Factsheet for Zm00001d004442_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25805	Sorghum	peroxisome, plastid	89.06	87.27
TraesCS4B01G298100.1	Wheat	mitochondrion, plasma membrane	71.33	82.34
Os03t0181750-00	Rice	plasma membrane	52.01	81.76
TraesCS4D01G296900.1	Wheat	peroxisome	78.77	79.67
TraesCS4A01G006900.1	Wheat	peroxisome	78.38	79.53
HORVU4Hr1G077060.1	Barley	mitochondrion, peroxisome, plastid	69.94	76.28
Os03t0181675-00	Rice	cytosol, nucleus, peroxisome, plastid	26.76	69.64
Bra032855.1-P	Field mustard	cytosol	4.55	58.47
KRH06234	Soybean	peroxisome, plastid	54.78	54.85
PGSC0003DMT400058977	Potato	plastid	54.71	54.35
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	56.49	54.34
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	33.49	40.87
Zm00001d025590_P002	Maize	cytosol, nucleus, plasma membrane	33.95	40.46
Zm00001d002119_P006	Maize	cytosol	33.62	40.28
Zm00001d026426_P005	Maize	cytosol	33.55	39.98
Zm00001d016794_P001	Maize	plasma membrane	32.63	39.41
Zm00001d051514_P002	Maize	mitochondrion	32.63	39.22
Zm00001d011644_P002	Maize	plasma membrane	32.43	38.29
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	32.17	38.18
Zm00001d043762_P001	Maize	cytosol	31.77	37.86
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	30.72	36.87
Zm00001d031871_P001	Maize	cytosol	34.34	36.79
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	32.37	36.78
Zm00001d005528_P001	Maize	plasma membrane	29.07	36.66
Zm00001d009447_P002	Maize	plasma membrane	30.32	36.39
Zm00001d043766_P005	Maize	cytosol	30.52	36.23
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	30.78	35.3
Zm00001d024600_P002	Maize	peroxisome	28.21	33.89
Zm00001d049565_P001	Maize	peroxisome	27.42	32.91
Zm00001d041947_P001	Maize	cytosol, peroxisome, plasma membrane	28.74	31.03
Zm00001d028671_P002	Maize	cytosol, plasma membrane, vacuole	28.48	30.88
Zm00001d047780_P002	Maize	plasma membrane	28.74	30.86

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	UniProt:A0A1D6EFF7	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	ProteinID:ONM18921.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000220F27E	EnsemblPlantsGene:Zm00001d004442
EnsemblPlants:Zm00001d004442_P001	EnsemblPlants:Zm00001d004442_T001	SEG:seg	:	:	:

Description

ABC transporter B family member 19

Coordinates

chr2:+:112221153..112226107

Molecular Weight (calculated)

162394.0 Da

IEP (calculated)

9.392

GRAVY (calculated)

-0.020

Length

1517 amino acids

Sequence
(BLAST)

0001: MDDFSFSRSG THQPPPRRQQ RRSSAFSTPD NSTSFAATPR RTPGRRGGAL DDASWQSSVS WQPADTSWAQ PHGLGAAVGP WAPAGSDAAS RRGPALFRRT
0101: ARDYYLSKRS SRMMMHHHRS SAAQQSRSVA AAAASAAGGG GKRLELQSVV TDASRALVVA PNTSFASNDD VIISTATAGP AAKAVVKYSD DTHYVSREVS
0201: FSRDNRDKLY VPPRRGRNDA PPSFGYDDDA SATSYSRSQH YGGGVDEDDY DLDLDLDLDD DDGEIEVRVG KPVSLAGLFK YSAPLDVVLL VLGCVGAMVN
0301: GGSLPWYSYL FGNFINKVVN TDKSQMMKDV KQISFYMLFL AAAVVVGAYL EIMCWRMIGE RSALRMRREY LKAVLRQEVG FFDTEVSTGE VMQSISSDVA
0401: QIQDVMGDKM AGFVHHVFTF IFGYAVGFSK SWKIALAVFA ATPVMMSCGL AYKAIYGGLT AKDEASYKRA GSVAQQAISS VRTVLSFVME DRLADRYAER
0501: LDRAAPIGIK MGFAKGAGMG VIYLVTYSQW ALALWLGSRL VARGDIKGGD AIACFFGVMV GGRGLALSLS YYAQFAQGRA AAGRVFEIVD RVPDIDAYGG
0601: GGRSLSSVRG RIEFKDVEFA YPSRPEAMVL YNLNLTIPAG KMLALVGVSG GGKSTMFALL ERFYDPTRGT ITLDGQDLSS LNLRWLRSQM GLVGQEPVLF
0701: ATSIIENVMM GKEDATRQEA IAACAKANAH TFVLGLPDGY DTQVGDRGTQ LSGGQKQRIA LARAIIRDPR VLLLDEPTSA LDAESEAVVQ QSIERLSAGR
0801: TVVVIAHRLA TVRNADTIAV LDRGAVVESG RHDDLLARGG PYAALVKLAS DSGRSSGDAG RKSPAAPAGA ATAYNSFTDD SAVYDDMSSL SMSKPRYGGG
0901: ARRTYPRGEA EEDGVGKTKD DASNSKVSVS EIWKLQRREG PLLVLGFLMG INAGAVFSVF PLLLGQAVEV YFDSDTSKMK RQVGALATAV VGLGVACILA
1001: MTGQQGLCGW AGARLTMRVR DRLFRAILRQ EPAWFDEEDN AMGVLVTRLA RDAVAFRSMF GDRYAVLLMA VGSAGVGLGI CFALDWRLTL VAMGCTPLTL
1101: GASYLNLLIN VGPRADDGAY ARASSIAAGA VSNVRTVAAL CAQGNIVGAF NRALDGPASK ARRRSQVMGV ILGLSQGAMY GAYTATLWAG ALFIKRDLSK
1201: FGDVSKIFLI LVLSSFSVGQ LAGLAPDTSG APVAIAGILS ILKRRPAISD EDGSGSGKRR RMIKDGRPIE VELKRVVFAY PSRPDVTVLN EFSVRVKAGS
1301: TVAVVGASGS GKSTVVWLVQ RFYDPAGGKV MVGGIDVREL DLKWLRGECA LVSQEPALFS GSIRENIGFG NPKASWAEIE EAAKEANIHK FIAGLPQGYD
1401: TQVGESGVQL SGGQKQRIAI ARAIVKQSRI LLLDEASSAL DLESEKHVQE ALRKVSRRAT TIVVAHRLST VREADRIAVV AGGRVVEFGG HQELLATHRD
1501: GLYAAMVKAE VEAQAFA

Best Arabidopsis Sequence Match ( AT1G02520.3 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.