Factsheet for Zm00001d008178_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32330	Sorghum	plastid	96.17	96.02
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	94.91	90.86
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	66.9	77.31
PGSC0003DMT400011703	Potato	cytosol	9.86	75.45
GSMUA_Achr1P25070_001	Banana	plasma membrane	51.56	72.74
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.2	70.16
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	70.03	69.81
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	69.8	69.58
CDY25095	Canola	cytosol	65.34	69.24
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	69.72	69.23
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	68.86	69.07
CDX67881	Canola	cytosol	64.87	69.03
CDY48003	Canola	cytosol	63.46	68.04
KRH02481	Soybean	plasma membrane	67.76	67.92
CDY27510	Canola	cytosol	63.69	67.89
CDY51307	Canola	cytosol, peroxisome, plasma membrane	66.98	67.72
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.54	67.7
CDX80072	Canola	cytosol	63.46	67.7
CDY15432	Canola	cytosol	64.48	67.32
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.68	67.11
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.98	67.08
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	67.06	67.06
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	67.29	67.03
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	67.68	66.95
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	67.14	66.72
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	67.61	66.67
CDX89963	Canola	cytosol, nucleus, plasma membrane	65.88	66.61
CDY37776	Canola	cytosol, peroxisome, plasma membrane	64.63	66.45
Bra004484.1-P	Field mustard	cytosol	66.67	66.36
CDY15249	Canola	cytosol, peroxisome, plasma membrane	65.73	66.14
Bra040475.1-P	Field mustard	cytosol	66.35	65.89
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	63.38	65.85
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	62.44	65.84
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	65.02	65.64
CDY24379	Canola	plasma membrane	59.94	65.53
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	62.99	65.5
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	59.31	64.68
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.21	64.58
Solyc06g009290.2.1	Tomato	nucleus	69.56	63.5
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	64.48	63.24
Bra003445.1-P	Field mustard	peroxisome	61.89	63.08
CDY58790	Canola	peroxisome	60.33	62.63
KRH19480	Soybean	plasma membrane	58.61	62.11
CDY51560	Canola	peroxisome	60.41	61.71
KRH02484	Soybean	plasma membrane	60.17	60.74
Solyc12g098840.1.1	Tomato	peroxisome	60.17	60.08
Zm00001d043762_P001	Maize	cytosol	59.47	59.7
PGSC0003DMT400011930	Potato	peroxisome	59.55	59.13
KRH19479	Soybean	plasma membrane	59.86	58.89
Zm00001d005528_P001	Maize	plasma membrane	54.15	57.52
Zm00001d009447_P002	Maize	plasma membrane	56.26	56.88
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	56.1	56.72
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	57.98	56.01
Solyc11g067300.1.1	Tomato	plasma membrane	55.09	55.87
Zm00001d011644_P002	Maize	plasma membrane	56.02	55.72
Zm00001d043766_P005	Maize	cytosol	53.68	53.68
PGSC0003DMT400019085	Potato	plasma membrane	53.21	52.55
Zm00001d051514_P002	Maize	mitochondrion	43.27	43.82
Zm00001d025590_P002	Maize	cytosol, nucleus, plasma membrane	43.43	43.6
Zm00001d002119_P006	Maize	cytosol	43.04	43.44
Zm00001d026426_P005	Maize	cytosol	43.19	43.36
Zm00001d016794_P001	Maize	plasma membrane	41.0	41.72
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	40.38	41.51
Zm00001d031871_P001	Maize	cytosol	42.57	38.42
Zm00001d024600_P002	Maize	peroxisome	37.01	37.45
Zm00001d049565_P001	Maize	peroxisome	36.62	37.03
Zm00001d028671_P002	Maize	cytosol, plasma membrane, vacuole	38.03	34.74
Zm00001d047780_P002	Maize	plasma membrane	38.34	34.68
Zm00001d041947_P001	Maize	cytosol, peroxisome, plasma membrane	38.03	34.59
Zm00001d004442_P001	Maize	plastid	38.18	32.17

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100194270	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AQK89125.1	ProteinID:AQK89126.1	ProteinID:AQK89132.1
ProteinID:AQK89135.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	UniProt:K7V8M7	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF290	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000221F5E1	EnsemblPlantsGene:Zm00001d008178	EnsemblPlants:Zm00001d008178_P001	EnsemblPlants:Zm00001d008178_T001
SEG:seg	:	:	:	:	:

Description

ABC transporter B family member 21

Coordinates

chr8:+:557425..563584

Molecular Weight (calculated)

137469.0 Da

IEP (calculated)

8.752

GRAVY (calculated)

0.163

Length

1278 amino acids

Sequence
(BLAST)

0001: MPESWRPAEA DALQPAAGTA SASGPSARSP GNGAKGRGAG EPPGAAATRV PFHRLFAFAD SADVALMLLG ALGAVANGAA LPFMTVLFGN LIDAFGGALS
0101: VHDVVSRVSM VSLDFVYLAM ASAVASFVQV TCWMITGERQ AARIRNLYLK TILRQEIAFF DKYTSTGEVV GRMSGDTVLI QDAMGEKVGK FVQLLVTFFG
0201: GFIVAFAQGW LLTLVMMATI PPLVLAGAVM SNVVTKMASL GQAAYAESSV VVEQTIGSIR TVASFTGEKR AVDKYNMSLK NAYKSGVREG LATGLGMGTV
0301: MVLLFCGYSL GIWYGAKLIL EKGYTGAKVM NVIFAVLTGS LALGQASPSM KAFAGGQAAA HKMFETINRT PEIDAYSTTG RKLEDVRGDI EFRDVYFSYP
0401: TRPNEQIFKG FSLAIPSGTT IALVGQSGSG KSTVISLIER FYDPQLGDVL IDGVNLKEFQ LRWIRSKIGL VSQEPVLFAA SIKENIAYGK DNATDQEIRA
0501: AAELANAAKF IDKMPQGFDT SVGEHGTQLS GGQKQRIAIA RAILKDPRIL LLDEATSALD AESERIVQEA LDRVMTNRTT VIVAHRLSTV RNADTIAVIH
0601: QGTLVEKGPH SELLRDPEGA YSQLIRLQEA NQQNNGKVDA NARPGKQISI NKSASRRSSR DNSSHHSFSV PFGMPHGIDI QDGSSNKLCD EMPQEVPLSR
0701: LASLNKAEIP VLILGSIASV ISGVIFPIFA ILLSNVIKAF YEPPHLLRRD SQFWASMFLV FGAVYFLSLP VSSYLFSIAG CRLIRRIRLM TFEKVVNMEV
0801: EWFDHPENSS GAIGARLSAD AAKVRGLVGD ALQLVVQNSS TLVAGLVIAF VSNWELSLII LALIPLIGLN GWIQMKFIHG FSADAKMMYE EASQVANDAV
0901: GSIRTVASFS AEEKVMDLYK KKCEGPLRTG IRTGIISGIG FGVSFFLLFG VYAASFYAGA RLVEDRKTTF PKVFRVFLAL AMAAIGVSQS STLTSDSSKA
1001: KSAASSIFAI VDRKSRIDPS EDAGVTVEAL QGNIVFQHVS FKYPTRPDVQ IFRDLCLTIH AGKTVALVGE SGSGKSTAIS LLQRFYDPDV GHILLDGVDI
1101: QKFQLRWLRQ QMGLVSQEPA LFNDTIRANI AYGKDGQATE SEIISAAELA NAHKFISSAL QGYDTVVGER GAQLSGGQKQ RVAIARAIVK DPRILLLDEA
1201: TSALDAESER IVQDALDRVM VNRTTVIVAH RLSTIQNADL IAVVRNGVII EKGKHDALIN IKDGAYASLV ALHSAASS

Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)

0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS

Arabidopsis Description

ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.