Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G01820.1 | Thale cress | peroxisome, plasma membrane, vacuole | 86.67 | 86.74 |
| CDY24379 | Canola | plasma membrane | 79.11 | 83.23 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 78.94 | 82.85 |
| Bra002094.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 82.44 | 82.37 |
| Bra003445.1-P | Field mustard | peroxisome | 82.44 | 80.86 |
| CDY58790 | Canola | peroxisome | 80.89 | 80.83 |
| CDY51560 | Canola | peroxisome | 80.65 | 79.3 |
| AT1G02520.1 | Thale cress | cytosol, peroxisome, plasma membrane | 81.3 | 78.25 |
| GSMUA_Achr8P29860_001 | Banana | endoplasmic reticulum | 62.6 | 69.62 |
| Os05t0137200-01 | Rice | plasma membrane | 22.03 | 68.96 |
| KRH69152 | Soybean | cytosol, peroxisome, plasma membrane | 71.3 | 68.41 |
| VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 72.03 | 68.31 |
| KRH33644 | Soybean | cytosol, peroxisome, plasma membrane | 70.98 | 68.1 |
| AT2G47000.1 | Thale cress | cytosol, peroxisome, plasma membrane | 71.06 | 67.96 |
| KRH68334 | Soybean | cytosol, peroxisome, plasma membrane | 70.41 | 67.5 |
| AT3G62150.2 | Thale cress | cytosol, nucleus, plasma membrane | 71.06 | 67.44 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 70.33 | 67.21 |
| GSMUA_Achr1P25070_001 | Banana | plasma membrane | 48.46 | 65.78 |
| Solyc06g009280.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 68.78 | 65.63 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 63.74 | 64.69 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 60.0 | 63.95 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 65.85 | 63.38 |
| KXG32330 | Sorghum | plastid | 65.85 | 63.28 |
| Solyc06g009290.2.1 | Tomato | nucleus | 69.92 | 61.43 |
| AT4G18050.2 | Thale cress | plasma membrane | 61.71 | 60.91 |
| TraesCS1A01G081300.1 | Wheat | unclear | 62.93 | 60.66 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 62.76 | 60.5 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.68 | 60.47 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 65.53 | 60.37 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 62.76 | 60.17 |
| AT5G46540.1 | Thale cress | golgi | 58.62 | 57.77 |
| GSMUA_Achr9P16700_001 | Banana | plasma membrane | 59.19 | 57.32 |
| AT3G28860.1 | Thale cress | plasma membrane | 44.96 | 44.17 |
| AT1G10680.1 | Thale cress | plasma membrane | 43.9 | 44.01 |
| AT4G25960.1 | Thale cress | plasma membrane | 44.88 | 43.36 |
| AT1G27940.1 | Thale cress | peroxisome, plasma membrane, vacuole | 41.87 | 41.37 |
| AT2G36910.1 | Thale cress | peroxisome | 42.85 | 40.98 |
| AT3G28345.1 | Thale cress | plasma membrane | 40.89 | 40.56 |
| AT3G28390.1 | Thale cress | plasma membrane | 39.92 | 40.08 |
| AT3G28360.1 | Thale cress | plasma membrane | 39.67 | 39.74 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 37.97 | 33.17 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 37.24 | 32.55 |
Protein Annotations
| MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | EntrezGene:826974 | InterPro:AAA+_ATPase | ProteinID:AAD22645.1 | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AEE82082.1 | ProteinID:ANM67552.1 | ArrayExpress:AT4G01830 |
| EnsemblPlantsGene:AT4G01830 | RefSeq:AT4G01830 | TAIR:AT4G01830 | RefSeq:AT4G01830-TAIR-G | EnsemblPlants:AT4G01830.1 | TAIR:AT4G01830.1 |
| Unigene:At.54091 | ProteinID:CAB80676.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0010540 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | RefSeq:NP_001329375.1 | RefSeq:NP_192092.1 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | Symbol:PGP5 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF292 | UniProt:Q9SYI3 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI000009FCFD | SEG:seg | : | : | : |
Description
ABCB5ABC transporter B family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYI3]
Coordinates
chr4:-:785663..790447
Molecular Weight (calculated)
133091.0 Da
IEP (calculated)
7.304
GRAVY (calculated)
0.236
Length
1230 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKKGNLEANT KTVPFYKLFF FSDSTDVLLM IVGSIGAIAN GVCSPLMTLL FGELIDAMGP NQNNEEIVER VSKVCLSLVY LGLGALGAAF LQVACWMITG
0101: ERQAARIRSL YLKTILRQDI GFFDVEMTTG EVVGRMSGDT VLILDAMGEK VGKFIQLIST FVGGFVIAFL RGWLLTLVML TSIPLLAMSG AAIAIIVTRA
0201: SSQEQAAYAK ASNVVEQTLG SIRTVASFTG EKQAMSSYKE LINLAYKSNV KQGFVTGLGL GVMFLVFFST YALGTWFGGE MILRKGYTGG AVINVMVTVV
0301: SSSIALGQAS PCLTAFTAGK AAAYKMFETI EREPLIDTFD LNGKVLEDIR GEIELRDVCF SYPARPKEEV FGGFSLLIPS GTTTALVGES GSGKSTVISL
0401: IERFYDPNSG QVLIDGVDLK EFQLKWIRGK IGLVSQEPVL FSSSIMENIG YGKEGATVEE IQAASKLANA AKFIDKLPLG LETLVGEHGT QLSGGQKQRI
0501: AIARAILKDP RILLLDEATS ALDAESERVV QEALDRIMVN RTTVIVAHRL STVRNADIIA VIHRGKIVEE GSHSELLKDH EGAYSQLLRL QEINKESKRL
0601: EISDGSISSG SSRGNNSTRQ DDDSFSVLGL LAGQDSTKMS QELSQKVSFT RIAALNKPEI PILILGTLVG AVNGTIFPIF GILFAKVIEA FFKAPHELKR
0701: DSRFWSMIFV LLGVAAVIVY PTTNYLFAIA GGRLIRRIRS MCFEKVVHME VGWFDEPGNS SGAMGARLSA DAALIRTLVG DSLCLSVKNV ASLVTGLIIA
0801: FTASWEVAII ILVIIPFIGI NGYIQIKFMK GFSADAKAKY EEASQVANDA VGSIRTVASF CAEEKVMEMY KKRCEDTIKS GIKQGLISGV GFGISFFVLY
0901: SVYASCFYVG ARLVKAGRTN FNDVFQVFLA LTLTAVGISQ ASSFAPDSSK GKGAAVSIFR IIDRISKIDS RDESGMVLEN VKGDIELCHI SFTYQTRPDV
1001: QVFRDLCLSI RAGQTVALVG ESGSGKSTVI SLLQRFYDPD SGHITLDGVE LKKLRLKWLR QQMGLVGQEP VLFNDTIRAN IAYGKGGEEA TEAEIIAASE
1101: LANAHRFISS IQKGYDTVVG ERGIQLSGGQ KQRVAIARAI VKEPKILLLD EATSALDAES ERVVQDALDR VMVNRTTIVV AHRLSTIKNA DVIAVVKNGV
1201: IAEKGTHETL INIEGGVYAS LVQLHINASN
0101: ERQAARIRSL YLKTILRQDI GFFDVEMTTG EVVGRMSGDT VLILDAMGEK VGKFIQLIST FVGGFVIAFL RGWLLTLVML TSIPLLAMSG AAIAIIVTRA
0201: SSQEQAAYAK ASNVVEQTLG SIRTVASFTG EKQAMSSYKE LINLAYKSNV KQGFVTGLGL GVMFLVFFST YALGTWFGGE MILRKGYTGG AVINVMVTVV
0301: SSSIALGQAS PCLTAFTAGK AAAYKMFETI EREPLIDTFD LNGKVLEDIR GEIELRDVCF SYPARPKEEV FGGFSLLIPS GTTTALVGES GSGKSTVISL
0401: IERFYDPNSG QVLIDGVDLK EFQLKWIRGK IGLVSQEPVL FSSSIMENIG YGKEGATVEE IQAASKLANA AKFIDKLPLG LETLVGEHGT QLSGGQKQRI
0501: AIARAILKDP RILLLDEATS ALDAESERVV QEALDRIMVN RTTVIVAHRL STVRNADIIA VIHRGKIVEE GSHSELLKDH EGAYSQLLRL QEINKESKRL
0601: EISDGSISSG SSRGNNSTRQ DDDSFSVLGL LAGQDSTKMS QELSQKVSFT RIAALNKPEI PILILGTLVG AVNGTIFPIF GILFAKVIEA FFKAPHELKR
0701: DSRFWSMIFV LLGVAAVIVY PTTNYLFAIA GGRLIRRIRS MCFEKVVHME VGWFDEPGNS SGAMGARLSA DAALIRTLVG DSLCLSVKNV ASLVTGLIIA
0801: FTASWEVAII ILVIIPFIGI NGYIQIKFMK GFSADAKAKY EEASQVANDA VGSIRTVASF CAEEKVMEMY KKRCEDTIKS GIKQGLISGV GFGISFFVLY
0901: SVYASCFYVG ARLVKAGRTN FNDVFQVFLA LTLTAVGISQ ASSFAPDSSK GKGAAVSIFR IIDRISKIDS RDESGMVLEN VKGDIELCHI SFTYQTRPDV
1001: QVFRDLCLSI RAGQTVALVG ESGSGKSTVI SLLQRFYDPD SGHITLDGVE LKKLRLKWLR QQMGLVGQEP VLFNDTIRAN IAYGKGGEEA TEAEIIAASE
1101: LANAHRFISS IQKGYDTVVG ERGIQLSGGQ KQRVAIARAI VKEPKILLLD EATSALDAES ERVVQDALDR VMVNRTTIVV AHRLSTIKNA DVIAVVKNGV
1201: IAEKGTHETL INIEGGVYAS LVQLHINASN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.