Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G041060.1 | |
| HORVU7Hr1G110470.7 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G28860.1 | HORVU5Hr1G041060.1 | AT3G21640.1 | 14517332 |
| AT3G28860.1 | HORVU7Hr1G110470.7 | AT5G57090.1 | 17237354 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.42 | 98.73 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 98.42 | 98.66 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.87 | 98.18 |
| Os04t0459000-01 | Rice | plasma membrane | 93.13 | 93.73 |
| EES12287 | Sorghum | cytosol, peroxisome, plasma membrane | 92.58 | 92.95 |
| Zm00001d025590_P002 | Maize | cytosol, nucleus, plasma membrane | 92.5 | 92.07 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 79.01 | 88.82 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 83.58 | 84.72 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 83.27 | 84.47 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 83.03 | 84.23 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 82.95 | 84.15 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 82.87 | 84.0 |
| AT3G28860.1 | Thale cress | plasma membrane | 81.29 | 82.27 |
| Bra025359.1-P | Field mustard | plasma membrane | 80.9 | 81.87 |
| Bra039042.1-P | Field mustard | plasma membrane | 80.9 | 81.87 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 82.0 | 81.81 |
| CDY20012 | Canola | plasma membrane | 80.82 | 81.72 |
| CDY00109 | Canola | plasma membrane | 80.27 | 81.69 |
| CDX86408 | Canola | plasma membrane | 79.72 | 81.65 |
| CDY65012 | Canola | plasma membrane | 80.74 | 81.64 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 71.59 | 79.28 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 38.12 | 50.52 |
| HORVU6Hr1G067200.1 | Barley | plastid | 50.2 | 46.94 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 51.7 | 46.42 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 4.03 | 45.95 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 39.23 | 43.18 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 42.38 | 42.55 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 43.02 | 42.48 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 42.46 | 42.26 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 41.67 | 42.07 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 41.67 | 42.07 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 41.75 | 41.82 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 41.28 | 41.34 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 39.86 | 41.02 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 40.88 | 40.47 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 33.94 | 39.41 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 38.75 | 38.72 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 41.75 | 37.54 |
| HORVU3Hr1G117180.10 | Barley | plastid | 38.28 | 34.04 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 35.12 | 31.99 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:11.2.4.3 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A287ILD6 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0055085 | EnsemblPlantsGene:HORVU2Hr1G080200 | EnsemblPlants:HORVU2Hr1G080200.1 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PFscan:PS51257 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI000B4702DA | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:580583612..580590198
Molecular Weight (calculated)
137467.0 Da
IEP (calculated)
8.650
GRAVY (calculated)
0.139
Length
1267 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEETGKAES SAGAGSCGGG GGGGCEAVKK RAEQSVAFHE LFSFADPLDW LLMAAGSAGA VVHGAAMPVF FLLFGELVNG FGKNQHHLRR MTDEVSKYSL
0101: YFVYLGLVVC ASSYLEIACW MYTGERQVGA LRRRYLEAVL RQDVGFFDTD ARTGDVVFSV STDTLLVQDA IGEKVGNFIH YLATFLAGLV VGFVSAWRLA
0201: LLSIAVIPGI AFAGGLYAYT LTGLTSKSRE SYANAGIIAE QAIAQVRTVY SYVGETKALN SYSEAIQSTL KLGYKAGMAK GLGIGCTYGI ACMSWALVFW
0301: YAGVFIRSGQ TDGGKAFTAI FSAIVGGLSL GQSFSNLGAF SKGKIAGYKL LEVIRQRPTI VQDSTDGRCL DEVHGNIEFK EVSFSYPSRP DVMVFRDFSL
0401: FFPAGKMAAV VGGSGSGKST VVSLIERFYD PNQGQVLLDN ADIKSLQLKW LRDQIGLVNQ EPALFATTII DNILYGKPDA TMAEVEAAAS AANAHSFIAL
0501: LPNGYNTQVG ERGLQLSGGQ KQRIAIARAM LKNPKILLLD EATSALDAGS ESIVQEALDR IMIGRTTVVV AHRLSTIRSV DMIAVIQQGQ VVETGTHDEL
0601: LAKGSSGAYA ALIRFQEMAK NRDFRGASTR KNRSSRLSNS LSTRSLSLRR SGSLRNLSYS YSTGADGRIE MVSNADNDRK YPAPKGYFFK LLKLNAPEWP
0701: YTVLGAIGSI MSGFIGPTFA IVMSNMIEVF YFRDPNAMER KTREYVFIYI GTGFYAVVAY LIQHYFFSIM GENLTTRVRR MMLAVILRND VGWFDEEENN
0801: SSLVAARLNT EAADVKSAIA ERISVILQNM TSLLVSFIVG FIIEWRVAIL ILVTFPLLVL ANFAQQLSMK GFAGDTAKAH AKTSMIAGEG VSNIRTVAAF
0901: NAQDKILSLF CSELRVPQMH SLRRSQVSGV LYGLSQLSLY ASEALILWYG AHLVRHHVST FSRVIKVFVV LVITANSVAE TVSLAPEIIR GGESVRSVFA
1001: VLNSRTRIDP DEPEGEPVEK VRGEIELRHV DFAYPSRPDV MVFKEFSLRI RAGQSQALVG ASGSGKSTVI ALIERFYDPM AGKVMIDGKD IRRLNLKSLR
1101: LKIGLVQQEP VLFATSILEN IGYGKDGVTE EEVVEAAKVA NVHGFVSALP DGYRTPVGER GVQLSGGQKQ PTAIARAVLK GPAILLLDEA TSALDAESEC
1201: VVQEALGRIM KGRTTVLVAH RLSTIRCVDS IAVVQDGRVV EQGSHGDLVS RPDGAYSRLL QLQLHHG
0101: YFVYLGLVVC ASSYLEIACW MYTGERQVGA LRRRYLEAVL RQDVGFFDTD ARTGDVVFSV STDTLLVQDA IGEKVGNFIH YLATFLAGLV VGFVSAWRLA
0201: LLSIAVIPGI AFAGGLYAYT LTGLTSKSRE SYANAGIIAE QAIAQVRTVY SYVGETKALN SYSEAIQSTL KLGYKAGMAK GLGIGCTYGI ACMSWALVFW
0301: YAGVFIRSGQ TDGGKAFTAI FSAIVGGLSL GQSFSNLGAF SKGKIAGYKL LEVIRQRPTI VQDSTDGRCL DEVHGNIEFK EVSFSYPSRP DVMVFRDFSL
0401: FFPAGKMAAV VGGSGSGKST VVSLIERFYD PNQGQVLLDN ADIKSLQLKW LRDQIGLVNQ EPALFATTII DNILYGKPDA TMAEVEAAAS AANAHSFIAL
0501: LPNGYNTQVG ERGLQLSGGQ KQRIAIARAM LKNPKILLLD EATSALDAGS ESIVQEALDR IMIGRTTVVV AHRLSTIRSV DMIAVIQQGQ VVETGTHDEL
0601: LAKGSSGAYA ALIRFQEMAK NRDFRGASTR KNRSSRLSNS LSTRSLSLRR SGSLRNLSYS YSTGADGRIE MVSNADNDRK YPAPKGYFFK LLKLNAPEWP
0701: YTVLGAIGSI MSGFIGPTFA IVMSNMIEVF YFRDPNAMER KTREYVFIYI GTGFYAVVAY LIQHYFFSIM GENLTTRVRR MMLAVILRND VGWFDEEENN
0801: SSLVAARLNT EAADVKSAIA ERISVILQNM TSLLVSFIVG FIIEWRVAIL ILVTFPLLVL ANFAQQLSMK GFAGDTAKAH AKTSMIAGEG VSNIRTVAAF
0901: NAQDKILSLF CSELRVPQMH SLRRSQVSGV LYGLSQLSLY ASEALILWYG AHLVRHHVST FSRVIKVFVV LVITANSVAE TVSLAPEIIR GGESVRSVFA
1001: VLNSRTRIDP DEPEGEPVEK VRGEIELRHV DFAYPSRPDV MVFKEFSLRI RAGQSQALVG ASGSGKSTVI ALIERFYDPM AGKVMIDGKD IRRLNLKSLR
1101: LKIGLVQQEP VLFATSILEN IGYGKDGVTE EEVVEAAKVA NVHGFVSALP DGYRTPVGER GVQLSGGQKQ PTAIARAVLK GPAILLLDEA TSALDAESEC
1201: VVQEALGRIM KGRTTVLVAH RLSTIRCVDS IAVVQDGRVV EQGSHGDLVS RPDGAYSRLL QLQLHHG
0001: MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
Arabidopsis Description
ABCB19ABC transporter B family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.