Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH53669 | Soybean | plasma membrane | 72.22 | 68.42 |
PGSC0003DMT400069516 | Potato | peroxisome | 67.85 | 67.96 |
Solyc06g072960.1.1 | Tomato | peroxisome | 58.25 | 67.32 |
OQU79902 | Sorghum | nucleus, peroxisome, plasma membrane | 64.06 | 60.4 |
Zm00001d024600_P002 | Maize | peroxisome | 64.06 | 60.25 |
TraesCS7B01G203400.1 | Wheat | peroxisome | 63.38 | 59.86 |
TraesCS7D01G298600.1 | Wheat | peroxisome | 63.38 | 59.86 |
HORVU7Hr1G071870.33 | Barley | peroxisome | 63.64 | 59.62 |
TraesCS7A01G303200.1 | Wheat | cytosol | 39.14 | 59.46 |
HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 50.76 | 55.27 |
TraesCS7B01G203300.1 | Wheat | peroxisome | 58.08 | 54.59 |
TraesCS7D01G298400.1 | Wheat | peroxisome | 58.08 | 54.59 |
TraesCS6B01G170700.1 | Wheat | plasma membrane | 57.58 | 54.55 |
TraesCS6D01G131900.1 | Wheat | plasma membrane | 57.58 | 54.5 |
TraesCS7A01G303100.1 | Wheat | peroxisome | 57.74 | 54.27 |
Zm00001d049565_P001 | Maize | peroxisome | 57.15 | 53.72 |
OQU79903 | Sorghum | peroxisome | 57.07 | 53.51 |
VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 18.43 | 40.18 |
VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 41.25 | 39.2 |
VIT_14s0066g02320.t01 | Wine grape | peroxisome | 37.29 | 38.29 |
VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 39.65 | 37.89 |
VIT_18s0001g14660.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 38.89 | 37.87 |
VIT_19s0085g00060.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 38.38 | 37.22 |
VIT_11s0016g03160.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 37.63 | 36.49 |
VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 37.88 | 36.32 |
VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 37.29 | 35.99 |
VIT_08s0007g05060.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 40.57 | 35.6 |
VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 37.71 | 35.41 |
VIT_17s0000g09760.t01 | Wine grape | plasma membrane | 35.61 | 35.34 |
VIT_01s0137g00350.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 37.12 | 35.22 |
VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 37.96 | 34.77 |
VIT_05s0020g00890.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 37.29 | 34.23 |
VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 34.76 | 31.77 |
VIT_06s0004g04100.t01 | Wine grape | cytosol | 36.11 | 30.53 |
VIT_09s0002g00750.t01 | Wine grape | peroxisome, plastid | 36.87 | 27.77 |
Protein Annotations
Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:CCB48118 | ProteinID:CCB48118.1 | ncoils:Coil | UniProt:F6H7B1 |
EMBL:FN595247 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF305 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
TMHMM:TMhelix | UniParc:UPI0002107EB9 | ArrayExpress:VIT_16s0098g00570 | EnsemblPlantsGene:VIT_16s0098g00570 | EnsemblPlants:VIT_16s0098g00570.t01 | SEG:seg |
Description
No Description!
Coordinates
chr16:+:21004457..21010493
Molecular Weight (calculated)
130161.0 Da
IEP (calculated)
6.554
GRAVY (calculated)
0.067
Length
1188 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDVKKKKKTE GDGDTAMGEE ALPFHKLLSY ADGLDWVLMA LGTLGSIVHG LAQPVGYLLL GKALDAYGTN IKDPEAMVDA LYKVVPYVWY MAAAMFPAGI
0101: LEVGCWMHAS ERQVSRLRLA FLRAALNQEI GAFDTDLTSG KIISGISSHM SIIQDAIGEK LGHFLSNIAT CFSGILIAAI CCWEVSLLTL LVVPLVLVTG
0201: ATYSKKMNAI SAAKMHFLSE ATSMIEQTLS QIKTVFAFVG ESTAAKSFSE CMDKQFRISK REAIIKGVGT GLFQTVTTCC WALIIWVGAI VVTAKRSSGG
0301: DIIAAVMSIL FGAISLTYAA PDIQIFNSAK AAGNEVFQVI KRKPAISYDS EGKTLEKING NIDMQDVYFT YPSRKERLIL DGFSFSIPAG KVVALVGSSG
0401: CGKSTVISLV ARFYDPSQGE ILIDNYNIKD LDLKFLRKNI GAVFQEPSLF SGTIKDNIKV GSMEADDQEV QNVALMANAH SFITQLPDQY STEVGERGVQ
0501: LSGGQKQRIA IARAIIKNPP ILLLDEATSA LDSESEKLVQ AAIEKAMQGR TVILIAHRMS TVINADMIAV IENGQVKETG THSDLLDTSN FYNNLFNMQN
0601: LCPDQGSRVT DLTEENASTD QEISFQDLDQ SEEPNKHPRD ALKEEEQRED AKQRVGLYSI LFSLIGLLSL FTHTLQHYFF GVIGEKAMTN LRQALYSGIL
0701: NNELAWFEKP ENNVGSLTSR IINDTSTVKT IISDRMSVIV QCISSILIAT IVTMKLNWRM GLVAWAVMPC HFIGGLIQAK FAKGFSSGSA AAHCELVALA
0801: SESATNMKTI ASFCHEDFIL DKAKIALEPP MRKSRRASIK YGIIQGFSLC LWNIAHAVAL WYTAVLVERD QATFENGIRS YQIFSLTVPS ITELWTLIPT
0901: VISAISILTP TFKTLDRKTE IEPDTPENSH AEKIKGRIEF QNVSFNYPLR PEVTVLNNFC LQIEAGSKVA LVGPSGAGKS SVLALILRFY DPRAGRILID
1001: RKDIRNYNLR RLRSRIGLVQ QEPLLFSSSI RDNICYGNDG ASETEIIEVA REARIHEFIS NLSHGYDTVV GQKGCQLSGG QKQRIAIART LLKRPAILLL
1101: DEATSALDTQ SERAVVSALE STKLNNNGDL SRTTQITVAH RLSTVINSDT IIVMDKGEIV EMGPHSTLIA VSDGLYSKLV QLQSLGEN
0101: LEVGCWMHAS ERQVSRLRLA FLRAALNQEI GAFDTDLTSG KIISGISSHM SIIQDAIGEK LGHFLSNIAT CFSGILIAAI CCWEVSLLTL LVVPLVLVTG
0201: ATYSKKMNAI SAAKMHFLSE ATSMIEQTLS QIKTVFAFVG ESTAAKSFSE CMDKQFRISK REAIIKGVGT GLFQTVTTCC WALIIWVGAI VVTAKRSSGG
0301: DIIAAVMSIL FGAISLTYAA PDIQIFNSAK AAGNEVFQVI KRKPAISYDS EGKTLEKING NIDMQDVYFT YPSRKERLIL DGFSFSIPAG KVVALVGSSG
0401: CGKSTVISLV ARFYDPSQGE ILIDNYNIKD LDLKFLRKNI GAVFQEPSLF SGTIKDNIKV GSMEADDQEV QNVALMANAH SFITQLPDQY STEVGERGVQ
0501: LSGGQKQRIA IARAIIKNPP ILLLDEATSA LDSESEKLVQ AAIEKAMQGR TVILIAHRMS TVINADMIAV IENGQVKETG THSDLLDTSN FYNNLFNMQN
0601: LCPDQGSRVT DLTEENASTD QEISFQDLDQ SEEPNKHPRD ALKEEEQRED AKQRVGLYSI LFSLIGLLSL FTHTLQHYFF GVIGEKAMTN LRQALYSGIL
0701: NNELAWFEKP ENNVGSLTSR IINDTSTVKT IISDRMSVIV QCISSILIAT IVTMKLNWRM GLVAWAVMPC HFIGGLIQAK FAKGFSSGSA AAHCELVALA
0801: SESATNMKTI ASFCHEDFIL DKAKIALEPP MRKSRRASIK YGIIQGFSLC LWNIAHAVAL WYTAVLVERD QATFENGIRS YQIFSLTVPS ITELWTLIPT
0901: VISAISILTP TFKTLDRKTE IEPDTPENSH AEKIKGRIEF QNVSFNYPLR PEVTVLNNFC LQIEAGSKVA LVGPSGAGKS SVLALILRFY DPRAGRILID
1001: RKDIRNYNLR RLRSRIGLVQ QEPLLFSSSI RDNICYGNDG ASETEIIEVA REARIHEFIS NLSHGYDTVV GQKGCQLSGG QKQRIAIART LLKRPAILLL
1101: DEATSALDTQ SERAVVSALE STKLNNNGDL SRTTQITVAH RLSTVINSDT IIVMDKGEIV EMGPHSTLIA VSDGLYSKLV QLQSLGEN
0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
Arabidopsis Description
ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.