CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15432	Canola	cytosol	94.7	97.79
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	92.17	91.16
CDX89963	Canola	cytosol, nucleus, plasma membrane	90.9	90.9
CDY15249	Canola	cytosol, peroxisome, plasma membrane	90.9	90.47
CDY24379	Canola	plasma membrane	71.84	77.67
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	71.44	77.05
CDY58790	Canola	peroxisome	73.5	75.47
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	65.59	74.95
CDY51560	Canola	peroxisome	73.58	74.34
CDY27510	Canola	cytosol	70.25	74.06
CDY25095	Canola	cytosol	70.25	73.63
CDX67881	Canola	cytosol	69.94	73.61
Os05t0137200-01	Rice	plasma membrane	22.86	73.54
CDY48003	Canola	cytosol	69.15	73.32
CDX80072	Canola	cytosol	69.38	73.21
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.0	73.09
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	73.58	72.54
CDY37776	Canola	cytosol, peroxisome, plasma membrane	71.28	72.49
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	73.42	72.39
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	73.1	71.79
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	71.36	70.3
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.65	69.28
GSMUA_Achr1P25070_001	Banana	plasma membrane	49.37	68.87
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	65.9	68.73
OQU77362	Sorghum	mitochondrion, plasma membrane	61.31	67.16
KXG32330	Sorghum	plastid	67.88	67.03
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	67.72	66.98
Solyc06g009290.2.1	Tomato	nucleus	73.18	66.07
TraesCS1A01G081300.1	Wheat	unclear	64.95	64.34
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	64.87	64.26
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	64.79	64.24
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	67.56	63.97
HORVU1Hr1G017460.3	Barley	plasma membrane	64.64	63.68
CDY35168	Canola	golgi, peroxisome, plasma membrane	54.11	62.69
GSMUA_Achr9P16700_001	Banana	plasma membrane	61.16	60.87
CDX84897	Canola	cytosol	5.54	59.32
CDX86437	Canola	cytosol	6.96	59.06
CDX86442	Canola	cytosol, mitochondrion, plastid	2.93	54.41
CDY00109	Canola	plasma membrane	44.3	44.98
CDX86408	Canola	plasma membrane	43.91	44.87
CDY65012	Canola	plasma membrane	44.22	44.61
CDX93393	Canola	plasma membrane	43.2	44.57
CDY20012	Canola	plasma membrane	44.15	44.53
CDY37953	Canola	plasma membrane	43.12	44.49
CDX94395	Canola	plasma membrane	42.96	44.0
CDX92739	Canola	plasma membrane	43.12	43.92
CDY27639	Canola	plasma membrane	41.85	43.43
CDX89380	Canola	plasma membrane	43.04	42.67
CDX86445	Canola	plasma membrane	41.53	42.2
CDX85192	Canola	plasma membrane	41.46	41.29
CDY04018	Canola	plasma membrane	40.51	41.26
CDY42770	Canola	golgi, plasma membrane, vacuole	36.95	41.15
CDY46744	Canola	cytosol, peroxisome, plasma membrane	42.96	40.58
CDX79704	Canola	plasma membrane	43.04	40.57
CDX84896	Canola	plasma membrane	33.23	39.96
CDY64952	Canola	peroxisome, plasma membrane, vacuole	28.24	36.24
CDY24958	Canola	mitochondrion, plasma membrane, plastid	38.37	34.77
CDY07647	Canola	cytosol	38.45	34.69
CDY20443	Canola	cytosol, mitochondrion, plasma membrane	38.21	34.48
CDY65312	Canola	cytosol	37.97	34.31
CDY53591	Canola	cytosol, mitochondrion, plasma membrane	38.13	34.23
CDX76106	Canola	cytosol, golgi, peroxisome	37.9	34.21
CDY21871	Canola	endoplasmic reticulum, plasma membrane	1.5	26.39

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	GO:A0A078IN07	UniProt:A0A078IN07	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY51307	ProteinID:CDY51307
ProteinID:CDY51307.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00003118001	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0004EE9587	SEG:seg	:	:

Description

BnaCnng20520DBnaCnng20520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN07]

Coordinates

chrLK032983:-:81049..85671

Molecular Weight (calculated)

136054.0 Da

IEP (calculated)

8.225

GRAVY (calculated)

0.157

Length

1264 amino acids

Sequence
(BLAST)

0001: MNRDGAGAGN SVSHEPSTSK TPREGGEEET KKDEKAKTVP FYKLFAFADS YDVLLMICGS VGAMGNGVGL PLMTLLFGDL IDSFGQNQNN KDIVDVISKV
0101: CVKFVYLGLG TLGAAFLQVA CWMITGERQA ARIRNMYLKT ILRQDIGFFD VETNTGEVVG RMSGDTVLIQ EAMGEKVGKF IQLIATFIGG FALAFAKGWL
0201: LTLVMLTSIP LLAMAGAAMA IIVTKASSQG QAAYAKAATV VEQTIGSIRT VASFTGEKEA INKYKKFITS AYKSSIQQGF STGLGLGIML FVLFSSYALA
0301: IWFGGKMILE KGYTGGAVIN VLIIVVAGAM SLGQTSPCVT AFSAGQSAAY KMFETIERKP LIDAYDLKGK ILKDIRGDIE LKDVHFSYPA RPDEDIFDGF
0401: SLFIPSGATA ALVGESGSGK STVISLIERF YDPKAGQVLI DGVNLKEFQL KWIRSKIGLV SQEPVLFSSS IMENIAYGKD NATIQEIKAA TELANAAKFI
0501: DKLPQGLDTM VGEHGTQLSG GQKQRIAIAR AILKDPRILL LDEATSALDA ESERVVQEAL DRVMVNRTTV IVAHRLSTVR NADMIAVIHR GKMVEKGSHS
0601: ELLRDPEGAY SQLIRLQEIN KDAKAASGSS FRNSSLKKSI EGSSSSVGNS SRHHSLNVVT SGLEHEDKPG TEAQEPVPKV SLTRIAALNK PEIPVLLLGT
0701: VAAAINGAIF PLFGILISRV IEAFFKPAHE LRRDSKFWAL IFVALGVVSF IISPTQMYLF AVAGGKLIRR IRSMCFEKAV HMEVGWFDEP QNSSGTLGAR
0801: LSADAALIRA LVGDALSLAV QNAASAASGL IIAFTACWEL ALIILVMLPL IGINGYIQVK FMKGFTADAK SKYEDASQVA NDAVGSIRTV ASFCAEEKVM
0901: QMYKKQCEGP IKDGIKQGFI SGLGFGFSFF ILFCVYAASF YAGARLVEAG RTTFNDVFQV FFALTMAAIG ISQSSSFAPD SSKAKVAAAS IFGIIDRKSK
1001: IDSSDESGTV LENVKGDIEL RHISFTYPAR PDIQIFRDLC LTIRAGKTVA LVGESGSGKS TVISLLQRFY DPDSGHITLD GVELKKMQLK WLRQQMGLVG
1101: QEPVLFNDTI RANIAYGKGS EEAATESEIT AAAELANAHK FISSIQQGYD TVVGERGIQL SGGQKQRVAI ARAIVKEPKI LLLDEATSAL DAESERVVQD
1201: ALDRVMVNRT TVVVAHRLST IKNADVIAVV KNGVIAEKGT HETLIKMEGG VYASLVQLHM TASN

Best Arabidopsis Sequence Match ( AT1G02520.3 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.