Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G041060.1 | |
| HORVU7Hr1G110470.7 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G28860.1 | HORVU5Hr1G041060.1 | AT3G21640.1 | 14517332 |
| AT3G28860.1 | HORVU7Hr1G110470.7 | AT5G57090.1 | 17237354 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 97.8 | 98.81 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 98.43 | 98.35 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 97.87 | 98.18 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 93.62 | 93.92 |
| Zm00001d026426_P005 | Maize | cytosol | 93.7 | 93.48 |
| Zm00001d002119_P006 | Maize | cytosol | 92.91 | 93.21 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 44.8 | 92.97 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 77.56 | 87.4 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 81.81 | 83.12 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 81.02 | 82.39 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 80.79 | 82.15 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 80.79 | 82.15 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 81.81 | 82.0 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 80.63 | 81.92 |
| Bra039042.1-P | Field mustard | plasma membrane | 78.82 | 79.95 |
| CDY20012 | Canola | plasma membrane | 78.74 | 79.81 |
| CDY00109 | Canola | plasma membrane | 78.11 | 79.68 |
| AT3G28860.1 | Thale cress | plasma membrane | 78.35 | 79.47 |
| Bra025359.1-P | Field mustard | plasma membrane | 78.27 | 79.39 |
| CDY65012 | Canola | plasma membrane | 78.27 | 79.33 |
| CDX86408 | Canola | plasma membrane | 77.01 | 79.06 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 70.79 | 78.58 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 37.32 | 49.58 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 4.09 | 46.85 |
| HORVU6Hr1G067200.1 | Barley | plastid | 49.69 | 46.57 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 51.18 | 46.07 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 39.61 | 43.7 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 43.94 | 43.49 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 42.83 | 43.35 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 42.83 | 43.35 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 43.07 | 43.34 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 42.91 | 42.81 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 42.44 | 42.61 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 41.5 | 41.66 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 39.69 | 40.94 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 41.18 | 40.86 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 39.92 | 39.98 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 34.25 | 39.87 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 42.05 | 37.9 |
| HORVU3Hr1G117180.10 | Barley | plastid | 38.19 | 34.04 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 34.41 | 31.42 |
Protein Annotations
| MapMan:11.2.4.3 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU2Hr1G115180 | EnsemblPlants:HORVU2Hr1G115180.1 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M0X0N8 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI000295C317 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:734123200..734130012
Molecular Weight (calculated)
137767.0 Da
IEP (calculated)
8.262
GRAVY (calculated)
0.140
Length
1270 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADPAAAEKM EKAANGSAAG GCDAAAPAAG QGKKRADQAV AFHELFSFAD RWDLALMSLG TVGALAHGAA MPCFFLLFGD LINGFGKNQT DLRTMTDEVA
0101: KYALYFVYLG LVVCVASYAE IACWMYTGER QVIALRKAYL DAVLRQDVGF FDTDARTGDI VFGVSTDTLL VQDAIGEKVG NFMHYLATFF AGLVVGFVSA
0201: WRLALLSVAV IPAIAFAGGL YAYTLTGLTS KSRESYANAG VVAEQAIAQV RTVYSFVGES KALNSYSEAI QNTLKLGYKA GMAKGLGIGC TYGIACMSWA
0301: LVFWYAGVFI RNGQSDGGKA FTAIFSAIVG GMSLGQAFSN LGAFSKGKIA GYKLLEVIRQ KPSIVHDHKD GKLLAEVHGN IEFKDVTFSY PSRPDAMIFR
0401: DFSLFFPAGK TVAVVGGSGS GKSTVVALIE RFYDPNEGQV LLDNVDIKTL QLRWLRDQIG LVNQEPALFA TTIIENILYG KPDATIAEVE AAATASNAHS
0501: FISLLPNGYN TMVGERGIQL SGGQKQRIAI ARAMLKDPKI LLLDEATSAL DADSENIVQE ALDRLMVGRT TVIVAHRLCT IRNVNMIAVL QQGQVVETGT
0601: HDELLAKGSS GAYASLIRFQ ETARNRDLGA ASTRRSRSMH LTSSLSTKSL SLRSGSLRNL SYQYSTGADG RIEMISSADN SLKYPAPRGY FFKLLKLNAP
0701: EWPYAVLGAI GSVLSGFIGP TFAIVMGEML DVFYYKDPVE MEKKTKLYVF IYIGTGIYAV VAYLVQHYFF SIMGENLTTR VRRMMLSAIL RNEVGWFDEE
0801: ENNSSLVAAR VAVDAADVKS AIAERISVIL QNITSLMTSF VVGFIIEWRV AILILATFPL LVLANFAQQL SMKGFAGDTA KAHAKSSMVA GEGVSNIRTV
0901: AAFNAQNKVM SLFSHELRIP EEQILRRSQT AGLLYGLSQL CLYCSEALIL WYGSHLVRSH GSTFSKVIKV FVVLVVTANS VAETVSLAPE IIRGGESIRS
1001: IFGILNRATR IEPDDPEAER VTTVRGDIEL RHVDFSYPSR PDIEIFKDFN LKIQAGRSQA LVGASGSGKS TVIALIERFY DPTGGKVMID GKDIRRLNLK
1101: SLRRKIGLVQ QEPVLFASSI LENIAYGKEG ATEEEVIDAA KTANVHAFVS QLPDGYRTAV GERGVQLSGG QKQRIAIARA VLKDPAILLL DEATSALDAE
1201: SESVLQEALE RLMKGRTTVL VAHRLSTIRG VDRIAVVQDG RVVEHGGHSE LVARPEGAYS RLLQLQNHRN
0101: KYALYFVYLG LVVCVASYAE IACWMYTGER QVIALRKAYL DAVLRQDVGF FDTDARTGDI VFGVSTDTLL VQDAIGEKVG NFMHYLATFF AGLVVGFVSA
0201: WRLALLSVAV IPAIAFAGGL YAYTLTGLTS KSRESYANAG VVAEQAIAQV RTVYSFVGES KALNSYSEAI QNTLKLGYKA GMAKGLGIGC TYGIACMSWA
0301: LVFWYAGVFI RNGQSDGGKA FTAIFSAIVG GMSLGQAFSN LGAFSKGKIA GYKLLEVIRQ KPSIVHDHKD GKLLAEVHGN IEFKDVTFSY PSRPDAMIFR
0401: DFSLFFPAGK TVAVVGGSGS GKSTVVALIE RFYDPNEGQV LLDNVDIKTL QLRWLRDQIG LVNQEPALFA TTIIENILYG KPDATIAEVE AAATASNAHS
0501: FISLLPNGYN TMVGERGIQL SGGQKQRIAI ARAMLKDPKI LLLDEATSAL DADSENIVQE ALDRLMVGRT TVIVAHRLCT IRNVNMIAVL QQGQVVETGT
0601: HDELLAKGSS GAYASLIRFQ ETARNRDLGA ASTRRSRSMH LTSSLSTKSL SLRSGSLRNL SYQYSTGADG RIEMISSADN SLKYPAPRGY FFKLLKLNAP
0701: EWPYAVLGAI GSVLSGFIGP TFAIVMGEML DVFYYKDPVE MEKKTKLYVF IYIGTGIYAV VAYLVQHYFF SIMGENLTTR VRRMMLSAIL RNEVGWFDEE
0801: ENNSSLVAAR VAVDAADVKS AIAERISVIL QNITSLMTSF VVGFIIEWRV AILILATFPL LVLANFAQQL SMKGFAGDTA KAHAKSSMVA GEGVSNIRTV
0901: AAFNAQNKVM SLFSHELRIP EEQILRRSQT AGLLYGLSQL CLYCSEALIL WYGSHLVRSH GSTFSKVIKV FVVLVVTANS VAETVSLAPE IIRGGESIRS
1001: IFGILNRATR IEPDDPEAER VTTVRGDIEL RHVDFSYPSR PDIEIFKDFN LKIQAGRSQA LVGASGSGKS TVIALIERFY DPTGGKVMID GKDIRRLNLK
1101: SLRRKIGLVQ QEPVLFASSI LENIAYGKEG ATEEEVIDAA KTANVHAFVS QLPDGYRTAV GERGVQLSGG QKQRIAIARA VLKDPAILLL DEATSALDAE
1201: SESVLQEALE RLMKGRTTVL VAHRLSTIRG VDRIAVVQDG RVVEHGGHSE LVARPEGAYS RLLQLQNHRN
0001: MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
Arabidopsis Description
ABCB19ABC transporter B family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.