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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012621.1-P Field mustard plasma membrane 89.89 89.82
Os01t0695800-01 Rice plasma membrane 15.65 74.43
TraesCS6B01G145800.1 Wheat cytosol 15.09 74.31
VIT_10s0003g02540.t01 Wine grape plasma membrane 72.79 73.68
AT5G46540.1 Thale cress golgi 73.44 73.32
PGSC0003DMT400007960 Potato plasma membrane 72.15 71.24
Solyc02g071350.2.1 Tomato plastid 72.07 71.1
VIT_10s0003g02570.t01 Wine grape plasma membrane 69.58 69.98
KRH21125 Soybean plasma membrane 70.47 69.63
KRH11119 Soybean plasma membrane 69.5 69.45
VIT_10s0003g02550.t01 Wine grape cytosol, nucleus, peroxisome 30.26 69.17
VIT_10s0003g02580.t01 Wine grape plasma membrane 67.42 66.4
Solyc02g071340.1.1 Tomato plasma membrane 66.85 65.95
GSMUA_Achr2P20180_001 Banana plasma membrane 50.24 64.21
AT1G02520.1 Thale cress cytosol, peroxisome, plasma membrane 65.33 63.69
AT2G47000.1 Thale cress cytosol, peroxisome, plasma membrane 64.53 62.52
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 64.69 62.19
HORVU3Hr1G021600.2 Barley peroxisome, plasma membrane, vacuole 57.38 62.12
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 60.91 61.76
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 60.91 61.71
TraesCS3A01G117600.3 Wheat peroxisome, plasma membrane 57.54 61.7
Os05t0548300-01 Rice plasma membrane 28.81 61.68
PGSC0003DMT400034908 Potato plasma membrane 62.2 61.56
Solyc03g005860.2.1 Tomato plasma membrane 61.56 60.92
TraesCS6D01G107600.1 Wheat cytosol, plasma membrane, vacuole 44.14 60.51
KXG33192 Sorghum cytosol 61.4 60.28
TraesCS3A01G257500.1 Wheat plasma membrane 60.59 60.06
TraesCS3D01G257500.1 Wheat plasma membrane 60.51 60.03
TraesCS3B01G136800.1 Wheat golgi, mitochondrion, peroxisome, plasma membrane, plastid 60.35 59.97
Zm00001d043762_P001 Maize cytosol 61.08 59.78
TraesCS3B01G290300.2 Wheat peroxisome 60.59 59.59
HORVU2Hr1G001630.2 Barley plasma membrane 59.15 58.73
HORVU2Hr1G001530.10 Barley plasma membrane 59.15 58.73
TraesCS2B01G012300.1 Wheat plasma membrane 59.15 58.59
TraesCS2A01G009900.1 Wheat plasma membrane 58.83 58.27
KXG35311 Sorghum plasma membrane 58.51 58.09
TraesCS2D01G010500.1 Wheat plasma membrane 58.59 58.03
Zm00001d005528_P001 Maize plasma membrane 55.78 57.77
TraesCS3D01G258100.1 Wheat plasma membrane 57.62 57.44
TraesCS3D01G257900.1 Wheat peroxisome 58.11 57.37
Zm00001d011644_P002 Maize plasma membrane 59.07 57.28
Os05t0548500-00 Rice plasma membrane 57.87 57.22
TraesCS3A01G258200.1 Wheat peroxisome 57.38 57.2
Zm00001d009447_P002 Maize plasma membrane 58.03 57.2
TraesCS2A01G009600.1 Wheat plasma membrane 57.46 57.14
HORVU3Hr1G065320.47 Barley plasma membrane 58.35 57.11
KXG32655 Sorghum peroxisome 59.15 57.09
TraesCS2B01G012100.3 Wheat plasma membrane 57.22 56.9
TraesCS2B01G012200.1 Wheat golgi 49.2 56.81
TraesCS2D01G010400.1 Wheat plasma membrane 57.06 56.74
HORVU3Hr1G065280.1 Barley plasma membrane 57.46 56.74
Os01t0534700-00 Rice plasma membrane 50.32 56.69
Os01t0533900-01 Rice endoplasmic reticulum, vacuole 37.8 56.41
TraesCS6B01G145600.1 Wheat peroxisome 56.9 56.09
TraesCS1A01G368500.1 Wheat cytosol, peroxisome, plasma membrane 56.9 56.05
TraesCS1B01G387400.1 Wheat peroxisome 56.9 56.05
TraesCS3B01G401600.3 Wheat cytosol, peroxisome, plasma membrane 57.46 56.02
TraesCS3D01G362700.1 Wheat cytosol, peroxisome, plasma membrane 57.38 55.9
HORVU6Hr1G021320.43 Barley peroxisome 56.74 55.89
TraesCS3A01G258400.3 Wheat peroxisome 56.42 55.88
Os01t0695700-00 Rice plasma membrane 56.82 55.88
Zm00001d044564_P008 Maize cytosol, peroxisome, plasma membrane 59.23 55.78
TraesCS3A01G369700.1 Wheat peroxisome 57.3 55.78
HORVU1Hr1G078450.24 Barley plasma membrane 56.5 55.65
TraesCS1D01G374300.1 Wheat cytosol, peroxisome, plasma membrane 56.66 55.63
TraesCS3B01G291100.3 Wheat peroxisome 56.34 55.54
Zm00001d009448_P001 Maize cytosol, peroxisome, plasma membrane 56.26 55.46
TraesCS3D01G258300.1 Wheat cytosol, peroxisome, plasma membrane 56.26 55.41
TraesCS3D01G258200.2 Wheat peroxisome 55.78 55.2
TraesCS3B01G291000.1 Wheat peroxisome 55.7 55.17
HORVU3Hr1G065240.14 Barley cytosol 56.42 54.92
EES01319 Sorghum cytosol 55.94 54.71
TraesCS3A01G258000.1 Wheat mitochondrion 58.19 54.68
TraesCS5A01G495900.1 Wheat plasma membrane 55.38 54.46
Zm00001d043766_P005 Maize cytosol 55.14 53.76
TraesCS3B01G290700.1 Wheat peroxisome 45.1 53.63
Os02t0323000-01 Rice cytosol, peroxisome 17.26 50.83
AT3G28860.1 Thale cress plasma membrane 44.7 44.49
AT4G25960.1 Thale cress plasma membrane 44.46 43.52
AT1G10680.1 Thale cress plasma membrane 42.7 43.36
AT3G28345.1 Thale cress plasma membrane 42.62 42.82
AT2G36910.1 Thale cress peroxisome 43.74 42.38
AT3G28390.1 Thale cress plasma membrane 41.57 42.29
AT1G27940.1 Thale cress peroxisome, plasma membrane, vacuole 41.73 41.77
AT3G28360.1 Thale cress plasma membrane 40.45 41.04
OQU78384 Sorghum plasma membrane 57.95 38.28
AT3G55320.1 Thale cress cytosol, peroxisome, plasma membrane 38.44 34.02
AT2G39480.1 Thale cress cytosol, mitochondrion, plasma membrane 37.32 33.05
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300EntrezGene:827530UniProt:A0A1P8B3X8InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:ANM66297.1ArrayExpress:AT4G18050
EnsemblPlantsGene:AT4G18050RefSeq:AT4G18050TAIR:AT4G18050RefSeq:AT4G18050-TAIR-GEnsemblPlants:AT4G18050.2Unigene:At.54385
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640RefSeq:NP_001328203.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664Symbol:PGP9
ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF398SMART:SM00382
SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI00084851EASEG:seg:
Description
PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
Coordinates
chr4:+:10021786..10027415
Molecular Weight (calculated)
135719.0 Da
IEP (calculated)
7.686
GRAVY (calculated)
0.100
Length
1246 amino acids
Sequence
(BLAST)
0001: MKKEEERKER MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV
0101: AFLQVSCWMV TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI
0201: AGAAMSLIMS KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN
0301: GGQVINVIFA VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG
0401: QSGSGKSTVI SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH
0501: GTQMSGGQKQ RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV
0601: RLQEGSKEEA TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS
0701: IAAMVHGTVF PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA
0801: LALIVQNIAT VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV
0901: RLGLLSGAGF GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN
1001: GDIEFRHVSF RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA
1101: YGKTGGATEE EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR
1201: LTTIKNADVI AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.