Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g067300.1.1 | Tomato | plasma membrane | 71.56 | 73.49 |
| PGSC0003DMT400011703 | Potato | cytosol | 8.11 | 62.87 |
| GSMUA_Achr8P29860_001 | Banana | endoplasmic reticulum | 51.0 | 59.67 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 57.96 | 58.28 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 53.94 | 57.59 |
| Os05t0137200-01 | Rice | plasma membrane | 17.31 | 57.0 |
| GSMUA_Achr1P25070_001 | Banana | plasma membrane | 38.79 | 55.41 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 49.23 | 55.2 |
| KXG32330 | Sorghum | plastid | 53.4 | 53.98 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 52.47 | 53.21 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 52.55 | 53.21 |
| TraesCS1A01G081300.1 | Wheat | unclear | 52.4 | 53.13 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.32 | 53.1 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 52.09 | 52.53 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 50.62 | 51.9 |
| PGSC0003DMT400011930 | Potato | peroxisome | 51.08 | 51.36 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 52.63 | 51.01 |
| GSMUA_Achr9P16700_001 | Banana | plasma membrane | 49.46 | 50.39 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 48.3 | 49.64 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 39.26 | 40.67 |
| PGSC0003DMT400045176 | Potato | peroxisome | 39.34 | 40.49 |
| PGSC0003DMT400048379 | Potato | golgi, peroxisome, plasma membrane | 35.39 | 40.28 |
| PGSC0003DMT400049576 | Potato | plasma membrane | 37.17 | 38.2 |
| PGSC0003DMT400027962 | Potato | golgi, plasma membrane, vacuole | 36.94 | 38.12 |
| PGSC0003DMT400013988 | Potato | plasma membrane | 35.78 | 37.77 |
| PGSC0003DMT400009924 | Potato | peroxisome | 37.94 | 36.83 |
| PGSC0003DMT400069516 | Potato | peroxisome | 33.69 | 36.76 |
| PGSC0003DMT400058977 | Potato | plastid | 37.09 | 31.43 |
Protein Annotations
| MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | UniProt:M1ABL1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | EnsemblPlantsGene:PGSC0003DMG400007399 |
| PGSC:PGSC0003DMG400007399 | EnsemblPlants:PGSC0003DMT400019085 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 |
| PANTHER:PTHR24221:SF292 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0002961062 |
| SEG:seg | : | : | : | : | : |
Description
P-glycoprotein 21 [Source:PGSC_GENE;Acc:PGSC0003DMG400007399]
Coordinates
chr11:-:40240421..40248719
Molecular Weight (calculated)
142474.0 Da
IEP (calculated)
8.382
GRAVY (calculated)
0.110
Length
1294 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSNNNYSVKK ENEIKKERSI NIINTIPFYK LFSFADNIDK ILMFLGTIGA FGTGLCQVIV PLLFGKLVDA FGLNLTSVVL QEVSKVSLKL VCLGIGSGVS
0101: ATLQVGCWTL TAERQAARLR VLYLKSVLRQ EVSFFDKEVN TGEVIGKMSG DIFIIQDAMG DKVGKMIRCI TMFIGAFSIA FTKGWLLALV MVSPVVPLII
0201: VVGVMFLLMS RQASQSHKAY SKAANVVEQT LGSIRTVASF TGEKQAFEEY NKSLQKAYKS GIHEGLANGL GLGLSQFILF CNYALAFWYG GKMILEKGYT
0301: GGSVLTITLA MLNASMSIGE VSPCFAAFTA GKAAAYKMFE TINRNSEIDV YNNSGIILDD IRGDIELKHV CFSYPSRSTE RILNEFSLLI PSGKSTALVG
0401: GSGSGKSTII SLIERFYDPQ SGEIFIDGRN LKDFQVKWIR QKIALVSQEP TLFSTSIKEN VAYGKDGATK EEIEAAIEIA NASKFINRLP EGIETNVGER
0501: GTQLSGGQKQ RIAIARAILK DPRILLLDEA TSALDAESES LVQEALDKIM VDRTTIIVAH RLSTVRNADN IAVIHRGTIV EEGKHFELLK DPEGAYSQLI
0601: RLQEVNQEKE QLCLDDSQLL STESRPEYSE NYDTTEVKGI PETILPKSSD ANLEVSKNLD KGHIIRLAHL NKPEFPILLV GAVVAIVSGS VLPVCGLIFS
0701: NILKSFYEPP DELKKDSQFW SLMIVVLGTV LLISSPLETL IFTMAGCKLI QRIRLMCFQK AVHMEIGWSD EPENSVGVIA TKLSTDATIV RVLVGDILAK
0801: ITKDLAAAII GIVIAFRASW LLSLIILAMV PFMMVSIYVQ NKFAKRFGTD AKKYEKASRV VNDAVSNIRT VVSFCVEEKV VELYEKESDV PIMTATRKEM
0901: ISGISYGITS SLIFLVYAAS GYAGAHLVDN GTISSSATFR VILAVFLTSV VISRSTFMND FTKAKTAAAS IFSILDRNSK IDSSKQDGLT LDQSKGDIEF
1001: KQVCFAYPTR PNIQVLNGFS LKISSGQTVA LVGESGCGKS TVISLLQRYY NFGSGQIMLD GIDIQNFNLK WLRHQMGLVS QEPILFNNTI RANIMYGKEA
1101: GDASEAELIA AAKLANAHKF ISSLQQGYDT MVGERGAQLS GGQKQRIAIA RAILKNPIIL LLDEATSALD AESERMVQMA LEKIMVNRTA IIIAHRLSTI
1201: KEAESPQHPN KIKLETQNNR VLWKARRLTT DSGVLSWVND VQEVDPGYLC LHRHKMQANW HQYIECTNMR AGKLTTIKAW KEYMRTLTLA LFNS
0101: ATLQVGCWTL TAERQAARLR VLYLKSVLRQ EVSFFDKEVN TGEVIGKMSG DIFIIQDAMG DKVGKMIRCI TMFIGAFSIA FTKGWLLALV MVSPVVPLII
0201: VVGVMFLLMS RQASQSHKAY SKAANVVEQT LGSIRTVASF TGEKQAFEEY NKSLQKAYKS GIHEGLANGL GLGLSQFILF CNYALAFWYG GKMILEKGYT
0301: GGSVLTITLA MLNASMSIGE VSPCFAAFTA GKAAAYKMFE TINRNSEIDV YNNSGIILDD IRGDIELKHV CFSYPSRSTE RILNEFSLLI PSGKSTALVG
0401: GSGSGKSTII SLIERFYDPQ SGEIFIDGRN LKDFQVKWIR QKIALVSQEP TLFSTSIKEN VAYGKDGATK EEIEAAIEIA NASKFINRLP EGIETNVGER
0501: GTQLSGGQKQ RIAIARAILK DPRILLLDEA TSALDAESES LVQEALDKIM VDRTTIIVAH RLSTVRNADN IAVIHRGTIV EEGKHFELLK DPEGAYSQLI
0601: RLQEVNQEKE QLCLDDSQLL STESRPEYSE NYDTTEVKGI PETILPKSSD ANLEVSKNLD KGHIIRLAHL NKPEFPILLV GAVVAIVSGS VLPVCGLIFS
0701: NILKSFYEPP DELKKDSQFW SLMIVVLGTV LLISSPLETL IFTMAGCKLI QRIRLMCFQK AVHMEIGWSD EPENSVGVIA TKLSTDATIV RVLVGDILAK
0801: ITKDLAAAII GIVIAFRASW LLSLIILAMV PFMMVSIYVQ NKFAKRFGTD AKKYEKASRV VNDAVSNIRT VVSFCVEEKV VELYEKESDV PIMTATRKEM
0901: ISGISYGITS SLIFLVYAAS GYAGAHLVDN GTISSSATFR VILAVFLTSV VISRSTFMND FTKAKTAAAS IFSILDRNSK IDSSKQDGLT LDQSKGDIEF
1001: KQVCFAYPTR PNIQVLNGFS LKISSGQTVA LVGESGCGKS TVISLLQRYY NFGSGQIMLD GIDIQNFNLK WLRHQMGLVS QEPILFNNTI RANIMYGKEA
1101: GDASEAELIA AAKLANAHKF ISSLQQGYDT MVGERGAQLS GGQKQRIAIA RAILKNPIIL LLDEATSALD AESERMVQMA LEKIMVNRTA IIIAHRLSTI
1201: KEAESPQHPN KIKLETQNNR VLWKARRLTT DSGVLSWVND VQEVDPGYLC LHRHKMQANW HQYIECTNMR AGKLTTIKAW KEYMRTLTLA LFNS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.