Factsheet for PGSC0003DMT400007960

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g071350.2.1	Tomato	plastid	98.1	98.02
VIT_10s0003g02540.t01	Wine grape	plasma membrane	74.8	76.69
Bra012621.1-P	Field mustard	plasma membrane	73.3	74.18
TraesCS6B01G145800.1	Wheat	cytosol	14.82	73.91
Os01t0695800-01	Rice	plasma membrane	15.06	72.52
PGSC0003DMT400011703	Potato	cytosol	9.59	72.46
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	31.22	72.29
AT4G18050.2	Thale cress	plasma membrane	71.24	72.15
KRH21125	Soybean	plasma membrane	71.55	71.61
VIT_10s0003g02570.t01	Wine grape	plasma membrane	69.89	71.19
KRH11119	Soybean	plasma membrane	69.33	70.17
CDY35168	Canola	golgi, peroxisome, plasma membrane	60.14	69.57
VIT_10s0003g02580.t01	Wine grape	plasma membrane	68.94	68.77
AT5G46540.1	Thale cress	golgi	66.48	67.23
PGSC0003DMT400034908	Potato	plasma membrane	65.45	65.61
Bra017539.1-P	Field mustard	plasma membrane	53.25	65.18
GSMUA_Achr2P20180_001	Banana	plasma membrane	50.08	64.82
HORVU3Hr1G021600.2	Barley	peroxisome, plasma membrane, vacuole	58.4	64.03
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	58.64	63.68
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	64.42	63.17
Os05t0548300-01	Rice	plasma membrane	28.61	62.03
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	44.53	61.83
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	61.33	61.72
TraesCS3A01G257500.1	Wheat	plasma membrane	61.25	61.5
TraesCS3D01G257500.1	Wheat	plasma membrane	61.17	61.47
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	58.8	61.22
TraesCS3B01G290300.2	Wheat	peroxisome	61.33	61.09
KXG33192	Sorghum	cytosol	61.33	60.99
Zm00001d043762_P001	Maize	cytosol	61.49	60.96
HORVU2Hr1G001630.2	Barley	plasma membrane	59.19	59.52
HORVU2Hr1G001530.10	Barley	plasma membrane	59.19	59.52
TraesCS2B01G012300.1	Wheat	plasma membrane	58.95	59.14
KXG35311	Sorghum	plasma membrane	58.8	59.12
TraesCS3D01G258100.1	Wheat	plasma membrane	58.4	58.96
TraesCS3D01G257900.1	Wheat	peroxisome	58.95	58.95
TraesCS2D01G010500.1	Wheat	plasma membrane	58.64	58.82
TraesCS2A01G009900.1	Wheat	plasma membrane	58.64	58.82
HORVU3Hr1G065320.47	Barley	plasma membrane	59.03	58.52
TraesCS3A01G258200.1	Wheat	peroxisome	57.92	58.48
TraesCS2B01G012100.3	Wheat	plasma membrane	57.92	58.34
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	38.59	58.32
KXG32655	Sorghum	peroxisome	59.51	58.17
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	58.95	58.17
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	58.87	58.14
TraesCS2A01G009600.1	Wheat	plasma membrane	57.69	58.1
HORVU3Hr1G065280.1	Barley	plasma membrane	58.08	58.08
HORVU6Hr1G021320.43	Barley	peroxisome	58.16	58.02
TraesCS3A01G369700.1	Wheat	peroxisome	58.8	57.97
TraesCS2D01G010400.1	Wheat	plasma membrane	57.53	57.94
TraesCS6B01G145600.1	Wheat	peroxisome	58.0	57.91
Zm00001d005528_P001	Maize	plasma membrane	55.15	57.86
Zm00001d009447_P002	Maize	plasma membrane	57.92	57.83
Os05t0548500-00	Rice	plasma membrane	57.69	57.78
Os01t0534700-00	Rice	plasma membrane	50.63	57.78
Zm00001d011644_P002	Maize	plasma membrane	58.64	57.59
TraesCS2B01G012200.1	Wheat	golgi	48.89	57.18
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	56.97	56.88
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	59.51	56.76
TraesCS5A01G495900.1	Wheat	plasma membrane	56.34	56.12
TraesCS1B01G387400.1	Wheat	peroxisome	56.02	55.89
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	56.02	55.89
Os01t0695700-00	Rice	plasma membrane	56.1	55.88
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	56.02	55.71
TraesCS3A01G258000.1	Wheat	mitochondrion	58.48	55.66
HORVU1Hr1G078450.24	Barley	plasma membrane	55.78	55.65
PGSC0003DMT400011930	Potato	peroxisome	56.5	55.4
TraesCS3A01G258400.3	Wheat	peroxisome	54.99	55.17
HORVU3Hr1G065240.14	Barley	cytosol	55.86	55.08
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	55.15	55.02
TraesCS3B01G291100.3	Wheat	peroxisome	55.07	54.98
TraesCS3B01G290700.1	Wheat	peroxisome	45.64	54.96
TraesCS3D01G258200.2	Wheat	peroxisome	54.75	54.88
EES01319	Sorghum	cytosol	55.15	54.63
TraesCS3B01G291000.1	Wheat	peroxisome	54.44	54.61
Zm00001d043766_P005	Maize	cytosol	54.6	53.91
Os02t0323000-01	Rice	cytosol, peroxisome	18.07	53.9
PGSC0003DMT400019085	Potato	plasma membrane	51.9	50.62
PGSC0003DMT400045176	Potato	peroxisome	44.29	44.47
PGSC0003DMT400003590	Potato	plasma membrane	43.42	43.88
PGSC0003DMT400048379	Potato	golgi, peroxisome, plasma membrane	37.56	41.69
PGSC0003DMT400009924	Potato	peroxisome	43.66	41.34
PGSC0003DMT400013988	Potato	plasma membrane	38.91	40.05
PGSC0003DMT400027962	Potato	golgi, plasma membrane, vacuole	39.7	39.95
PGSC0003DMT400049576	Potato	plasma membrane	39.3	39.4
PGSC0003DMT400069516	Potato	peroxisome	36.37	38.7
OQU78384	Sorghum	plasma membrane	57.77	38.65
PGSC0003DMT400058977	Potato	plastid	40.17	33.2

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:102585402	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M0ZTT9	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00664	EnsemblPlantsGene:PGSC0003DMG400003078	PGSC:PGSC0003DMG400003078	EnsemblPlants:PGSC0003DMT400007960	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF204	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	UniParc:UPI0002960224	RefSeq:XP_006355579.1	SEG:seg	:	:

Description

MDR-like ABC transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400003078]

Coordinates

chr2:+:30568274..30576228

Molecular Weight (calculated)

136969.0 Da

IEP (calculated)

7.419

GRAVY (calculated)

0.129

Length

1262 amino acids

Sequence
(BLAST)

0001: MEDNNNGEKK GDEDQKVSFY KLFSFADKFD VALMIIGTIG AIGNGLTQPL MTLIFGQLVN SFGSSNSDEV VHKISKVSID YVYLAIGAGV ASLLQMSCWM
0101: VTGERQATRI RGLYLKTILR QDIAFFDTET TTGEVIGRMS GDTILIQDAL GEKVGKFIQF ISTFVGGFVV AFFKGWLLSI VLVSCIPALV IAGGAMALIM
0201: SKMSSRGQVA YAQAGNVVEQ TIGAIRTVSA FTGEKLAIDK YDSKLKIACA STVQQGLVSG VGLGTVLLIV FSTYGLAVWY GSKLIIERGY NGGDVINVIM
0301: AIMTGGMSLG QTTPSLNAFA AGQAAAYKMF ETINRKPLID TSDTNGVVLE NIKGEIELKD VYFRYPARPD VQIFSGFSLI VPNGKTVALV GQSGSGKSTV
0401: ISLLERFYDP EAGEVLIDGV NLKKFQLKWL RQQMGLVSQE PILFATTIKE NISYGKENAT EDEIKTAIEL ANAAKFLDKL PQGLDTMVGE HGTQLSGGQK
0501: QRLAIARAIL KNPRILLLDE ATSALDAESE RIVQEALEKV MANRTTVVVA HRLTTIRNAD LIAVVNAGKL IEKGTHTELI QDPNGAYSQL VRMQGGNREE
0601: ENMKNMDLEK VDLTTDLDNN LSRSSSQQLS AMRRSTSQGS SRHSFTLNYT VPGLVGIHEA EIGDEDKQKE DKGSLKKRKN VSIRRLAGLN KPELPYLLLG
0701: SLAAIIHGLI FPLFGLLLST AIKIFFYPPQ KLRSESRFWA LMYFGLGVVT LLVVPFQNYL FGVAGGKLIE RIRSLTFKKV VHQEISWFDD PAHSSGAIGA
0801: RLSTDASTVR TLMGDALALI VQNIATVVAG LVIAFTANWI LALIILLVMP LIGVQGFLQT KMYKGFSADA KVMYEEASQI ANDAVGSIRT VASFCAEEKV
0901: MDMYQKKCEG PMKQGVKIGI VSGASLGFGS FILYCTNAFC FYIGSILIQH GLASFGQVFK VFFALTLSAV GVTQSTGMAP DASKAKDSIA SIFDILDRKP
1001: EIDSSSDVGT TLAAVRGDIE FKHVSYRYAT RPDVQIFKDL CLTIPSGKTV ALVGESGSGK STVISLIERF YNPESGSIYL DGVEIRQFKL SWLRQQMGLV
1101: SQEPVLFNET IRDNIAYSRQ GHATEEEIIE AAKSANAHNF ISSLPQGYDT SVGERGIQLS GGQKQRIAIA RAILKDPKIL LLDEATSALD AESERIVQEA
1201: LDRVMVNRTT VVVAHRLTTI KGADVIAVVK NGVIAEEGRH DALMNIKDGV YASLVALHMT SA

Best Arabidopsis Sequence Match ( AT4G18050.1 )
(BLAST)

0001: MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV AFLQVSCWMV
0101: TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI AGAAMSLIMS
0201: KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN GGQVINVIFA
0301: VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG QSGSGKSTVI
0401: SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH GTQMSGGQKQ
0501: RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV RLQEGSKEEA
0601: TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS IAAMVHGTVF
0701: PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA LALIVQNIAT
0801: VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV RLGLLSGAGF
0901: GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN GDIEFRHVSF
1001: RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA YGKTGGATEE
1101: EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR LTTIKNADVI
1201: AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN

Arabidopsis Description

PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.