Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G258200.2 | Wheat | peroxisome | 97.69 | 97.62 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 87.2 | 86.79 |
| EES01319 | Sorghum | cytosol | 80.52 | 79.51 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 15.74 | 78.26 |
| Os01t0695700-00 | Rice | plasma membrane | 78.3 | 77.74 |
| Zm00001d043766_P005 | Maize | cytosol | 78.22 | 77.0 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 66.3 | 65.82 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 64.39 | 64.08 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 63.27 | 63.27 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 52.07 | 62.5 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 61.92 | 62.17 |
| TraesCS2B01G012200.1 | Wheat | golgi | 53.02 | 61.82 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 60.89 | 60.55 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 56.44 | 57.68 |
| Bra012621.1-P | Field mustard | plasma membrane | 56.76 | 57.26 |
| KRH11119 | Soybean | plasma membrane | 56.76 | 57.26 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 57.95 | 57.04 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 55.88 | 56.74 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 43.8 | 56.51 |
| KRH21125 | Soybean | plasma membrane | 56.6 | 56.46 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 48.81 | 56.28 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.32 | 56.15 |
| AT4G18050.2 | Thale cress | plasma membrane | 55.17 | 55.7 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 55.48 | 55.66 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 55.33 | 55.02 |
| Solyc02g071350.2.1 | Tomato | plastid | 54.85 | 54.63 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 54.61 | 54.44 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 54.69 | 53.96 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 53.58 | 53.37 |
| AT5G46540.1 | Thale cress | golgi | 52.62 | 53.04 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 52.38 | 52.34 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 52.07 | 52.03 |
| Bra017539.1-P | Field mustard | plasma membrane | 40.22 | 49.08 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 41.57 | 41.61 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 41.1 | 40.9 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 40.94 | 40.78 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 37.68 | 37.47 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 40.22 | 36.99 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 36.88 | 36.88 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 36.01 | 36.12 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 37.36 | 35.77 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 35.37 | 35.21 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 36.65 | 32.72 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 36.65 | 32.7 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF238 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G291000 | EnsemblPlants:TraesCS3B01G291000.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3B:-:466614104..466621363
Molecular Weight (calculated)
137451.0 Da
IEP (calculated)
7.595
GRAVY (calculated)
0.102
Length
1258 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDEAMRDRG EDAEKGERER KTEGARKVPF FSMFRYASRA DMALMAVGTV AAMVNGMGDP LMTVVFAAVI ECFGAGDNVL QRVSKVVMYY IYLGIGTAVA
0101: SFLQVSCWTM TGERQSIRIR SLYLEAVLKQ DVSFFDVEMT TGEAISRMSA DTVLVQDALG EKVGKYAQLL TTFVGCFIIG FVRGWMLALV MLACIPPNIL
0201: SFAIMSRLRA QISARRQASY TDAGNVVEQT IGAIRTVISF NGEKKAIALY NTLTKRAYKA TVLEGIATGL GTGGIFSVFF CGYSLAFWYG AKLIINKGYT
0301: GGQVVNVVFA MLTGSMAIGT ASPSISAIAE GQSAAYRLFE IMNKEPKIDI TDTSGIVLDG IRGDVELNNV FFRYPARPEQ LILNGLSLHV PSGTTMAIVG
0401: ESGSGKSTII SLVERFYDPQ AGDVLIDGIN IKSMKLQWIR GMISLVSQEP LLFMTSIKDN ITYGKEDATL EEIKRAAELA NATNFIEKLP NAYETMVGQN
0501: GAQLSGGQKQ RIAIARAILK NPRVLLLDEA TSALDVESER VVQEALNRIM VGITTLIVAH RLSTVRNADC IAVVHQGKVA ERGVHDDLIK DPDGAYSHLI
0601: RLQQAHTEET PEMPYVASSR FKSTSISLEQ SIRDSPRNRR QHSSKSLGLS RSDDLFRHVA SREEHLEIGD SEAPKKAPIG RLFNLSRPEA PILLLAIIAA
0701: TLHGLLFPSF SIMMSGGIRT FYYPAHQLRK DSTFWALMCL LMAIISLVSI QLEFYLFGVA GGKLIERVRA LSFQSIIHQE VAWFDDPSNS SGALGARLFI
0801: DALNIRRLVG DNLAVLVQCT VTLICGFGIA FASDWKLTLS IIGVIPFLGL QNYIQLRFLK GFGEDAKVMY EDASQVVAEA IGSIRTVASF GAEKRVITLY
0901: SQKCQASMKQ GIRSGMVGGV GFSFSNLMLY LTYALCFYVG AQFVHDGKST FQNVFRVYFA LVFTAFGISQ TSDMASDSTK GRESATSILS FIDRKPKIDS
1001: TSDEGIKLEK VDGTIEFNHV RFKYPSRPDV QIFSDFTLRI ASGKTTALVG ESGSGKSTVI ALLERFYDPD SGTISLDGTE LRKLTLSWLR DQMGLVSQEP
1101: ILFNDTIRAN IAYGKRGEAT EEEIITMAKA ANAHEFISGL PQGYNTNVGE RGTQLSGGQK QRVAIARAIL KDPRILLLDE ATSALDAESE HIVQDTLDQV
1201: MVSRTTIVVA HRLSTIKGAD MIAVIKDGSV AEKGKHESLM GIKGGVYASL VELHSKAA
0101: SFLQVSCWTM TGERQSIRIR SLYLEAVLKQ DVSFFDVEMT TGEAISRMSA DTVLVQDALG EKVGKYAQLL TTFVGCFIIG FVRGWMLALV MLACIPPNIL
0201: SFAIMSRLRA QISARRQASY TDAGNVVEQT IGAIRTVISF NGEKKAIALY NTLTKRAYKA TVLEGIATGL GTGGIFSVFF CGYSLAFWYG AKLIINKGYT
0301: GGQVVNVVFA MLTGSMAIGT ASPSISAIAE GQSAAYRLFE IMNKEPKIDI TDTSGIVLDG IRGDVELNNV FFRYPARPEQ LILNGLSLHV PSGTTMAIVG
0401: ESGSGKSTII SLVERFYDPQ AGDVLIDGIN IKSMKLQWIR GMISLVSQEP LLFMTSIKDN ITYGKEDATL EEIKRAAELA NATNFIEKLP NAYETMVGQN
0501: GAQLSGGQKQ RIAIARAILK NPRVLLLDEA TSALDVESER VVQEALNRIM VGITTLIVAH RLSTVRNADC IAVVHQGKVA ERGVHDDLIK DPDGAYSHLI
0601: RLQQAHTEET PEMPYVASSR FKSTSISLEQ SIRDSPRNRR QHSSKSLGLS RSDDLFRHVA SREEHLEIGD SEAPKKAPIG RLFNLSRPEA PILLLAIIAA
0701: TLHGLLFPSF SIMMSGGIRT FYYPAHQLRK DSTFWALMCL LMAIISLVSI QLEFYLFGVA GGKLIERVRA LSFQSIIHQE VAWFDDPSNS SGALGARLFI
0801: DALNIRRLVG DNLAVLVQCT VTLICGFGIA FASDWKLTLS IIGVIPFLGL QNYIQLRFLK GFGEDAKVMY EDASQVVAEA IGSIRTVASF GAEKRVITLY
0901: SQKCQASMKQ GIRSGMVGGV GFSFSNLMLY LTYALCFYVG AQFVHDGKST FQNVFRVYFA LVFTAFGISQ TSDMASDSTK GRESATSILS FIDRKPKIDS
1001: TSDEGIKLEK VDGTIEFNHV RFKYPSRPDV QIFSDFTLRI ASGKTTALVG ESGSGKSTVI ALLERFYDPD SGTISLDGTE LRKLTLSWLR DQMGLVSQEP
1101: ILFNDTIRAN IAYGKRGEAT EEEIITMAKA ANAHEFISGL PQGYNTNVGE RGTQLSGGQK QRVAIARAIL KDPRILLLDE ATSALDAESE HIVQDTLDQV
1201: MVSRTTIVVA HRLSTIKGAD MIAVIKDGSV AEKGKHESLM GIKGGVYASL VELHSKAA
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.