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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35168 Canola golgi, peroxisome, plasma membrane 72.04 82.4
Bra017539.1-P Field mustard plasma membrane 65.14 78.86
AT4G18050.2 Thale cress plasma membrane 73.32 73.44
Os01t0695800-01 Rice plasma membrane 15.22 72.52
TraesCS6B01G145800.1 Wheat cytosol 14.66 72.33
VIT_10s0003g02540.t01 Wine grape plasma membrane 67.31 68.24
PGSC0003DMT400007960 Potato plasma membrane 67.23 66.48
Solyc02g071350.2.1 Tomato plastid 67.23 66.43
VIT_10s0003g02570.t01 Wine grape plasma membrane 65.46 65.94
VIT_10s0003g02550.t01 Wine grape cytosol, nucleus, peroxisome 28.45 65.14
KRH11119 Soybean plasma membrane 64.74 64.8
KRH21125 Soybean plasma membrane 65.38 64.71
VIT_10s0003g02580.t01 Wine grape plasma membrane 63.78 62.92
Solyc02g071340.1.1 Tomato plasma membrane 63.38 62.63
Os05t0548300-01 Rice plasma membrane 28.04 60.14
GSMUA_Achr2P20180_001 Banana plasma membrane 46.88 60.0
AT1G02520.1 Thale cress cytosol, peroxisome, plasma membrane 61.14 59.7
HORVU3Hr1G021600.2 Barley peroxisome, plasma membrane, vacuole 54.81 59.43
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 58.17 59.07
TraesCS3A01G117600.3 Wheat peroxisome, plasma membrane 54.89 58.95
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 57.77 58.62
Solyc03g005860.2.1 Tomato plasma membrane 58.81 58.3
PGSC0003DMT400034908 Potato plasma membrane 58.73 58.22
TraesCS6D01G107600.1 Wheat cytosol, plasma membrane, vacuole 42.23 57.98
TraesCS3B01G136800.1 Wheat golgi, mitochondrion, peroxisome, plasma membrane, plastid 58.17 57.89
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 59.38 57.18
AT2G47000.1 Thale cress cytosol, peroxisome, plasma membrane 58.89 57.15
TraesCS3D01G257500.1 Wheat plasma membrane 57.13 56.77
TraesCS3A01G257500.1 Wheat plasma membrane 57.05 56.64
TraesCS3B01G290300.2 Wheat peroxisome 57.21 56.35
KXG33192 Sorghum cytosol 56.97 56.03
Zm00001d043762_P001 Maize cytosol 56.81 55.7
KXG35311 Sorghum plasma membrane 55.53 55.22
TraesCS2B01G012300.1 Wheat plasma membrane 55.61 55.17
HORVU2Hr1G001530.10 Barley plasma membrane 55.29 54.98
HORVU2Hr1G001630.2 Barley plasma membrane 55.29 54.98
TraesCS3D01G258100.1 Wheat plasma membrane 54.97 54.88
TraesCS2A01G009600.1 Wheat plasma membrane 55.05 54.83
TraesCS2A01G009900.1 Wheat plasma membrane 55.21 54.77
TraesCS2D01G010500.1 Wheat plasma membrane 55.05 54.61
TraesCS2B01G012100.3 Wheat plasma membrane 54.73 54.51
TraesCS3D01G362700.1 Wheat cytosol, peroxisome, plasma membrane 55.69 54.34
TraesCS3B01G401600.3 Wheat cytosol, peroxisome, plasma membrane 55.61 54.3
TraesCS3A01G258200.1 Wheat peroxisome 54.33 54.24
TraesCS3D01G257900.1 Wheat peroxisome 54.81 54.2
TraesCS2D01G010400.1 Wheat plasma membrane 54.41 54.19
TraesCS3A01G369700.1 Wheat peroxisome 55.53 54.14
Os01t0534700-00 Rice plasma membrane 47.92 54.07
Zm00001d005528_P001 Maize plasma membrane 52.08 54.03
KXG32655 Sorghum peroxisome 55.85 53.99
HORVU3Hr1G065320.47 Barley plasma membrane 54.97 53.89
TraesCS2B01G012200.1 Wheat golgi 46.55 53.85
TraesCS6B01G145600.1 Wheat peroxisome 54.49 53.8
Zm00001d011644_P002 Maize plasma membrane 55.21 53.62
Os05t0548500-00 Rice plasma membrane 54.09 53.57
HORVU3Hr1G065280.1 Barley plasma membrane 54.17 53.57
HORVU6Hr1G021320.43 Barley peroxisome 54.25 53.52
TraesCS3A01G258400.3 Wheat peroxisome 53.53 53.1
Zm00001d009447_P002 Maize plasma membrane 53.77 53.09
TraesCS1A01G368500.1 Wheat cytosol, peroxisome, plasma membrane 53.77 53.04
TraesCS1D01G374300.1 Wheat cytosol, peroxisome, plasma membrane 53.93 53.03
TraesCS1B01G387400.1 Wheat peroxisome 53.69 52.96
TraesCS3B01G291100.3 Wheat peroxisome 53.53 52.85
Os01t0533900-01 Rice endoplasmic reticulum, vacuole 35.34 52.81
Zm00001d044564_P008 Maize cytosol, peroxisome, plasma membrane 55.93 52.76
EES01319 Sorghum cytosol 53.85 52.75
Zm00001d009448_P001 Maize cytosol, peroxisome, plasma membrane 53.37 52.69
TraesCS3B01G291000.1 Wheat peroxisome 53.04 52.62
TraesCS3D01G258300.1 Wheat cytosol, peroxisome, plasma membrane 53.29 52.57
HORVU1Hr1G078450.24 Barley plasma membrane 53.21 52.49
TraesCS3D01G258200.2 Wheat peroxisome 52.88 52.42
Os01t0695700-00 Rice plasma membrane 53.21 52.41
TraesCS5A01G495900.1 Wheat plasma membrane 53.21 52.41
HORVU3Hr1G065240.14 Barley cytosol 53.61 52.27
TraesCS3A01G258000.1 Wheat mitochondrion 54.81 51.58
Zm00001d043766_P005 Maize cytosol 52.56 51.33
TraesCS3B01G290700.1 Wheat peroxisome 41.75 49.71
Os02t0323000-01 Rice cytosol, peroxisome 16.83 49.65
AT1G10680.1 Thale cress plasma membrane 41.67 42.38
AT3G28860.1 Thale cress plasma membrane 42.15 42.01
AT2G36910.1 Thale cress peroxisome 42.63 41.37
AT4G25960.1 Thale cress plasma membrane 42.15 41.32
AT3G28345.1 Thale cress plasma membrane 40.95 41.21
AT3G28390.1 Thale cress plasma membrane 40.14 40.9
AT3G28360.1 Thale cress plasma membrane 39.58 40.23
AT1G27940.1 Thale cress peroxisome, plasma membrane, vacuole 39.98 40.08
OQU78384 Sorghum plasma membrane 54.49 36.06
AT3G55320.1 Thale cress cytosol, peroxisome, plasma membrane 36.3 32.17
AT2G39480.1 Thale cress cytosol, mitochondrion, plasma membrane 36.22 32.13
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300EntrezGene:834697InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AED95396.1ArrayExpress:AT5G46540EnsemblPlantsGene:AT5G46540
RefSeq:AT5G46540TAIR:AT5G46540RefSeq:AT5G46540-TAIR-GEnsemblPlants:AT5G46540.1TAIR:AT5G46540.1Unigene:At.29949
ProteinID:BAB10822.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640RefSeq:NP_199466.1InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF00664Symbol:PGP7PO:PO:0000084PO:PO:0001185PO:PO:0007611PO:PO:0007616
PO:PO:0009009PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052
PO:PO:0025022ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF398
UniProt:Q9FHF1SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI00000A976B
SEG:seg:::::
Description
ABCB7ABC transporter B family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHF1]
Coordinates
chr5:-:18877090..18882462
Molecular Weight (calculated)
136120.0 Da
IEP (calculated)
7.577
GRAVY (calculated)
0.130
Length
1248 amino acids
Sequence
(BLAST)
0001: MAEKAKKKKN GGGGNQRIAF YKLFTFADRY DIVLMVIGTL SAMANGLTQP FMSILMGQLI NVFGFSDHDH VFKEVSKVAV KFLYLAAYAG VVSFLQVSCW
0101: MVTGERQSTR IRRLYLKTIL RQDIGFFDTE TNTGEVIGRM SGDTILIQDS MGEKVGKFTQ LVSSFVGGFT VAFIVGMKLT LALLPCVPLI VGTGGAMTYI
0201: MSKKAQRVQL AYTEAGNVVQ QAVGSIRTVV AFTGEKQSMG KYEKKLEIAY KSMVKQGLYS GLGIGIMMVV VYCTYGFAIW YGARQIIEKG YTGGQVMNVI
0301: TSILTGGMAL GQTLPSLNSF AAGTAAAYKM FETIKRKPKI DAYDMSGEVL EEIKGDIELR DVYFRYPARP DVQIFVGFSL TVPNGMTVAL VGQSGSGKST
0401: VISLIERFYD PESGEVLIDG IDLKKFQVKW IRSKIGLVSQ EPILFATTIR ENIVYGKKDA SDQEIRTALK LANASNFIDK LPQGLETMVG EHGTQLSGGQ
0501: KQRIAIARAI LKNPKILLLD EATSALDAES ERIVQDALVK LMLSRTTVVV AHRLTTIRTA DMIAVVQQGK VIEKGTHDEM IKDPEGTYSQ LVRLQEGSKK
0601: EEAIDKEPEK CEMSLEIESS DSQNGIHSGT LTSPSGLPGV ISLDQTEEFH ENISSTKTQT VKKGKEVSLR RLAHLNKPEI SVLLLGSLAA VIHGIVFPVQ
0701: GLLLSRTIRI FFEPSNKLKN DSLFWALIFV ALGLTDLIVI PLQNYLFAIA GAKLIKRIRS LSFDRVLHQD ISWFDDTKNS SGVIGARLST DASTVKSIVG
0801: DVLGLIMQNM ATIIGAFIIA FTANWLLALM ALLVAPVMFF QGYYQIKFIT GFGAKARGKY EEASQVASDA VSSIRTVASF CAEDKVMDLY QEKCDEPKQQ
0901: GFKLGLVSGL CYGGSYLALY VIESVCFLGG SWLIQNRRAT FGEFFQVFFA LTLTAVGVTQ TSTMAPDINK AKDSAASIFD ILDSKPKIDS SSEKGTILPI
1001: VHGDIELQHV SFRYPMRPDI QIFSDLCLTI SSGQTVALVG ESGSGKSTVI SLLERFYDPD SGKILLDQVE IQSLKLSWLR EQMGLVSQEP VLFNETIGSN
1101: IAYGKIGGAT EEEIITAAKA ANVHNFISSL PQGYETSVGE RGVQLSGGQK QRIAIARAIL KDPKILLLDE ATSALDAESE RVVQDALDQV MVNRTTVVVA
1201: HLLTTIKDAD MIAVVKNGVI AESGRHETLM EISGGAYASL VAFNMSAN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.