Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 97.13 | 97.05 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 83.65 | 96.15 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 80.94 | 80.3 |
| OQU79903 | Sorghum | peroxisome | 77.35 | 76.56 |
| Zm00001d049565_P001 | Maize | peroxisome | 76.16 | 75.55 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 67.3 | 67.09 |
| KRH53669 | Soybean | plasma membrane | 58.05 | 58.05 |
| VIT_16s0098g00570.t01 | Wine grape | cytosol, plasma membrane, vacuole | 54.55 | 57.58 |
| Solyc06g072960.1.1 | Tomato | peroxisome | 46.81 | 57.1 |
| PGSC0003DMT400069516 | Potato | peroxisome | 53.11 | 56.16 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 10.69 | 52.96 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 38.76 | 38.66 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 38.52 | 38.21 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 38.12 | 37.85 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 37.64 | 37.52 |
| TraesCS2B01G012200.1 | Wheat | golgi | 32.06 | 37.26 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 37.4 | 37.02 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 36.6 | 36.6 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.08 | 36.47 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 36.2 | 36.23 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 36.12 | 36.01 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 36.28 | 35.97 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 36.52 | 35.84 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 39.08 | 35.82 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 36.04 | 35.76 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 35.49 | 35.21 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 33.49 | 33.2 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 34.53 | 32.95 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 26.16 | 31.3 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 34.05 | 30.28 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 33.49 | 29.81 |
Protein Annotations
| MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF218 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G170700 | EnsemblPlants:TraesCS6B01G170700.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr6B:+:183282492..183289366
Molecular Weight (calculated)
136510.0 Da
IEP (calculated)
6.733
GRAVY (calculated)
0.160
Length
1254 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEKDCPVES FKPEDDKKST PPEIAVADEP FPFFGLLCYA DALDWLLMVS GTIGSFVHGM APAMSYYILG KAVDMFGDNI GNREAIVHQL TKLLPYMWSL
0101: AIITLPAGMI EITCWMYTSQ RQMTRMQMAY LGSVLSQDVG AFDTDLTTAN IMAGTTNHMS VIKDAIGEKM GHFISNFSTF LVAVIVAFVC CWEVGMLSLL
0201: VVPMLLVVGA TYAKTMIGMS MTRTAFVSET TTVVEQTLSH IKTVFSFVGE NSAMKSFVKC MDKQYKLSKK EAFIKGLGLG MLQIVTFCSY SLTIYVGAVA
0301: VTRRSAKAGE TIAAVINILS GAIYLSNAAP DLQIFSQAKA AGKEVFKVIK RNPVISSESN GRILEKVIGD IEIREVHFTY PSREDNPILQ GFSLTVPAGK
0401: IVALVGSSGC GKSTVISLVQ RFYDAMSGDI LIDGQNIKEL DLKSLRRNIG SVSQEPSLFS GTISDNLRIG KMGATDEEVT EAAKTANVHT FISKLPNQYS
0501: TEVGERGVQL SGGQKQRIAI ARAILKNPPI LLLDEATSAL DSESEKLVQD ALDRAMQGRT VILIAHRIST IINADKIVVV ENGRVAHSGT HKELLEKSAF
0601: YSSVCNMQNL EKESDKIGER ITEQDEEEQD NKPSFAADDE EKRIELTSKQ PKQGIRKRTS AFYRIFLGTF KLVPGKVLLG STAAAISGIS RPIFAFFIIT
0701: VAMAYLETDA ERIVGKYSVI LFLVGFLTFF SNIFQHYVYG LVGERAMNNL REALFSVVLR SEVGWFEEPG NSVGFLTSRV VSDTSMIKTI ISDRMSVIVQ
0801: CISSILIATV LSTAVNWRMA LAVYAMMPCH LIAGLVQVRS AKGFATDISS SHQKLISLTS EAVSNIRTVA SFVQEEEILR KADLALQEPM RTIRMESIKY
0901: GALQGVALCL WHMTHAIQLS CTIALLGKGL ATFENCVRSY QTFALTVPSI TELWTLIPMV MSALAVLDPA LDILDRETTI VPDVPKASHD EEDRIVGGIA
1001: FEGVSFSYPS RAKVTILDGF SLAIKPGQRV ALVGPSGAGK STVFALLLRF YEPSQGRVLV DSKDIRDYNL KWLRRQIGLV QQEPILFNLS IRENISYGNE
1101: GASEAEIVQA ATEANIHEFI SGLSAGYGTV VGDKGSQLSG GQKQRIAIAR TILKKPAILL LDEATSALDG ESERVVMSSL AAKGWGKSGI GEVSSSTTTS
1201: ITIAHRLSTV AGADAIVVME KGAVVEMGSH ETLVSASNGV YSRMYRVQVK GAKD
0101: AIITLPAGMI EITCWMYTSQ RQMTRMQMAY LGSVLSQDVG AFDTDLTTAN IMAGTTNHMS VIKDAIGEKM GHFISNFSTF LVAVIVAFVC CWEVGMLSLL
0201: VVPMLLVVGA TYAKTMIGMS MTRTAFVSET TTVVEQTLSH IKTVFSFVGE NSAMKSFVKC MDKQYKLSKK EAFIKGLGLG MLQIVTFCSY SLTIYVGAVA
0301: VTRRSAKAGE TIAAVINILS GAIYLSNAAP DLQIFSQAKA AGKEVFKVIK RNPVISSESN GRILEKVIGD IEIREVHFTY PSREDNPILQ GFSLTVPAGK
0401: IVALVGSSGC GKSTVISLVQ RFYDAMSGDI LIDGQNIKEL DLKSLRRNIG SVSQEPSLFS GTISDNLRIG KMGATDEEVT EAAKTANVHT FISKLPNQYS
0501: TEVGERGVQL SGGQKQRIAI ARAILKNPPI LLLDEATSAL DSESEKLVQD ALDRAMQGRT VILIAHRIST IINADKIVVV ENGRVAHSGT HKELLEKSAF
0601: YSSVCNMQNL EKESDKIGER ITEQDEEEQD NKPSFAADDE EKRIELTSKQ PKQGIRKRTS AFYRIFLGTF KLVPGKVLLG STAAAISGIS RPIFAFFIIT
0701: VAMAYLETDA ERIVGKYSVI LFLVGFLTFF SNIFQHYVYG LVGERAMNNL REALFSVVLR SEVGWFEEPG NSVGFLTSRV VSDTSMIKTI ISDRMSVIVQ
0801: CISSILIATV LSTAVNWRMA LAVYAMMPCH LIAGLVQVRS AKGFATDISS SHQKLISLTS EAVSNIRTVA SFVQEEEILR KADLALQEPM RTIRMESIKY
0901: GALQGVALCL WHMTHAIQLS CTIALLGKGL ATFENCVRSY QTFALTVPSI TELWTLIPMV MSALAVLDPA LDILDRETTI VPDVPKASHD EEDRIVGGIA
1001: FEGVSFSYPS RAKVTILDGF SLAIKPGQRV ALVGPSGAGK STVFALLLRF YEPSQGRVLV DSKDIRDYNL KWLRRQIGLV QQEPILFNLS IRENISYGNE
1101: GASEAEIVQA ATEANIHEFI SGLSAGYGTV VGDKGSQLSG GQKQRIAIAR TILKKPAILL LDEATSALDG ESERVVMSSL AAKGWGKSGI GEVSSSTTTS
1201: ITIAHRLSTV AGADAIVVME KGAVVEMGSH ETLVSASNGV YSRMYRVQVK GAKD
0001: MDNTERSSNG NIQAETEAKE EKKNIKKESV SLMGLFSAAD KLDYFLMLLG GLGACIHGAT LPLFFVFFGK MLDSLGNLST DPKAISSRVS QNALYLVYLG
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
Arabidopsis Description
ABCB13PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.