Factsheet for VIT_07s0005g02660.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	79.34	80.27
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	79.26	80.19
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	79.03	79.64
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	66.92	78.48
Os05t0137200-01	Rice	plasma membrane	23.59	77.86
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	76.41	77.24
CDX67881	Canola	cytosol	70.62	76.27
CDY25095	Canola	cytosol	70.86	76.2
CDY48003	Canola	cytosol	69.93	76.09
CDY27510	Canola	cytosol	70.24	75.98
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.56	75.73
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	75.17	75.64
CDX80072	Canola	cytosol	69.78	75.54
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	70.16	75.08
CDY51307	Canola	cytosol, peroxisome, plasma membrane	73.09	75.0
CDX89963	Canola	cytosol, nucleus, plasma membrane	72.94	74.84
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	73.63	74.73
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	74.63	74.69
CDY15432	Canola	cytosol	70.32	74.51
Bra040475.1-P	Field mustard	cytosol	73.86	74.44
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	73.79	74.42
CDY15249	Canola	cytosol, peroxisome, plasma membrane	72.86	74.41
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.17	74.37
CDY37776	Canola	cytosol, peroxisome, plasma membrane	71.24	74.34
Bra004484.1-P	Field mustard	cytosol	73.55	74.3
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	73.79	74.07
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	72.24	74.01
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	69.39	73.23
Solyc06g009290.2.1	Tomato	nucleus	79.03	73.21
GSMUA_Achr1P25070_001	Banana	plasma membrane	50.89	72.85
OQU77362	Sorghum	mitochondrion, plasma membrane	64.76	72.79
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	68.31	72.03
CDY24379	Canola	plasma membrane	64.84	71.94
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.85	71.49
KXG32330	Sorghum	plastid	70.47	71.41
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	70.16	71.2
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	64.23	71.08
Bra003445.1-P	Field mustard	peroxisome	67.16	69.46
CDY58790	Canola	peroxisome	65.69	69.21
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	66.92	68.08
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	70.01	68.02
CDY51560	Canola	peroxisome	65.54	67.95
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	66.77	67.87
TraesCS1A01G081300.1	Wheat	unclear	66.77	67.87
VIT_10s0003g02540.t01	Wine grape	plasma membrane	64.15	67.59
HORVU1Hr1G017460.3	Barley	plasma membrane	66.69	67.42
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	28.3	67.34
VIT_10s0003g02570.t01	Wine grape	plasma membrane	62.37	65.29
GSMUA_Achr9P16700_001	Banana	plasma membrane	62.53	63.86
VIT_10s0003g02580.t01	Wine grape	plasma membrane	61.37	62.92
VIT_14s0108g00430.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.87	45.52
VIT_14s0066g02320.t01	Wine grape	peroxisome	40.17	45.03
VIT_02s0012g01660.t01	Wine grape	plasma membrane	42.95	44.81
VIT_18s0001g14660.t01	Wine grape	peroxisome, plasma membrane, vacuole	40.02	42.54
VIT_01s0137g00350.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	40.56	42.01
VIT_11s0016g03160.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	39.24	41.55
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	38.86	41.14
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.56	39.81
VIT_17s0000g09760.t01	Wine grape	plasma membrane	35.77	38.76
VIT_16s0098g00570.t01	Wine grape	cytosol, plasma membrane, vacuole	34.77	37.96
VIT_13s0019g00310.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	37.55	37.46
VIT_06s0004g04100.t01	Wine grape	cytosol	39.01	36.01
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	38.7	31.83

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100267452	wikigene:100267452	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM456718	ProteinID:CAN76787
ProteinID:CAN76787.1	ProteinID:CCB60077	ProteinID:CCB60077.1	ncoils:Coil	UniProt:F6HZG2	EMBL:FN596502
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
EntrezGene:LOC100267452	wikigene:LOC100267452	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF290	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TIGR:TC69843	TMHMM:TMhelix	UniParc:UPI00015CAA43	ArrayExpress:VIT_07s0005g02660	EnsemblPlantsGene:VIT_07s0005g02660
EnsemblPlants:VIT_07s0005g02660.t01	unigene:Vvi.6372	RefSeq:XP_002273987	RefSeq:XP_002273987.1	RefSeq:XP_010652340.1	SEG:seg

Description

No Description!

Coordinates

chr7:-:4974331..4981303

Molecular Weight (calculated)

140060.0 Da

IEP (calculated)

7.981

GRAVY (calculated)

0.118

Length

1297 amino acids

Sequence
(BLAST)

0001: MAEENDLNGK TYMHEATTSS RGALETETVK SSGQNGKQQD SEKSKEEGKP STVPFHKLFS FADSTDMLLM ITGTIGAAGN GICMPLMAIL FGDLIDSFGQ
0101: NQNNKDVVDI VSKVSLKFVY LAVGAGIAAF FQVACWMVTG ERQAARIRSL YLKTILRQDV AFFDKETNTG EVIGRMSGDT VLIQDAMGEK VGKFIQLVST
0201: FIGGFIIAFI KGWLLTLVML SSIPLLVIAG GAMSLFLSKM ATRGQNAYAK AATVVEQTIG SIRTVASFTG EKQAVTKYNQ FLVNAYKSGV FEGLAAGLGL
0301: GTVMFIIFAS YALAVWFGAK MILEKGYTGG TVLNVIIAVL TGSMSLGQAS PCMSAFAAGQ AAAFKMFQTI HRKPEIDVSD TKGKKLEDIQ GEIELRDVYF
0401: SYPARPDEQI FSGFSLSIPS GTTAALVGQS GSGKSTVISL IERFYDPLAG EVLIDGINLK EFQLRWIRGK IGLVSQEPVL FTSSIRDNIA YGKEGATIEE
0501: IRAAAELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRV AIARAILKDP RILLLDEATS ALDAESERVV QEALDRIMVN RTTIIVAHRL STVRNADMIG
0601: VIHRGKMVEK GSHTELLKDP EGAYSQLIRL QEVNKESENQ ATDSQDRPDG SIEFGRQSSQ RMSFLRSISR GSSGPGNSSR HSFSVSFGLP TGLGLPDNAI
0701: ADAEAPRSSE QPPEVPIRRL AYLNKPEIPV LLLGTVAAIV NGTILPIFGI LISSVIKTFY EPPHQLRKDS NFWALIFLVL GVVSFLAFPA RTYLFSVAGC
0801: KLIQRVRSMC FEKVVHMEVG WFDQPEHSSG AIGARLSADA ATIRALVGDA LAQVVQNAAS AIAGLAIAFA ASWQLAFIIL ALIPLIGLNG YVQIKFLKGF
0901: SADAKMMYEE ASQVANDAVG SIRTVASFCA EEKVMDLYKK KCEGPMRTGI RQGLVSGIGF GVSFFLLFCV YALCFYAGAR LVEAGKTTFG DVFRVFFALT
1001: MATVGISQSS SFSPDSSKAK SAAASIFTII DRKSTIDPSD ESGTKLENVK GEIELRHISF KYPTRPDIQI FRDLSLTIRS GKTVALVGES GSGKSTVIAL
1101: LQRFYDPDSG HITLDGVDIQ SLQLRWLRQQ MGLVSQEPVL FNDTIRANIA YGKEGHTTEA EVIAASELAN AHKFISGLQQ GYDTMVGERG IQLSGGQKQR
1201: VAIARAMVKS PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR LSTIKGADVI AVVKNGVIVE KGKHETLINI KDGFYASLIA LHMSASS

Best Arabidopsis Sequence Match ( AT3G62150.3 )
(BLAST)

0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST

Arabidopsis Description

ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.