Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 88.93 | 96.74 |
| Solyc06g009280.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 79.71 | 86.58 |
| VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 73.21 | 79.03 |
| GSMUA_Achr8P29860_001 | Banana | endoplasmic reticulum | 61.29 | 77.58 |
| Os05t0137200-01 | Rice | plasma membrane | 21.43 | 76.34 |
| KRH69152 | Soybean | cytosol, peroxisome, plasma membrane | 69.71 | 76.13 |
| KRH33644 | Soybean | cytosol, peroxisome, plasma membrane | 69.21 | 75.58 |
| CDX67881 | Canola | cytosol | 64.21 | 74.85 |
| CDY25095 | Canola | cytosol | 64.43 | 74.79 |
| CDY27510 | Canola | cytosol | 63.29 | 73.89 |
| CDY48003 | Canola | cytosol | 62.79 | 73.74 |
| CDX80072 | Canola | cytosol | 62.93 | 73.54 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 66.07 | 73.18 |
| CDY15432 | Canola | cytosol | 63.71 | 72.88 |
| AT1G02520.1 | Thale cress | cytosol, peroxisome, plasma membrane | 66.5 | 72.85 |
| KRH68334 | Soybean | cytosol, peroxisome, plasma membrane | 66.57 | 72.64 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 65.5 | 72.55 |
| Bra003490.1-P | Field mustard | cytosol, nucleus, plasma membrane | 66.93 | 72.52 |
| AT3G62150.2 | Thale cress | cytosol, nucleus, plasma membrane | 67.07 | 72.45 |
| Bra030503.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.93 | 72.34 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 64.21 | 72.33 |
| Bra004484.1-P | Field mustard | cytosol | 66.29 | 72.27 |
| Bra040475.1-P | Field mustard | cytosol | 66.36 | 72.18 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 65.43 | 72.13 |
| GSMUA_Achr1P25070_001 | Banana | plasma membrane | 46.5 | 71.85 |
| Bra033331.1-P | Field mustard | cytosol, nucleus, plasma membrane | 64.93 | 71.8 |
| AT2G47000.1 | Thale cress | cytosol, peroxisome, plasma membrane | 65.86 | 71.7 |
| AT4G01820.1 | Thale cress | peroxisome, plasma membrane, vacuole | 62.07 | 70.71 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 57.64 | 69.93 |
| AT4G01830.1 | Thale cress | golgi, plasma membrane, vacuole | 61.43 | 69.92 |
| KXG32330 | Sorghum | plastid | 63.79 | 69.77 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 63.5 | 69.56 |
| CDY24379 | Canola | plasma membrane | 57.79 | 69.2 |
| Bra002094.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 60.57 | 68.89 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 57.43 | 68.6 |
| Bra003445.1-P | Field mustard | peroxisome | 60.71 | 67.78 |
| CDY58790 | Canola | peroxisome | 59.57 | 67.75 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 63.71 | 66.82 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.57 | 66.51 |
| CDY51560 | Canola | peroxisome | 59.43 | 66.51 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 60.57 | 66.46 |
| TraesCS1A01G081300.1 | Wheat | unclear | 60.57 | 66.46 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 60.57 | 66.1 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.07 | 64.37 |
| Solyc12g098840.1.1 | Tomato | peroxisome | 58.64 | 64.14 |
| GSMUA_Achr9P16700_001 | Banana | plasma membrane | 57.57 | 63.46 |
| Solyc11g067300.1.1 | Tomato | plasma membrane | 54.79 | 60.87 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 54.64 | 60.76 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 54.43 | 60.33 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 41.0 | 45.96 |
| Solyc08g076720.2.1 | Tomato | unclear | 39.79 | 44.31 |
| Solyc05g013890.1.1 | Tomato | cytosol, plasma membrane | 29.93 | 43.92 |
| Solyc09g008240.2.1 | Tomato | peroxisome | 39.71 | 42.31 |
| Solyc03g093650.2.1 | Tomato | plasma membrane | 36.57 | 41.73 |
| Solyc07g018130.1.1 | Tomato | plasma membrane | 36.71 | 40.31 |
| Solyc07g064120.1.1 | Tomato | plasma membrane | 35.79 | 39.79 |
| Solyc06g072960.1.1 | Tomato | peroxisome | 28.71 | 39.11 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 33.79 | 36.81 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | UniProt:K4C3V9 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF292 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | EnsemblPlantsGene:Solyc06g009290.2 | EnsemblPlants:Solyc06g009290.2.1 | TMHMM:TMhelix | UniParc:UPI0002766CDA |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:3249411..3257702
Molecular Weight (calculated)
151525.0 Da
IEP (calculated)
8.700
GRAVY (calculated)
0.071
Length
1400 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLVHKYLMEG DTYLVVESRI QIWILIVDPL SWQFPGTKYK ETAAGREKEK KVSSTAPFEK LSNHFLQGNS NFTTQVKCTA RKAGTHNCTT LQIHNFQQLS
0101: VSLNLKEKKL RSAMAEGNSN GNSGPNEASS SSGGQNNTSQ QDSDKTKQAE KANTVPFYKL FSFADSTDMV LMITGTIAAI GNGLSLPIMT ILFGDLTDSF
0201: GQNQNNKDVV RVVSKVSLEF VYLALGCGVA SFLQVACWMI SGERQASRIR SLYLKTILQQ DIAFYDKETN TGEVVGRMSG DTVLIQDAMG EKVGKFVQLI
0301: STFIGGFVIA FTKGWLLTLV MLSVIPPLVI SGGAMSHVLS KMASSGQDAY AKAATVVEQT IGSIRTVASF TGEKKAVADY NESLVKAYHS GAKEGLATGL
0401: GLGSVFAIIY CSYALAIWYG ARLILEKGYT GGKVINIIIA VLTSSMSLGQ AAPCMSAFAA GQAAAFKMFE TIKRKPEIDA YDTNGKILDD IRGDIELNDV
0501: CFTYPARPDE QIFSGFSLFV SSGTTAALVG QSGSGKSTVI SLIERFYDPQ SGQVLIDGIN LKDFQLKWIR GKIGLVSQEP VLFTASIKEN ILYGKYDATA
0601: EEIKVATELA NAAKFIDKLP QGLDTMVGEH GTQLSGGQKQ RIAIARAILK DPRILLLDEA TSALDAESER VVQEALDRIM INRTTVIVAH RLTTVRNADM
0701: IAVIHRGKVV EKGTHGELLK DPEGAYSQLI RLQEVNNKTD KSGLDERDSI EKSMGSGRQS SQRVSLMRSI SRSSSGVGNS SRRSLSISFG LATGLSVPET
0801: ANTDTETGIQ EVAEKRLEVP IRRLAYLNKP EIPVMIIGTV AAIINGSILP IFGILLSSVI KTFYEPPHEL RKDSKFWALM FVLLGGVTFI AFPARTYLFS
0901: IAGCKLIRRI RSMCFEKVVR MEVGWFDDSE HSTGIIGARL SADAAAVRGL VGDALAQMVQ DIATSIVGLA IAFEASWQLA LIILVMIPLI GLNGYIQIKF
1001: MKGFSANAKV MYEEASQVAN DAVGGIRTVA SFCAEEKVME IYKRKCEGPL KAGIKQGLIS GIGFGVSFAL LFCVYATSFY AGARLVQAGQ ITFSDVFRVF
1101: FSLTMAAIGI SQSSSLAPDS SKAKSAAASV FAILDRKSKI DPSDESGMTL DTVKGDIELK HVSFKYPTRP DVQILRDLCL TIRSGKTVAL VGESGCGKST
1201: VISLLQRFYD PDSGQISLDG IEIQKFQVKW LRQQMGLVSQ EPVLFNDTIR ANIAYGKEGN ATEAEVLAAA ELANAHKFIS GLQQSYDTTV GERGTQLSGG
1301: QKQRVAIARA ILKNPKILLL DEATSALDAE SERIVQDALD RVMVNRTTVV VAHRLSTIKG ADVIAVVKNG VIVEKGKHDT LINIKDGFYS SLVALHTSAS
0101: VSLNLKEKKL RSAMAEGNSN GNSGPNEASS SSGGQNNTSQ QDSDKTKQAE KANTVPFYKL FSFADSTDMV LMITGTIAAI GNGLSLPIMT ILFGDLTDSF
0201: GQNQNNKDVV RVVSKVSLEF VYLALGCGVA SFLQVACWMI SGERQASRIR SLYLKTILQQ DIAFYDKETN TGEVVGRMSG DTVLIQDAMG EKVGKFVQLI
0301: STFIGGFVIA FTKGWLLTLV MLSVIPPLVI SGGAMSHVLS KMASSGQDAY AKAATVVEQT IGSIRTVASF TGEKKAVADY NESLVKAYHS GAKEGLATGL
0401: GLGSVFAIIY CSYALAIWYG ARLILEKGYT GGKVINIIIA VLTSSMSLGQ AAPCMSAFAA GQAAAFKMFE TIKRKPEIDA YDTNGKILDD IRGDIELNDV
0501: CFTYPARPDE QIFSGFSLFV SSGTTAALVG QSGSGKSTVI SLIERFYDPQ SGQVLIDGIN LKDFQLKWIR GKIGLVSQEP VLFTASIKEN ILYGKYDATA
0601: EEIKVATELA NAAKFIDKLP QGLDTMVGEH GTQLSGGQKQ RIAIARAILK DPRILLLDEA TSALDAESER VVQEALDRIM INRTTVIVAH RLTTVRNADM
0701: IAVIHRGKVV EKGTHGELLK DPEGAYSQLI RLQEVNNKTD KSGLDERDSI EKSMGSGRQS SQRVSLMRSI SRSSSGVGNS SRRSLSISFG LATGLSVPET
0801: ANTDTETGIQ EVAEKRLEVP IRRLAYLNKP EIPVMIIGTV AAIINGSILP IFGILLSSVI KTFYEPPHEL RKDSKFWALM FVLLGGVTFI AFPARTYLFS
0901: IAGCKLIRRI RSMCFEKVVR MEVGWFDDSE HSTGIIGARL SADAAAVRGL VGDALAQMVQ DIATSIVGLA IAFEASWQLA LIILVMIPLI GLNGYIQIKF
1001: MKGFSANAKV MYEEASQVAN DAVGGIRTVA SFCAEEKVME IYKRKCEGPL KAGIKQGLIS GIGFGVSFAL LFCVYATSFY AGARLVQAGQ ITFSDVFRVF
1101: FSLTMAAIGI SQSSSLAPDS SKAKSAAASV FAILDRKSKI DPSDESGMTL DTVKGDIELK HVSFKYPTRP DVQILRDLCL TIRSGKTVAL VGESGCGKST
1201: VISLLQRFYD PDSGQISLDG IEIQKFQVKW LRQQMGLVSQ EPVLFNDTIR ANIAYGKEGN ATEAEVLAAA ELANAHKFIS GLQQSYDTTV GERGTQLSGG
1301: QKQRVAIARA ILKNPKILLL DEATSALDAE SERIVQDALD RVMVNRTTVV VAHRLSTIKG ADVIAVVKNG VIVEKGKHDT LINIKDGFYS SLVALHTSAS
0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST
Arabidopsis Description
ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.