Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G145800.1 | Wheat | cytosol | 17.15 | 73.12 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 81.74 | 70.11 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 79.24 | 68.24 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 79.8 | 67.96 |
| KXG33192 | Sorghum | cytosol | 76.64 | 65.17 |
| Zm00001d043762_P001 | Maize | cytosol | 76.55 | 64.89 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 66.54 | 56.8 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 53.57 | 55.15 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 64.5 | 55.06 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 63.48 | 54.15 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 61.82 | 53.02 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 58.48 | 51.26 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 60.52 | 51.1 |
| Bra012621.1-P | Field mustard | plasma membrane | 58.2 | 50.36 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 57.28 | 49.28 |
| KRH21125 | Soybean | plasma membrane | 57.55 | 49.25 |
| AT4G18050.2 | Thale cress | plasma membrane | 56.81 | 49.2 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 44.3 | 49.03 |
| Solyc02g071350.2.1 | Tomato | plastid | 57.28 | 48.93 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 57.18 | 48.89 |
| KRH11119 | Soybean | plasma membrane | 56.35 | 48.76 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 57.09 | 48.7 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 55.79 | 48.59 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 48.29 | 47.75 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 55.33 | 47.27 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 54.4 | 46.62 |
| AT5G46540.1 | Thale cress | golgi | 53.85 | 46.55 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 54.68 | 46.27 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 53.94 | 46.23 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 23.08 | 45.69 |
| Bra017539.1-P | Field mustard | plasma membrane | 40.87 | 42.77 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 41.8 | 35.88 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 41.8 | 35.68 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 40.78 | 34.84 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 38.37 | 32.73 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 40.78 | 32.16 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 37.26 | 32.06 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 37.26 | 31.8 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 36.98 | 31.72 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 38.09 | 31.28 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 37.81 | 28.94 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 37.35 | 28.6 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G012200 | EnsemblPlants:TraesCS2B01G012200.1 | TIGR:cd03249 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:6199281..6204169
Molecular Weight (calculated)
117537.0 Da
IEP (calculated)
7.931
GRAVY (calculated)
0.125
Length
1079 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKGWLLCVVM LACIPPVVLA AGIATKMMTK ITSRSQASYS NAGNVVEQTI GAIKTVVSFN GEKQAIEAYN KLIHRSYENV VEEGLTNGFG MGSVFFALFS
0101: SYGLAIWYGG KLVLTKGYTG GQVLTVLLAI MTGAASLGNA APCMTAFAEG QSAAHRMFRI IKRKPDIDPD DNIGKQLEEM RGDVELKDVY FSYPSRPGKL
0201: TFDGFSLHVR TGTMMAIVGE SGSGKSTMVS LVERFYDPQA GEILIDGINI KSLHLDSVRA KIGLVSQEPL LFMTSIKDNI TYGKEDATMD EIKRAAELAN
0301: AANFVGKLPN GYNTMVGQRG AQLSGGQKQR IAIARAIIKN PKILLLDEAT SALDVEAERI VQVALDRIMV DRSTLVVAHR LSTIRNANCI SVIQEGKIVE
0401: QGTHDELVLN LDGAYSQLIL LQESHEEKRI DRRLSTQRSK SASLSMKRSI SDSLGSSSGH SFTLPSRLPG TVESSVGNDT HKENQKECNF DGLVPNQSPM
0501: VRLALLNKPE VPILLLGSLA AAVHGVLFPM FGLMLSSAIK AFYEPLDKLK KDTSFWGLIC VVIGIISIIS IPEEFFLFGI AGGKLIERIR ALSFQSIVHQ
0601: EVAWFDDPRN SSGALGARLS IDALNVRRLV GDNLSLIVQI ISTLVTGVFI AMIADWKLSL ILICVIPLVG LQSYAHVKFL GGFSQDAKMM HEDASQVATD
0701: AVISIRTIAS FCSRKRITRI YDYKCEESMN QGFKTGVVGG IGFGFSYLML YLTYGLCFYV GGQFVRQGKS KFGDIFEVFF ALVLATMGVS QTSAMVSDSN
0801: KAKISAISVF ALLDRKSKID SSNNEGFTLD EVKGDIDFRH VSFKYPTRPD IIIFNDFTLH IPVGKTIALV GESGSGKLTV IALLERFYDP DLGTTLLDGV
0901: GINNLNIKWL RDQIGLVSQE HVLFNDTIRA NIAYGNKREV KEEELISAAK ASNAHEFISS LPRGYDTSVG ERGIQLSGGQ KQRVAIARAI PKDPKILLLD
1001: EATSALDVES ERIVHIALNH VMVGRTTIVV AHRLSTIKCV DTIEVLQDGV IVEKGSHASL MKLKDGVYAS LVELQSASS
0101: SYGLAIWYGG KLVLTKGYTG GQVLTVLLAI MTGAASLGNA APCMTAFAEG QSAAHRMFRI IKRKPDIDPD DNIGKQLEEM RGDVELKDVY FSYPSRPGKL
0201: TFDGFSLHVR TGTMMAIVGE SGSGKSTMVS LVERFYDPQA GEILIDGINI KSLHLDSVRA KIGLVSQEPL LFMTSIKDNI TYGKEDATMD EIKRAAELAN
0301: AANFVGKLPN GYNTMVGQRG AQLSGGQKQR IAIARAIIKN PKILLLDEAT SALDVEAERI VQVALDRIMV DRSTLVVAHR LSTIRNANCI SVIQEGKIVE
0401: QGTHDELVLN LDGAYSQLIL LQESHEEKRI DRRLSTQRSK SASLSMKRSI SDSLGSSSGH SFTLPSRLPG TVESSVGNDT HKENQKECNF DGLVPNQSPM
0501: VRLALLNKPE VPILLLGSLA AAVHGVLFPM FGLMLSSAIK AFYEPLDKLK KDTSFWGLIC VVIGIISIIS IPEEFFLFGI AGGKLIERIR ALSFQSIVHQ
0601: EVAWFDDPRN SSGALGARLS IDALNVRRLV GDNLSLIVQI ISTLVTGVFI AMIADWKLSL ILICVIPLVG LQSYAHVKFL GGFSQDAKMM HEDASQVATD
0701: AVISIRTIAS FCSRKRITRI YDYKCEESMN QGFKTGVVGG IGFGFSYLML YLTYGLCFYV GGQFVRQGKS KFGDIFEVFF ALVLATMGVS QTSAMVSDSN
0801: KAKISAISVF ALLDRKSKID SSNNEGFTLD EVKGDIDFRH VSFKYPTRPD IIIFNDFTLH IPVGKTIALV GESGSGKLTV IALLERFYDP DLGTTLLDGV
0901: GINNLNIKWL RDQIGLVSQE HVLFNDTIRA NIAYGNKREV KEEELISAAK ASNAHEFISS LPRGYDTSVG ERGIQLSGGQ KQRVAIARAI PKDPKILLLD
1001: EATSALDVES ERIVHIALNH VMVGRTTIVV AHRLSTIKCV DTIEVLQDGV IVEKGSHASL MKLKDGVYAS LVELQSASS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.