Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- plasma membrane 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 96.61 | 95.7 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 96.35 | 88.44 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 28.32 | 77.07 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 29.28 | 61.83 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 65.16 | 60.93 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 50.74 | 59.9 |
| Bra012621.1-P | Field mustard | plasma membrane | 63.42 | 58.54 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 64.03 | 58.4 |
| Solyc02g071350.2.1 | Tomato | plastid | 64.03 | 58.35 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 62.47 | 58.03 |
| KRH21125 | Soybean | plasma membrane | 63.16 | 57.65 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 54.47 | 57.47 |
| AT4G18050.2 | Thale cress | plasma membrane | 62.12 | 57.38 |
| KRH11119 | Soybean | plasma membrane | 61.77 | 57.02 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 61.69 | 56.13 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 61.34 | 55.9 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 60.03 | 55.06 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 60.03 | 55.06 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 60.82 | 54.99 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 60.12 | 54.96 |
| AT5G46540.1 | Thale cress | golgi | 59.43 | 54.81 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 59.86 | 54.6 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 59.6 | 54.49 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 59.77 | 54.39 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 58.64 | 52.73 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 58.47 | 52.46 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 56.56 | 51.46 |
| Bra017539.1-P | Field mustard | plasma membrane | 46.05 | 51.41 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 35.88 | 43.2 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 4.08 | 42.34 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 43.7 | 39.61 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 43.18 | 39.23 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 35.71 | 37.67 |
| HORVU6Hr1G067200.1 | Barley | plastid | 43.09 | 36.61 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 38.92 | 36.39 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 43.01 | 35.08 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 38.31 | 34.78 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 38.84 | 31.72 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 34.49 | 28.54 |
| HORVU3Hr1G117180.10 | Barley | plastid | 34.84 | 28.14 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:HORVU3Hr1G021600 |
| EnsemblPlants:HORVU3Hr1G021600.2 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M0VMZ3 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 |
| PANTHER:PTHR24221:SF272 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI000295CD81 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:72344811..72349879
Molecular Weight (calculated)
124404.0 Da
IEP (calculated)
7.779
GRAVY (calculated)
0.126
Length
1151 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVTGERQSAR IRGLYLETIL RQDISFFDVE TSTGEVIERM SSDTVLIQDA IGEKVGKFLQ LVSTFLGGFI IAFTRGWLLS LVMLSSIPPV VAAAAVMSLV
0101: LSKLSNRSQM AYAEAGKVVE QTIGSIRTVI SFTGESRAIS KYKEHLKISY KSAVHQGIAG GLGVGSLLLI VFCSYGLAVW YGAKLIIEKG YTGGYIINVL
0201: MAIMTGAMAL GQSSPCLTAF ASGQIAAHKM FATIYRKPEI DASDKSGLIL ENFVGDVELK DVHFSYPARP EQLIFNGFSI SIPTGMTVAL VGESGSGKST
0301: VIGLVERFYD PQSGEVLLDG VNLKQLNLSW VRQKIGLVSQ EPILFTTTIR ENIEYGKKGA TEEEIRRSIV LANAAKFIDK LPNGLDTMVG EHGTQLSGGQ
0401: KQRIAIARAI LKNPSILLLD EATSALDAES ERVVQDALNN IMVDRTTIVV AHRLSTVKNA DMISVLHRGQ LVEQGPHVEL MKDPDGAYSQ LLRLQEVNTK
0501: REGSHGDDSN SLQSASGTAN SASQHSSIKP SFGRSMSRYS PQGGSRRNSQ TFSLHEHEAE GVDDAKSGKN VIRRLLYLHK PEVPILLLGC TAAAANGAIL
0601: PVFGMLLSSA INTFYEPPQQ LRKDSIFWAE MYVMLGAISI FVIPLQYGLF NMAGGKLIER IRAVSFSRVV YQEIGWFDDP LNSSGAIGSR LSGDAASVKS
0701: IAGDVLSLIV QSISTAVVGI VIAMIANWKL ACIVLCFLPC VIAQSYAQTR LMRGFGADAK EMYEQASTIA TDAIGNIRTV ASFCAEEKII ESYRKKCEGP
0801: VRQGVRQGAI SGAGYGFSFA LLFCFYAISF YIGARFVHNG TAEVGQVFRV FFALTMMAVG VSQSSSLARD FGKVQNAAAS IFRIIDRKSK IDASQEVGTT
0901: LETVEGNIEL QHVSFKYPAR TDVQIFRDLC LRIPSGKTVA LVGESGSGKS TVIALIERFY DPDSGGIFLD GVDMKTLKLT WLRQQIGLVG QEPVLFNDTI
1001: RANIAYGKME QVSEEEIVAI AEAANAHTFI STLPNGYDTS VGERGVQLSG GQKQRIAIAR AILKNPKLLL LDEATSALDA ESERIVQEAL DRVTVGRTTV
1101: VVAHRLSTIT AADKISVIKN GVVAEEGRHE QLLRLPGGAY ASLVALQSSS S
0101: LSKLSNRSQM AYAEAGKVVE QTIGSIRTVI SFTGESRAIS KYKEHLKISY KSAVHQGIAG GLGVGSLLLI VFCSYGLAVW YGAKLIIEKG YTGGYIINVL
0201: MAIMTGAMAL GQSSPCLTAF ASGQIAAHKM FATIYRKPEI DASDKSGLIL ENFVGDVELK DVHFSYPARP EQLIFNGFSI SIPTGMTVAL VGESGSGKST
0301: VIGLVERFYD PQSGEVLLDG VNLKQLNLSW VRQKIGLVSQ EPILFTTTIR ENIEYGKKGA TEEEIRRSIV LANAAKFIDK LPNGLDTMVG EHGTQLSGGQ
0401: KQRIAIARAI LKNPSILLLD EATSALDAES ERVVQDALNN IMVDRTTIVV AHRLSTVKNA DMISVLHRGQ LVEQGPHVEL MKDPDGAYSQ LLRLQEVNTK
0501: REGSHGDDSN SLQSASGTAN SASQHSSIKP SFGRSMSRYS PQGGSRRNSQ TFSLHEHEAE GVDDAKSGKN VIRRLLYLHK PEVPILLLGC TAAAANGAIL
0601: PVFGMLLSSA INTFYEPPQQ LRKDSIFWAE MYVMLGAISI FVIPLQYGLF NMAGGKLIER IRAVSFSRVV YQEIGWFDDP LNSSGAIGSR LSGDAASVKS
0701: IAGDVLSLIV QSISTAVVGI VIAMIANWKL ACIVLCFLPC VIAQSYAQTR LMRGFGADAK EMYEQASTIA TDAIGNIRTV ASFCAEEKII ESYRKKCEGP
0801: VRQGVRQGAI SGAGYGFSFA LLFCFYAISF YIGARFVHNG TAEVGQVFRV FFALTMMAVG VSQSSSLARD FGKVQNAAAS IFRIIDRKSK IDASQEVGTT
0901: LETVEGNIEL QHVSFKYPAR TDVQIFRDLC LRIPSGKTVA LVGESGSGKS TVIALIERFY DPDSGGIFLD GVDMKTLKLT WLRQQIGLVG QEPVLFNDTI
1001: RANIAYGKME QVSEEEIVAI AEAANAHTFI STLPNGYDTS VGERGVQLSG GQKQRIAIAR AILKNPKLLL LDEATSALDA ESERIVQEAL DRVTVGRTTV
1101: VVAHRLSTIT AADKISVIKN GVVAEEGRHE QLLRLPGGAY ASLVALQSSS S
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.