Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013936.1-P | Field mustard | plasma membrane | 99.19 | 99.19 |
| CDX89380 | Canola | plasma membrane | 99.27 | 96.08 |
| AT4G25960.1 | Thale cress | plasma membrane | 91.73 | 88.92 |
| CDX92739 | Canola | plasma membrane | 87.84 | 87.35 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 79.66 | 86.61 |
| CDX93393 | Canola | plasma membrane | 79.58 | 80.16 |
| CDY37953 | Canola | plasma membrane | 79.42 | 80.0 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 78.44 | 77.88 |
| KRH74394 | Soybean | plasma membrane | 77.23 | 76.48 |
| KRH39563 | Soybean | peroxisome | 76.99 | 76.31 |
| Solyc08g076720.2.1 | Tomato | unclear | 76.34 | 74.94 |
| PGSC0003DMT400045176 | Potato | peroxisome | 76.09 | 74.7 |
| KRH45417 | Soybean | plasma membrane | 75.69 | 74.48 |
| EES05688 | Sorghum | plasma membrane | 74.64 | 73.1 |
| Zm00001d051514_P002 | Maize | mitochondrion | 74.15 | 72.5 |
| Os02t0693700-02 | Rice | plasma membrane | 73.83 | 72.07 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 73.34 | 71.65 |
| TraesCS6D01G250000.1 | Wheat | golgi | 73.18 | 71.61 |
| TraesCS6A01G264900.3 | Wheat | golgi | 73.26 | 71.41 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 52.51 | 67.78 |
| HORVU6Hr1G067200.1 | Barley | plastid | 73.26 | 66.72 |
| CDX84897 | Canola | cytosol | 6.08 | 63.56 |
| CDX86437 | Canola | cytosol | 7.05 | 58.39 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 3.08 | 55.88 |
| CDX86408 | Canola | plasma membrane | 50.89 | 50.77 |
| CDY00109 | Canola | plasma membrane | 51.05 | 50.6 |
| CDY20012 | Canola | plasma membrane | 51.22 | 50.44 |
| CDY65012 | Canola | plasma membrane | 50.97 | 50.2 |
| CDY27639 | Canola | plasma membrane | 48.7 | 49.34 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 50.08 | 46.19 |
| CDX79704 | Canola | plasma membrane | 49.92 | 45.94 |
| CDX84896 | Canola | plasma membrane | 39.06 | 45.86 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 40.19 | 45.46 |
| CDY25095 | Canola | cytosol | 43.68 | 44.69 |
| CDX67881 | Canola | cytosol | 43.44 | 44.63 |
| CDY27510 | Canola | cytosol | 42.95 | 44.2 |
| CDY48003 | Canola | cytosol | 42.46 | 43.96 |
| CDX80072 | Canola | cytosol | 42.63 | 43.91 |
| CDY15432 | Canola | cytosol | 43.19 | 43.55 |
| CDY24379 | Canola | plasma membrane | 41.09 | 43.37 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 44.25 | 43.2 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 44.25 | 42.99 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 44.0 | 42.96 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 40.6 | 42.75 |
| CDY58790 | Canola | peroxisome | 42.63 | 42.73 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 42.95 | 42.64 |
| CDX86445 | Canola | plasma membrane | 42.87 | 42.52 |
| CDX85192 | Canola | plasma membrane | 42.95 | 41.77 |
| CDY04018 | Canola | plasma membrane | 41.9 | 41.66 |
| CDY51560 | Canola | peroxisome | 42.14 | 41.57 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 36.14 | 40.36 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 29.66 | 37.16 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 41.49 | 36.55 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 41.09 | 36.34 |
| CDY07647 | Canola | cytosol | 41.17 | 36.26 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 41.17 | 36.08 |
| CDY65312 | Canola | cytosol | 40.68 | 35.88 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 40.6 | 35.79 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.78 | 30.56 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078DYH0 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDX94395 | ProteinID:CDX94395 | ProteinID:CDX94395.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00157529001 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0004EDC9D6 | SEG:seg | : | : | : |
Description
BnaC01g17890D
Coordinates
chrLK031881:-:829197..835663
Molecular Weight (calculated)
135628.0 Da
IEP (calculated)
9.494
GRAVY (calculated)
0.134
Length
1234 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEASSDPATK KEKQKATPKV SLLKLFSFAD FYDCVLMTLG SIGACIHGAS VPIFFIFFGK LINIIGLAYL YPHLASHKVA KYSLDFVYLS VAILFSSWLE
0101: VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG NFLHYISRFI AGFAIGFSSV WQISLVTLSI VPLIALAGGI
0201: YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVKLYREAL QNTFKYGRKA GLTKGLGLGS LHCVLFLSWA LLVWFTSVVV HKDIADGGKS
0301: FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER VTAAKTSAKT GRRLGKVDGH IQFKNVTFSY PSRPDVVIFD KLNISIPAGK IVALVGGSGS
0401: GKSTVISLIE RFYEPNSGAV WLDGNDIKDL DIKWLRGQIG LVNQEPALFA TTIRENIMYG KHDATNEELA RAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV HEGKIVEFGN HENLIANPDG AYSALLRLQE
0601: AASLQRNPSL TRTLSRQQSV KYSGDLSRTR TSFCSDRDSV TRQDGAEPTK KTKVTVGRLY SMIRPDWMYG LCGTICAFIA GSQMPLFALG VSHSLVSYYE
0701: KDWVDTQKEV KKIAILFCCA SAITLIVYTI EHICFGTMGE RLTLRVREKM FSAILRNEIG WFDEVDNTSS MLASRLESDA TLLKTIVVDR STILLQNLGL
0801: VVTSFVISFM LNWRLTLVVV ATFPLVISGH ISEKLFMQGY GGNLSKAYLK ANMLAGESVS NIRTVAAFCA EDKILELYSR ELLEPSKRSF RRGQTAGLFY
0901: GISQFFIFSS YGLALWYGST LMDKGLSNFK SVMKTFMVLI VTALAMGETL ALAPDLLKGN QMVASVFEIL DRKTQIVGET SEELTNVEGM IELKGVHFSY
1001: PSRPDVVIFK DFDLKVRSGK SMALVGQSGS GKSSVISLIL RFYDPTAGKV MIEGKDIKKL DLKALRKHIG LVQQEPALFA TTIYENILYG NERATQSEVI
1101: EAATLANAHS FITSLPQGYS TKVGERGVQM SGGQRQRIAI ARAILRNPEI LLLDEATSAL DIESERVVQQ ALDRLMTNRT TVVVAHRLST IQNADTISVL
1201: HGGKIVEQGS HHRLVQNKTG PYFKLISLQQ QQHP
0101: VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG NFLHYISRFI AGFAIGFSSV WQISLVTLSI VPLIALAGGI
0201: YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVKLYREAL QNTFKYGRKA GLTKGLGLGS LHCVLFLSWA LLVWFTSVVV HKDIADGGKS
0301: FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER VTAAKTSAKT GRRLGKVDGH IQFKNVTFSY PSRPDVVIFD KLNISIPAGK IVALVGGSGS
0401: GKSTVISLIE RFYEPNSGAV WLDGNDIKDL DIKWLRGQIG LVNQEPALFA TTIRENIMYG KHDATNEELA RAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV HEGKIVEFGN HENLIANPDG AYSALLRLQE
0601: AASLQRNPSL TRTLSRQQSV KYSGDLSRTR TSFCSDRDSV TRQDGAEPTK KTKVTVGRLY SMIRPDWMYG LCGTICAFIA GSQMPLFALG VSHSLVSYYE
0701: KDWVDTQKEV KKIAILFCCA SAITLIVYTI EHICFGTMGE RLTLRVREKM FSAILRNEIG WFDEVDNTSS MLASRLESDA TLLKTIVVDR STILLQNLGL
0801: VVTSFVISFM LNWRLTLVVV ATFPLVISGH ISEKLFMQGY GGNLSKAYLK ANMLAGESVS NIRTVAAFCA EDKILELYSR ELLEPSKRSF RRGQTAGLFY
0901: GISQFFIFSS YGLALWYGST LMDKGLSNFK SVMKTFMVLI VTALAMGETL ALAPDLLKGN QMVASVFEIL DRKTQIVGET SEELTNVEGM IELKGVHFSY
1001: PSRPDVVIFK DFDLKVRSGK SMALVGQSGS GKSSVISLIL RFYDPTAGKV MIEGKDIKKL DLKALRKHIG LVQQEPALFA TTIYENILYG NERATQSEVI
1101: EAATLANAHS FITSLPQGYS TKVGERGVQM SGGQRQRIAI ARAILRNPEI LLLDEATSAL DIESERVVQQ ALDRLMTNRT TVVVAHRLST IQNADTISVL
1201: HGGKIVEQGS HHRLVQNKTG PYFKLISLQQ QQHP
0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
Arabidopsis Description
ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.