Factsheet for TraesCS1D01G082900.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G081300.1	Wheat	unclear	98.82	98.82
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	98.75	98.82
HORVU1Hr1G017460.3	Barley	plasma membrane	97.57	97.04
Os05t0137200-01	Rice	plasma membrane	27.19	88.3
OQU77362	Sorghum	mitochondrion, plasma membrane	78.37	86.66
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	64.42	74.32
PGSC0003DMT400011703	Potato	cytosol	9.72	74.25
GSMUA_Achr1P25070_001	Banana	plasma membrane	50.16	70.64
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	67.71	67.39
CDY25095	Canola	cytosol	63.32	67.0
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	67.24	66.93
CDX67881	Canola	cytosol	62.93	66.86
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.87	66.77
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	66.07	66.17
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	66.69	66.12
CDY48003	Canola	cytosol	61.6	65.94
CDY27510	Canola	cytosol	61.91	65.89
CDX80072	Canola	cytosol	61.76	65.78
KRH02481	Soybean	plasma membrane	65.44	65.49
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.14	65.22
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	65.36	65.0
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	65.75	64.94
CDY51307	Canola	cytosol, peroxisome, plasma membrane	64.26	64.87
CDY37776	Canola	cytosol, peroxisome, plasma membrane	63.09	64.76
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	65.75	64.74
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.36	64.7
CDY15432	Canola	cytosol	61.99	64.62
Bra004484.1-P	Field mustard	cytosol	64.97	64.56
CDX89963	Canola	cytosol, nucleus, plasma membrane	63.87	64.48
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	64.89	64.39
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.19	64.19
CDY15249	Canola	cytosol, peroxisome, plasma membrane	63.71	64.02
Bra040475.1-P	Field mustard	cytosol	64.5	63.95
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	64.03	63.93
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	60.42	63.61
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	62.85	63.35
CDY24379	Canola	plasma membrane	57.76	63.05
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	60.5	62.76
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	60.27	62.57
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	57.21	62.29
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.8	61.98
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	62.3	61.01
Bra003445.1-P	Field mustard	peroxisome	59.56	60.61
Solyc06g009290.2.1	Tomato	nucleus	66.46	60.57
CDY58790	Canola	peroxisome	58.07	60.2
KRH19480	Soybean	plasma membrane	56.35	59.62
CDY51560	Canola	peroxisome	58.15	59.31
KRH02484	Soybean	plasma membrane	58.39	58.85
TraesCS3D01G257500.1	Wheat	plasma membrane	57.92	58.84
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	58.39	58.25
Solyc12g098840.1.1	Tomato	peroxisome	58.31	58.12
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	41.3	57.98
PGSC0003DMT400011930	Potato	peroxisome	58.23	57.73
TraesCS3D01G257900.1	Wheat	peroxisome	56.66	57.29
KRH19479	Soybean	plasma membrane	58.07	57.04
TraesCS2D01G010400.1	Wheat	plasma membrane	55.64	56.66
TraesCS3D01G258100.1	Wheat	plasma membrane	55.49	56.64
TraesCS2D01G010500.1	Wheat	plasma membrane	55.8	56.6
Solyc11g067300.1.1	Tomato	plasma membrane	55.09	55.79
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	54.7	55.0
TraesCS3D01G258200.2	Wheat	peroxisome	53.92	54.65
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	54.0	54.47
PGSC0003DMT400019085	Potato	plasma membrane	53.21	52.47
TraesCS2D01G523100.2	Wheat	cytosol	43.73	43.9
TraesCS2D01G322600.1	Wheat	cytosol, peroxisome, plasma membrane	43.03	43.47
TraesCS6D01G250000.1	Wheat	golgi	42.87	43.38
TraesCS7D01G068400.1	Wheat	plasma membrane	40.44	41.88
TraesCS7D01G284100.1	Wheat	cytosol	42.95	39.85
TraesCS2D01G339000.1	Wheat	plasma membrane	38.32	38.72
TraesCS7D01G298600.1	Wheat	peroxisome	37.54	38.08
TraesCS7D01G298400.1	Wheat	peroxisome	36.36	36.71
TraesCS6D01G131900.1	Wheat	plasma membrane	35.81	36.41
TraesCS4D01G203900.2	Wheat	cytosol, plasma membrane, plastid	38.95	35.27
TraesCS3D01G541700.1	Wheat	cytosol, plasma membrane, vacuole	38.56	34.97
TraesCS4D01G296900.1	Wheat	peroxisome	38.71	32.93

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G082900	EnsemblPlants:TraesCS1D01G082900.2	TIGR:cd03249	SEG:seg

Description

No Description!

Coordinates

chr1D:+:66090989..66096685

Molecular Weight (calculated)

136643.0 Da

IEP (calculated)

7.477

GRAVY (calculated)

0.152

Length

1276 amino acids

Sequence
(BLAST)

0001: MSESSRAFNV DGAGQPADGA RGGGKRRPGA GGGGSVPFHR LFAFADGADA ALMLVGAVGA VANGAALPLM TVLFGGLVDA FGGAAGGSGD VLARVSQVSL
0101: EFVYLAIASA VASFAQVTCW MITGERQAAR IRNMYLRTIL RQEISFFDMY TSTGEVVGRM SGDTVLIQDA MGEKVGKFIQ LMVTFFGGFA VAFAQGWLLT
0201: LVMVATIPPL VLSGAVMSNV VARMASLGQA AYAEAAVVVE QTVGSIRTVA SFTGEKKAVE KYNKSLKCAY SSGVREGLVA AIGMGTVMML LFCGYSLGVW
0301: YGAKLILEKG YTGAQVMNVI FAVLTGSLAL GQASPSMKAF AGGQAAAYKM FETINREPEI DAYSTEGRML DDIQGDIEFR DVHFSYPTRP NEQIFRGFSL
0401: TIQSAKTVAL VGQSGSGKST VISLIERFYD PQLGEVLIDG VNIKELQLKW IRSKIGLVSQ EPALFAASIR DNIAYGKDNA TDQEIRAAAE LANASKFIDK
0501: LPQGFTTSVG EHGTQLSGGQ KQRIAIARAI LKDPRILLLD EATSALDTES ERIVQEALDR VMTNRTTVIV AHRLTTVRNA DTIAVICRGS IVEKGPHHDL
0601: LRDPEGAYSQ LIRLQETSHA SEGASNQNKS GRKSDTGIRL GKQLLVNQSN SQRSSRDNSS HHSFSVPFGI PHEIDVQVGC SKNITDEIQQ EVPLSRLASL
0701: NKPEVPVLIL GSVASAISGV IFPIFAILLS NVIKAFYEPP EMLKKDAAFW SSMFLIFGAV YFVSLPVGSY FFSVAGCKLI RRIRLMTFEK VVNMEIGWFD
0801: DPHNSSGSIG SRLSSDAAKV RGLVGDTLQL VVQNSATLVA GLVIAFVSNW ELSLIILALI PLIGLNGWIQ MKFIQGFSAD AKMMYEEASQ VANDAVSSIR
0901: TVASFSAEEK VMDLYNKKCE GPLQTGIRTG IISGIGFGVS FFLLFGVYAA SFYAGARLVE DKKTTFPKVF RVFLALTMAA IGVSHTSTLT SDSSRARSAV
1001: SSIFAIVDRK SMIDPSDDAG VNLEPLRGDI EFRHVRFRYP TRPDIQIFED LCLTIQSGKT VALVGESGSG KSTAIALLQR FYDPDAGHIL LDGVDIQKFQ
1101: VRWLRQQMGL VSQEPALFND TIRANIAYGK EGEATESDIV SAAQLANAHK FISSLHQGYD TVVGERGAQL SGGQKQRVAI ARAVAKDPRI LLLDEATSAL
1201: DAESERAVQD ALDRVAASRT TVVVAHRLST VRGADVIAVV KDGAIVERGT HDALIAVKGG AYASLVALHS ASSASS

Best Arabidopsis Sequence Match ( AT3G62150.3 )
(BLAST)

0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST

Arabidopsis Description

ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.