Factsheet for VIT_10s0003g02540.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 5
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	34.44	77.8
VIT_10s0003g02570.t01	Wine grape	plasma membrane	76.85	76.35
Solyc02g071350.2.1	Tomato	plastid	77.17	75.22
TraesCS6B01G145800.1	Wheat	cytosol	15.43	75.1
PGSC0003DMT400007960	Potato	plasma membrane	76.69	74.8
Os01t0695800-01	Rice	plasma membrane	15.84	74.43
Bra012621.1-P	Field mustard	plasma membrane	75.22	74.26
KRH21125	Soybean	plasma membrane	75.71	73.91
VIT_10s0003g02580.t01	Wine grape	plasma membrane	75.47	73.44
KRH11119	Soybean	plasma membrane	74.25	73.3
AT4G18050.2	Thale cress	plasma membrane	73.68	72.79
CDY35168	Canola	golgi, peroxisome, plasma membrane	62.06	70.03
Solyc02g071340.1.1	Tomato	plasma membrane	70.43	68.65
AT5G46540.1	Thale cress	golgi	68.24	67.31
GSMUA_Achr2P20180_001	Banana	plasma membrane	52.56	66.36
Bra017539.1-P	Field mustard	plasma membrane	55.24	65.96
PGSC0003DMT400034908	Potato	plasma membrane	66.78	65.29
HORVU3Hr1G021600.2	Barley	peroxisome, plasma membrane, vacuole	60.93	65.16
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	61.33	64.97
Solyc03g005860.2.1	Tomato	plasma membrane	66.37	64.89
Os05t0548300-01	Rice	plasma membrane	30.63	64.78
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.59	64.15
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	46.63	63.15
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.04	62.83
TraesCS3A01G257500.1	Wheat	plasma membrane	63.93	62.61
TraesCS3D01G257500.1	Wheat	plasma membrane	63.85	62.58
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	63.61	62.44
TraesCS3B01G290300.2	Wheat	peroxisome	63.93	62.12
Zm00001d043762_P001	Maize	cytosol	63.93	61.82
KXG33192	Sorghum	cytosol	63.69	61.78
HORVU2Hr1G001630.2	Barley	plasma membrane	62.55	61.35
HORVU2Hr1G001530.10	Barley	plasma membrane	62.55	61.35
KXG35311	Sorghum	plasma membrane	62.47	61.27
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	41.43	61.08
TraesCS2A01G009900.1	Wheat	plasma membrane	62.31	60.97
TraesCS2B01G012300.1	Wheat	plasma membrane	62.14	60.81
Os01t0534700-00	Rice	plasma membrane	54.51	60.67
TraesCS2D01G010500.1	Wheat	plasma membrane	61.9	60.57
KXG32655	Sorghum	peroxisome	63.36	60.42
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	62.71	60.36
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	62.63	60.33
TraesCS3A01G369700.1	Wheat	peroxisome	62.71	60.31
Zm00001d005528_P001	Maize	plasma membrane	58.49	59.85
TraesCS2D01G010400.1	Wheat	plasma membrane	60.84	59.78
TraesCS2B01G012100.3	Wheat	plasma membrane	60.76	59.7
TraesCS2A01G009600.1	Wheat	plasma membrane	60.6	59.54
TraesCS3D01G257900.1	Wheat	peroxisome	60.93	59.43
TraesCS3D01G258100.1	Wheat	plasma membrane	60.2	59.28
TraesCS3A01G258200.1	Wheat	peroxisome	60.03	59.12
Zm00001d009447_P002	Maize	plasma membrane	60.36	58.78
HORVU3Hr1G065320.47	Barley	plasma membrane	60.76	58.76
HORVU3Hr1G065280.1	Barley	plasma membrane	60.2	58.72
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	62.96	58.58
Os05t0548500-00	Rice	plasma membrane	59.95	58.57
TraesCS2B01G012200.1	Wheat	golgi	51.26	58.48
HORVU6Hr1G021320.43	Barley	peroxisome	60.03	58.42
Zm00001d011644_P002	Maize	plasma membrane	60.84	58.29
TraesCS6B01G145600.1	Wheat	peroxisome	59.71	58.15
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	59.14	57.59
Os02t0323000-01	Rice	cytosol, peroxisome	19.66	57.21
TraesCS5A01G495900.1	Wheat	plasma membrane	58.73	57.06
TraesCS3B01G291100.3	Wheat	peroxisome	58.49	56.96
TraesCS3D01G258200.2	Wheat	peroxisome	58.25	56.95
TraesCS3A01G258400.3	Wheat	peroxisome	58.0	56.76
Os01t0695700-00	Rice	plasma membrane	58.41	56.75
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	58.25	56.68
EES01319	Sorghum	cytosol	58.57	56.59
TraesCS3B01G291000.1	Wheat	peroxisome	57.68	56.44
HORVU3Hr1G065240.14	Barley	cytosol	58.65	56.41
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	57.92	56.36
TraesCS1B01G387400.1	Wheat	peroxisome	57.92	56.36
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	58.0	56.26
TraesCS3A01G258000.1	Wheat	mitochondrion	60.6	56.26
HORVU1Hr1G078450.24	Barley	plasma membrane	57.43	55.89
Zm00001d043766_P005	Maize	cytosol	57.51	55.4
TraesCS3B01G290700.1	Wheat	peroxisome	47.12	55.34
VIT_14s0066g02320.t01	Wine grape	peroxisome	41.92	44.6
VIT_02s0012g01660.t01	Wine grape	plasma membrane	44.35	43.93
VIT_14s0108g00430.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.19	43.52
VIT_18s0001g14660.t01	Wine grape	peroxisome, plasma membrane, vacuole	42.4	42.79
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	40.94	41.14
VIT_11s0016g03160.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	40.54	40.73
VIT_01s0137g00350.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	40.62	39.94
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.46	39.51
OQU78384	Sorghum	plasma membrane	60.44	39.45
VIT_17s0000g09760.t01	Wine grape	plasma membrane	37.12	38.18
VIT_16s0098g00570.t01	Wine grape	cytosol, plasma membrane, vacuole	35.99	37.29
VIT_13s0019g00310.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	37.12	35.15
VIT_06s0004g04100.t01	Wine grape	cytosol	37.69	33.02
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	41.59	32.47

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100253815	wikigene:100253815	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM472754	ProteinID:CAN77320
ProteinID:CAN77320.1	ProteinID:CCB55749	ProteinID:CCB55749.1	UniProt:F6HMG0	EMBL:FN595992	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	EntrezGene:LOC100253815
wikigene:LOC100253815	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF398	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	UniParc:UPI0002108B0E	ArrayExpress:VIT_10s0003g02540	EnsemblPlantsGene:VIT_10s0003g02540	EnsemblPlants:VIT_10s0003g02540.t01	RefSeq:XP_002271185
RefSeq:XP_002271185.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:4494287..4500619

Molecular Weight (calculated)

133184.0 Da

IEP (calculated)

7.321

GRAVY (calculated)

0.139

Length

1231 amino acids

Sequence
(BLAST)

0001: MIVGTVCAMA NGMTQPLMTL IFGQLINTFG DSDPSHVVHE VSRVSLKFVY LAIGSGIASL LQVSSWMVTG ERQATRIRGL YLKTILRQDI AFFDTETTTG
0101: EVIGRMSGDT ILIQDAMGEK VGKFIQLMST FLGGFIIAFA RGWLLSLVLL PSIPLLVISG GTMAIIMSRM SSRGQLAYAE AGNVVEQTVG AIRTVASFTG
0201: EKKAIKNYDN KLHIAYASTV QQGLASGIGL GTVLLIIFGT YGLAMWYGSK LVIERGYDGG RVINCIMAIM SGGMSLGQTS PCLNAFAAGQ AAAYKMFETI
0301: KRKPQIDAYD TSGTVLEDIR GEIELKDVYF NYPARPDVQI FSGISLHVPS GKTAALVGQS GSGKSTVISL LERFYDPHSG EVLIDGVDLK QLQLKWIREK
0401: IGLVSQEPIL FATTIKENIS YGKEDASDEE IRTAIVLANA AKFIDKLPKG LDTMVGEHGT QLSGGQKQRI AIARAILKNP RILLLDEATS ALDAESERIV
0501: QDALVNVMVN RTTVVVAHRL TTIRNADIIA VVYQGKIVEQ GTHGELIKDP DGAYTQLVHL QEGNSQAKDA HMEDTDKLDK SPDNMDNSIA RSGSQRLSLW
0601: RSMSRGSSSG RSSVSLSFSV PFPIGIPATE MAGQDIERRD GEDEKRRKVS LRRLAYLNKP EVPVLLLGSI AAGIHGVIFP IFGLLLSTAI KIFFEPPNEL
0701: KKDSRFWALM FVGLGVLTLM VVPVQNYFFG VAGGKLIQRI RSLSFEKVVH QEISWFDDPA NSSGAVGARL STDASSVRSL VGDALALVVQ NLTTVIAGLV
0801: ISFTANWILA LIILAVLPLV FLQGYFQMKF VKGFSADAKV MYEEASQVAN DAVGSIRTVA SFCAEKKVMD MYQQKCDAPM KQGVRLGLVS GAGFGFSFFA
0901: LYCTNAFCFY IGAILVQHGK ATFGEVFKVF FALTISAIGI SQTSAMAPDT NKAKDSTATI FQLLDSKPTI DSSSNEGTTL ANVKGDIEFQ HVSFKYSTRP
1001: DVQIFRDLSL SIPSGKTVAL VGESGSGKST VISLIERFYN PESGRILLDG MEIQKLKLSW LRQQMGLVGQ EPVLFNETIR ANIAYGKEGA TEDEIIAATK
1101: AANAHNFIHS LPQGYETSVG ERGVQLSGGQ KQRIAIARAI LKDPKILLLD EATSALDAES ERVVQEALDR VMVERTTVVV AHRLTTIKGA DIIAVVKNGV
1201: IAEKGSHEEL MSITDGPYAS LVALHTTSSS T

Best Arabidopsis Sequence Match ( AT4G18050.2 )
(BLAST)

0001: MKKEEERKER MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV
0101: AFLQVSCWMV TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI
0201: AGAAMSLIMS KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN
0301: GGQVINVIFA VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG
0401: QSGSGKSTVI SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH
0501: GTQMSGGQKQ RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV
0601: RLQEGSKEEA TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS
0701: IAAMVHGTVF PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA
0801: LALIVQNIAT VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV
0901: RLGLLSGAGF GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN
1001: GDIEFRHVSF RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA
1101: YGKTGGATEE EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR
1201: LTTIKNADVI AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN

Arabidopsis Description

PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.