | 53.11 |
| CDY65012 | Canola | plasma membrane | 49.4 | 52.75 |
| CDY00109 | Canola | plasma membrane | 48.8 | 52.45 |
| CDY20012 | Canola | plasma membrane | 48.88 | 52.19 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 2.62 | 51.47 |
| CDX94395 | Canola | plasma membrane | 46.19 | 50.08 |
| CDX89380 | Canola | plasma membrane | 46.11 | 48.39 |
| CDX92739 | Canola | plasma membrane | 44.84 | 48.35 |
| CDX93393 | Canola | plasma membrane | 44.17 | 48.24 |
| CDY27639 | Canola | plasma membrane | 43.72 | 48.03 |
| CDY37953 | Canola | plasma membrane | 43.95 | 48.0 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 39.69 | 46.78 |
| CDX84896 | Canola | plasma membrane | 35.5 | 45.2 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 36.17 | 44.36 |
| CDY25095 | Canola | cytosol | 39.99 | 44.36 |
| CDX67881 | Canola | cytosol | 39.76 | 44.3 |
| CDX86445 | Canola | plasma membrane | 41.03 | 44.13 |
| CDX80072 | Canola | cytosol | 38.94 | 43.49 |
| CDY27510 | Canola | cytosol | 38.94 | 43.45 |
| CDY48003 | Canola | cytosol | 38.64 | 43.37 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 40.88 | 43.28 |
| CDX85192 | Canola | plasma membrane | 40.96 | 43.18 |
| CDY24379 | Canola | plasma membrane | 37.67 | 43.11 |
| CDY15432 | Canola | cytosol | 39.39 | 43.06 |
| CDY04018 | Canola | plasma membrane | 39.91 | 43.03 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 40.58 | 42.96 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 40.66 | 42.83 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 39.16 | 42.16 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 36.7 | 41.89 |
| CDY58790 | Canola | peroxisome | 37.89 | 41.19 |
| CDY51560 | Canola | peroxisome | 38.19 | 40.85 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 28.18 | 38.27 |
| CDY65312 | Canola | cytosol | 39.84 | 38.1 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 39.76 | 38.0 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 39.61 | 37.83 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 39.39 | 37.78 |
| CDY07647 | Canola | cytosol | 39.54 | 37.76 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 39.46 | 37.5 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.64 | 30.56 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078IBL3 | UniProt:A0A078IBL3 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY46744 | ProteinID:CDY46744 |
| ProteinID:CDY46744.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00086065001 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF384 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EE5216 | SEG:seg | : | : |
Description
BnaA03g16880DBnaA03g16880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBL3]
Coordinates
chrLK032684:+:31927..37449
Molecular Weight (calculated)
146699.0 Da
IEP (calculated)
7.761
GRAVY (calculated)
0.006
Length
1338 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSQESVQIEE EIKSLEQWRW SEMQGLELLP EPSSNSNKNS RNPETELQEH PPEMENGGGT PPPPATVEEP KKAEIRGVAF KELFRFADGL DYVLMTIGSV
0101: GAFVHGCSLP LFLRFFADLV NSFGSNANNV DKMMQEVLKY ALYFLVVGAA IWASSWAEIS CWMWTGERQT TKMRIKYLEA ALNQDIQFFD TEVRTSDVVS
0201: AINTDAVMVQ DAISEKLGNF IHYMATFVSG FIVGFTAVWQ LALVTIAVVP LIAVIGGIHT TTLSKLSNKS QESLSQAGNI VEQQTVVQIR VVMAFVGESR
0301: ASQAYSSALK TAQKLGYKTG FAKGMGLGAT YFVVFCCYAL LLWYGGYLVR HHLTNGGLAI ATMFAVMIGG LGLGQSVPSM AAFAKAKVAA AKIFRIIDHK
0401: PTIERNSESG VELESVTGLV ELKNVDFSYP SRPDVKILND FTLSVPAGKT IALVGSSGSG KSTVVSLIER FYDPTSGQVL LDGHDLKTLK LKWLRQQIGL
0501: VSQEPALFAT SIKENILLGR PDADQVEVEE AARVANAHSF IIKLPDGFDT QVGERGLQLS GGQKQRIAIA RAMLKNPAIL LLDEATSALD SESEKLVQEA
0601: LDRFMIGRTT LIIAHRLSTI RKADLVAVLQ QGSVSEIGTH DELFAKGENG IYSKLIKMQE AAHETAMNNA RKSSARPSSA RNSVSSPIIA RNSSYGRSPY
0701: SRRLSDFSTT DFSLSVEASS YPNYRHDKLP FKDQANSFWR LAKMNSPEWK YALVGSVGSV ICGSLSAFFA YVLSAVLSIY YNPDHNYMIK QIDKYCYLLI
0801: GLSSAALIFN TLQHSFWDIV GENLTKRVRE KMLTAVLKNE MAWFDQEENE SARISARLAL DANNVRSAIG DRISVIVQNT ALMLVACTAG FVLQWRLALV
0901: LVAVFPVVVA ATVLQKMFMT GFSGDLEAAH AKGTQLAGEA IANVRTVAAF NSEAKIVRLY TANLEPPLKR CFWKGQIAGS GYGVAQFCLY ASYALGLWYA
1001: SWLVKHGISD FSKTIRVFMV LMVSANGAAE TLTLAPDFIK GGQAMRSVFE LLDRKTEIEP DDLDTTPVPD RLRGEVELKH IDFSYPSRPD IQVFRDLSLR
1101: ARAGKTLALV GPSGCGKSSV ISLIQRFYEP SSGRVLIDGK DIRKYNLKAI RKHIAIVPQE PCLFGTTIYE NIAYGHECAT EAEIIQAATL ASAHKFISAL
1201: PDGYKTYVGE RGVQLSGGQK QRIAIARALV RKAEIMLLDE ATSALDAESE RSVQEALDQA CSGRTSIVVA HRLSTIRNAH VIAVIDDGKV AEQGSHSHLL
1301: KNYPDGIYAR MIQLQRFTHT QVIGMTSGSS SRVKDDDA
0101: GAFVHGCSLP LFLRFFADLV NSFGSNANNV DKMMQEVLKY ALYFLVVGAA IWASSWAEIS CWMWTGERQT TKMRIKYLEA ALNQDIQFFD TEVRTSDVVS
0201: AINTDAVMVQ DAISEKLGNF IHYMATFVSG FIVGFTAVWQ LALVTIAVVP LIAVIGGIHT TTLSKLSNKS QESLSQAGNI VEQQTVVQIR VVMAFVGESR
0301: ASQAYSSALK TAQKLGYKTG FAKGMGLGAT YFVVFCCYAL LLWYGGYLVR HHLTNGGLAI ATMFAVMIGG LGLGQSVPSM AAFAKAKVAA AKIFRIIDHK
0401: PTIERNSESG VELESVTGLV ELKNVDFSYP SRPDVKILND FTLSVPAGKT IALVGSSGSG KSTVVSLIER FYDPTSGQVL LDGHDLKTLK LKWLRQQIGL
0501: VSQEPALFAT SIKENILLGR PDADQVEVEE AARVANAHSF IIKLPDGFDT QVGERGLQLS GGQKQRIAIA RAMLKNPAIL LLDEATSALD SESEKLVQEA
0601: LDRFMIGRTT LIIAHRLSTI RKADLVAVLQ QGSVSEIGTH DELFAKGENG IYSKLIKMQE AAHETAMNNA RKSSARPSSA RNSVSSPIIA RNSSYGRSPY
0701: SRRLSDFSTT DFSLSVEASS YPNYRHDKLP FKDQANSFWR LAKMNSPEWK YALVGSVGSV ICGSLSAFFA YVLSAVLSIY YNPDHNYMIK QIDKYCYLLI
0801: GLSSAALIFN TLQHSFWDIV GENLTKRVRE KMLTAVLKNE MAWFDQEENE SARISARLAL DANNVRSAIG DRISVIVQNT ALMLVACTAG FVLQWRLALV
0901: LVAVFPVVVA ATVLQKMFMT GFSGDLEAAH AKGTQLAGEA IANVRTVAAF NSEAKIVRLY TANLEPPLKR CFWKGQIAGS GYGVAQFCLY ASYALGLWYA
1001: SWLVKHGISD FSKTIRVFMV LMVSANGAAE TLTLAPDFIK GGQAMRSVFE LLDRKTEIEP DDLDTTPVPD RLRGEVELKH IDFSYPSRPD IQVFRDLSLR
1101: ARAGKTLALV GPSGCGKSSV ISLIQRFYEP SSGRVLIDGK DIRKYNLKAI RKHIAIVPQE PCLFGTTIYE NIAYGHECAT EAEIIQAATL ASAHKFISAL
1201: PDGYKTYVGE RGVQLSGGQK QRIAIARALV RKAEIMLLDE ATSALDAESE RSVQEALDQA CSGRTSIVVA HRLSTIRNAH VIAVIDDGKV AEQGSHSHLL
1301: KNYPDGIYAR MIQLQRFTHT QVIGMTSGSS SRVKDDDA
0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
Arabidopsis Description
ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.