Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004930_P001 | |
| Zm00001d046893_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G28860.1 | Zm00001d004930_P001 | AT3G21640.1 | 14517332 |
| AT3G28860.1 | Zm00001d046893_P001 | AT5G57090.1 | 17237354 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 98.04 | 98.58 |
| Zm00001d002119_P006 | Maize | cytosol | 97.72 | 98.26 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 45.33 | 94.28 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 93.48 | 93.7 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 92.46 | 93.64 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 93.09 | 93.6 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 93.09 | 93.23 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 77.93 | 88.02 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 82.48 | 84.0 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 82.01 | 83.59 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 81.85 | 83.43 |
| Zm00001d025590_P002 | Maize | cytosol, nucleus, plasma membrane | 83.35 | 83.35 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 81.54 | 83.11 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 81.23 | 82.72 |
| Bra039042.1-P | Field mustard | plasma membrane | 79.18 | 80.51 |
| CDY20012 | Canola | plasma membrane | 79.1 | 80.37 |
| CDY00109 | Canola | plasma membrane | 78.48 | 80.24 |
| Bra025359.1-P | Field mustard | plasma membrane | 78.79 | 80.11 |
| AT3G28860.1 | Thale cress | plasma membrane | 78.79 | 80.11 |
| CDY65012 | Canola | plasma membrane | 78.71 | 79.97 |
| CDX86408 | Canola | plasma membrane | 77.53 | 79.79 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 71.33 | 79.37 |
| Zm00001d051514_P002 | Maize | mitochondrion | 49.65 | 50.08 |
| Zm00001d031871_P001 | Maize | cytosol | 51.06 | 45.9 |
| Zm00001d053706_P002 | Maize | mitochondrion, plasma membrane | 44.7 | 45.78 |
| Zm00001d016794_P001 | Maize | plasma membrane | 44.62 | 45.22 |
| Zm00001d005528_P001 | Maize | plasma membrane | 41.16 | 43.56 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 43.36 | 43.19 |
| Zm00001d043762_P001 | Maize | cytosol | 42.97 | 42.97 |
| Zm00001d009447_P002 | Maize | plasma membrane | 42.11 | 42.41 |
| Zm00001d011644_P002 | Maize | plasma membrane | 42.5 | 42.1 |
| Zm00001d009448_P001 | Maize | cytosol, peroxisome, plasma membrane | 41.63 | 41.93 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 43.75 | 41.72 |
| Zm00001d044564_P008 | Maize | cytosol, peroxisome, plasma membrane | 42.03 | 40.44 |
| Zm00001d043766_P005 | Maize | cytosol | 40.06 | 39.91 |
| Zm00001d024600_P002 | Maize | peroxisome | 39.12 | 39.43 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 42.73 | 38.88 |
| Zm00001d049565_P001 | Maize | peroxisome | 38.33 | 38.61 |
| Zm00001d047780_P002 | Maize | plasma membrane | 42.5 | 38.29 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 41.24 | 37.37 |
| Zm00001d004442_P001 | Maize | plastid | 39.98 | 33.55 |
Protein Annotations
| Gene3D:1.20.1560.10 | EntrezGene:103642112 | MapMan:11.2.4.3 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A1D6JFL0 |
| InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AQK46566.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI000843EF2C | EnsemblPlantsGene:Zm00001d026426 | EnsemblPlants:Zm00001d026426_P005 | EnsemblPlants:Zm00001d026426_T005 | SEG:seg | : |
Description
ABC transporter B family member 19
Coordinates
chr10:-:145633928..145641419
Molecular Weight (calculated)
138199.0 Da
IEP (calculated)
8.502
GRAVY (calculated)
0.122
Length
1273 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAESAATDGK ADKVANGGGG GGDAAGEGKK RGDQAVAFHE LFSFADKWDL MLMAAGSLGA LAHGAAMPFF FLLFGDLING FGKNQTDLRT MTDEVAKYAL
0101: YFVYLGLVVC VSSYAAAFFR SPEIACWMYT GERQVIALRK AYLDAVLRQD VGFFDTDART GDIVFGVSTD TLLVQDAIGE KVGNFMHYIA TFLAGLVVGF
0201: VSAWRLALLS VAVIPAIAFA GGLYAYTLTG LTSKSRESYT NAGVVAEQAI AQVRTVYSFV GESKALNSYS EAIQNTLKLG YKAGMAKGLG IGCTYGIACM
0301: SWALVFWYAG VFIRNGQSDG GKAFTAIFSA IVGGMSLGQA FSNLGAFSKG KIAGYKLLEV IRQKPSIVND HKDGKWLAEV HGNIEFKEVT FSYPSRPDVI
0401: IFRDFSLFFP AGKTVAVVGG SGSGKSTVVA LIERFYDPNE GQVLLDNVDI KTLQLRWLRD QIGLVNQEPA LFATTILENI LYGKPDATIA EVEAATTASN
0501: AHSFISLLPN GYNTMVGERG IQLSGGQKQR IAIARAMLKN PKILLLDEAT SALDADSESI VQEALDRLMV GRTTVVVAHR LSTIRNVNMI AVIQQGQVVE
0601: TGTHDELLAK GTSGAYASLI RFQETARNRD LGGASSRRSR SIHLTSSLST KSLSLRSGSL RNLSYQYSTG ADGRIEMISN ADNDRKYPAP RGYFFKLLKL
0701: NAPEWPYAVL GAIGSVLSGF IGPTFAIVMG EMLDVFYYRD PNEMEKKTKL YVFIYIGTGI YAVVAYLVQH YFFSIMGENL TTRVRRMMLS AILRNEVGWF
0801: DEEENNSSLV AAHLAVDAAD VKSAIAERIS VILQNMTSLM TSFVVGFIIE WRVAILILAT FPLLVLANFA QQLSMKGFAG DTAKAHAKSS MVAGEGVSNI
0901: RTVAAFNAQS KILSLFSHEL RVPEQQILRR SQTSGLLFGL SQLCLYSSEA LILWYGSHLV RSHGSTFSKV IKVFVVLVVT ANSVAETVSL APEIIRGGES
1001: IRSIFGILNR ATRIEPDDPE SERVTTIRGD IELRHVDFSY PARPDIQIFK DFNLKIQAGR SQALVGASGS GKSTIIALIE RFYDPCGGKV AIDGKDIRTL
1101: NLKSLRRKIG LVQQEPVLFA SSILENIAYG KEGASEEEVV EAAKTANVHG FVSQLPDGYR TAVGERGMQL SGGQKQRIAI ARAVLKDPAI LLLDEATSAL
1201: DAESECVLQE ALERLMKGRT TVLVAHRLST IRGVDRIAVV QDGRVVEHGS HSDLLARPEG AYSRLLQLQH HRV
0101: YFVYLGLVVC VSSYAAAFFR SPEIACWMYT GERQVIALRK AYLDAVLRQD VGFFDTDART GDIVFGVSTD TLLVQDAIGE KVGNFMHYIA TFLAGLVVGF
0201: VSAWRLALLS VAVIPAIAFA GGLYAYTLTG LTSKSRESYT NAGVVAEQAI AQVRTVYSFV GESKALNSYS EAIQNTLKLG YKAGMAKGLG IGCTYGIACM
0301: SWALVFWYAG VFIRNGQSDG GKAFTAIFSA IVGGMSLGQA FSNLGAFSKG KIAGYKLLEV IRQKPSIVND HKDGKWLAEV HGNIEFKEVT FSYPSRPDVI
0401: IFRDFSLFFP AGKTVAVVGG SGSGKSTVVA LIERFYDPNE GQVLLDNVDI KTLQLRWLRD QIGLVNQEPA LFATTILENI LYGKPDATIA EVEAATTASN
0501: AHSFISLLPN GYNTMVGERG IQLSGGQKQR IAIARAMLKN PKILLLDEAT SALDADSESI VQEALDRLMV GRTTVVVAHR LSTIRNVNMI AVIQQGQVVE
0601: TGTHDELLAK GTSGAYASLI RFQETARNRD LGGASSRRSR SIHLTSSLST KSLSLRSGSL RNLSYQYSTG ADGRIEMISN ADNDRKYPAP RGYFFKLLKL
0701: NAPEWPYAVL GAIGSVLSGF IGPTFAIVMG EMLDVFYYRD PNEMEKKTKL YVFIYIGTGI YAVVAYLVQH YFFSIMGENL TTRVRRMMLS AILRNEVGWF
0801: DEEENNSSLV AAHLAVDAAD VKSAIAERIS VILQNMTSLM TSFVVGFIIE WRVAILILAT FPLLVLANFA QQLSMKGFAG DTAKAHAKSS MVAGEGVSNI
0901: RTVAAFNAQS KILSLFSHEL RVPEQQILRR SQTSGLLFGL SQLCLYSSEA LILWYGSHLV RSHGSTFSKV IKVFVVLVVT ANSVAETVSL APEIIRGGES
1001: IRSIFGILNR ATRIEPDDPE SERVTTIRGD IELRHVDFSY PARPDIQIFK DFNLKIQAGR SQALVGASGS GKSTIIALIE RFYDPCGGKV AIDGKDIRTL
1101: NLKSLRRKIG LVQQEPVLFA SSILENIAYG KEGASEEEVV EAAKTANVHG FVSQLPDGYR TAVGERGMQL SGGQKQRIAI ARAVLKDPAI LLLDEATSAL
1201: DAESECVLQE ALERLMKGRT TVLVAHRLST IRGVDRIAVV QDGRVVEHGS HSDLLARPEG AYSRLLQLQH HRV
0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
Arabidopsis Description
ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.