Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 95.7 | 96.61 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 97.42 | 90.27 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 28.23 | 77.54 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 29.09 | 62.02 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 64.97 | 61.33 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 50.52 | 60.21 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 63.68 | 58.64 |
| Solyc02g071350.2.1 | Tomato | plastid | 63.68 | 58.59 |
| Bra012621.1-P | Field mustard | plasma membrane | 62.65 | 58.38 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 61.96 | 58.11 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 62.56 | 57.84 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 54.04 | 57.56 |
| AT4G18050.2 | Thale cress | plasma membrane | 61.7 | 57.54 |
| KRH21125 | Soybean | plasma membrane | 62.39 | 57.49 |
| KRH11119 | Soybean | plasma membrane | 61.36 | 57.18 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 61.19 | 56.21 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 60.76 | 55.9 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 61.45 | 55.78 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 59.81 | 55.2 |
| AT5G46540.1 | Thale cress | golgi | 58.95 | 54.89 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 59.29 | 54.73 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 59.12 | 54.61 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 58.69 | 54.43 |
| TraesCS3A01G258200.1 | Wheat | peroxisome | 58.35 | 54.24 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 57.83 | 53.42 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 57.92 | 53.12 |
| TraesCS1A01G081300.1 | Wheat | unclear | 58.09 | 52.9 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 60.15 | 52.71 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.97 | 52.33 |
| Bra017539.1-P | Field mustard | plasma membrane | 45.61 | 51.41 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 43.12 | 40.21 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.63 | 40.14 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 42.25 | 39.85 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 43.2 | 39.65 |
| TraesCS6A01G264900.3 | Wheat | golgi | 43.12 | 39.57 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 25.82 | 38.36 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 39.67 | 36.41 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 37.69 | 34.65 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 39.07 | 32.22 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 38.81 | 32.19 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 40.28 | 31.3 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF272 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G117600 | EnsemblPlants:TraesCS3A01G117600.3 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3A:+:87777442..87782795
Molecular Weight (calculated)
125627.0 Da
IEP (calculated)
7.737
GRAVY (calculated)
0.150
Length
1162 amino acids
Sequence
(BLAST)
(BLAST)
0001: TVLLHAEVSC WMVTGERQAA RIRGLYLETI LRQDISFFDV ETSTGEVIER MSSDTVLIQD AIGEKVGKFL QLVSTFLGGF IIAFTRGWLL SLVMLSSIPP
0101: VVAAAAVMSL VLSKLSNRSQ MAYAEAGKVV EQTIGSIRTV ISFTGESRAI SEYKEHLKIS YKSAVHQGFA GGLGVGSLLL IVFCSYGLAV WYGAKLIIEK
0201: GYTGGYIINV LMAIMTGAMA LGQSSPCLTA FASGQIAAHK MFATIYRKPE IDASDKSGLI LENFVGNVEL KDVHFSYPAR PEQLIFNGFS ITIPTGMTVA
0301: LVGESGSGKS TVIGLVERFY DPQSGEVLLD GVNLKQLNLS WVRQKIGLVS QEPILFTTTI RENIEYGKKG ATEEEIRIST VLANAAKFID KLPNGLDTMV
0401: GEHGTQLSGG QKQRIAIARA ILKNPSILLL DEATSALDAE SERVVQDALN NIMVNRTTIV VAHRLSTVKN ADTISVLHRG QLVEQGPHVE LIKDPDGAYS
0501: QLLRLQEVNT KREGSHGDDS SRLQSASDTA NSASQHSSIK PSFGRSMSRY SPQGGSRRNS QTFSLHEHET KGVDDAKSGK NVIRRLLYLH KPEIPILLLG
0601: CTAAAANGAI LPVFGMLLSS AINTFYEPPQ QLRKDSVFWA EMYVILGVIS IFVIPLQYAL FNMAGGKLIE RIRAVSFSRV VYQEIGWFDD PLNSSAAIGS
0701: RLSGDAASVK SIAGDVLSLI VQSISTAVVG IVIAMISNWK LACIVLCFLP CVIAQSYAQT RLMRGFGADA KEMYEQASTI ATDAIGNIRT VASFCAEEKI
0801: IESYRKKCEG PVRQGVRQGA ISGVGYGFSF ALLFCFYAIS FYVGACFVHN GTAEVGQVFR VFFALTMMAV GVSQSSSLAR DFAKVQNAAA SIFKIIDRKS
0901: KIDASHEVGT TLEAVEGNIE LQHVSFKYPA RTDVQIFRDL CLRIPSGKTV ALVGESGSGK STVIALIERF YDPDSGGIFL DGVDLKTLKL TWLRQQIGLV
1001: GQEPVLFNDT IRANIAYGKM EQVSEDEIVA VAKAANADRF ISTLPNGYDT SVGERGVQLS GGQKQRIAIA RAILKNPKLL LLDEATSALD AESERMVQEA
1101: LDRVTVGRTT VVVAHRLSTI TAADKIAVVK NGVVAEEGQH EQLLRLPGGA YASLVALQSS SS
0101: VVAAAAVMSL VLSKLSNRSQ MAYAEAGKVV EQTIGSIRTV ISFTGESRAI SEYKEHLKIS YKSAVHQGFA GGLGVGSLLL IVFCSYGLAV WYGAKLIIEK
0201: GYTGGYIINV LMAIMTGAMA LGQSSPCLTA FASGQIAAHK MFATIYRKPE IDASDKSGLI LENFVGNVEL KDVHFSYPAR PEQLIFNGFS ITIPTGMTVA
0301: LVGESGSGKS TVIGLVERFY DPQSGEVLLD GVNLKQLNLS WVRQKIGLVS QEPILFTTTI RENIEYGKKG ATEEEIRIST VLANAAKFID KLPNGLDTMV
0401: GEHGTQLSGG QKQRIAIARA ILKNPSILLL DEATSALDAE SERVVQDALN NIMVNRTTIV VAHRLSTVKN ADTISVLHRG QLVEQGPHVE LIKDPDGAYS
0501: QLLRLQEVNT KREGSHGDDS SRLQSASDTA NSASQHSSIK PSFGRSMSRY SPQGGSRRNS QTFSLHEHET KGVDDAKSGK NVIRRLLYLH KPEIPILLLG
0601: CTAAAANGAI LPVFGMLLSS AINTFYEPPQ QLRKDSVFWA EMYVILGVIS IFVIPLQYAL FNMAGGKLIE RIRAVSFSRV VYQEIGWFDD PLNSSAAIGS
0701: RLSGDAASVK SIAGDVLSLI VQSISTAVVG IVIAMISNWK LACIVLCFLP CVIAQSYAQT RLMRGFGADA KEMYEQASTI ATDAIGNIRT VASFCAEEKI
0801: IESYRKKCEG PVRQGVRQGA ISGVGYGFSF ALLFCFYAIS FYVGACFVHN GTAEVGQVFR VFFALTMMAV GVSQSSSLAR DFAKVQNAAA SIFKIIDRKS
0901: KIDASHEVGT TLEAVEGNIE LQHVSFKYPA RTDVQIFRDL CLRIPSGKTV ALVGESGSGK STVIALIERF YDPDSGGIFL DGVDLKTLKL TWLRQQIGLV
1001: GQEPVLFNDT IRANIAYGKM EQVSEDEIVA VAKAANADRF ISTLPNGYDT SVGERGVQLS GGQKQRIAIA RAILKNPKLL LLDEATSALD AESERMVQEA
1101: LDRVTVGRTT VVVAHRLSTI TAADKIAVVK NGVVAEEGQH EQLLRLPGGA YASLVALQSS SS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.