Factsheet for VIT_14s0066g02320.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	76.75	72.49
AT3G28345.1	Thale cress	plasma membrane	76.66	71.53
CDX86445	Canola	plasma membrane	76.84	71.46
Bra025326.1-P	Field mustard	plasma membrane	76.66	71.3
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	65.25	70.63
CDX85192	Canola	plasma membrane	77.01	70.21
CDY04018	Canola	plasma membrane	74.24	69.22
Os02t0190300-01	Rice	plasma membrane	73.73	68.51
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	73.21	68.14
OQU84543	Sorghum	endoplasmic reticulum, plasma membrane	72.52	67.88
Os02t0189800-00	Rice	mitochondrion	43.04	66.58
AT3G28390.1	Thale cress	plasma membrane	70.44	66.53
AT3G28360.1	Thale cress	plasma membrane	69.75	65.72
TraesCS4A01G370600.1	Wheat	plasma membrane	69.92	65.67
TraesCS7D01G068400.1	Wheat	plasma membrane	69.92	65.67
Os02t0190000-00	Rice	plasma membrane	70.53	65.65
Bra025331.1-P	Field mustard	plasma membrane	64.13	65.14
EES05229	Sorghum	plasma membrane	65.25	60.69
Zm00001d016794_P001	Maize	plasma membrane	65.77	60.59
VIT_17s0000g09760.t01	Wine grape	plasma membrane	56.09	54.22
VIT_01s0137g00350.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	57.39	53.04
VIT_11s0016g03160.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	55.14	52.08
VIT_14s0108g00430.t01	Wine grape	cytosol, peroxisome, plasma membrane	47.28	43.76
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	20.57	43.67
VIT_10s0003g02540.t01	Wine grape	plasma membrane	44.6	41.92
VIT_18s0001g14660.t01	Wine grape	peroxisome, plasma membrane, vacuole	43.73	41.48
VIT_02s0012g01660.t01	Wine grape	plasma membrane	44.43	41.35
VIT_10s0003g02570.t01	Wine grape	plasma membrane	43.04	40.19
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.03	40.17
VIT_10s0003g02580.t01	Wine grape	plasma membrane	42.78	39.13
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.73	39.1
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.29	38.7
VIT_16s0098g00570.t01	Wine grape	cytosol, plasma membrane, vacuole	38.29	37.29
GSMUA_Achr1P18340_001	Banana	plasma membrane	66.64	36.85
VIT_13s0019g00310.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	37.86	33.69
VIT_06s0004g04100.t01	Wine grape	cytosol	37.34	30.75
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	40.8	29.93

Protein Annotations

EntrezGene:100854950	wikigene:100854950	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM470465	ProteinID:CAN63836	ProteinID:CAN63836.1
ProteinID:CCB58580	ProteinID:CCB58580.1	ncoils:Coil	UniProt:F6HV62	EMBL:FN596252	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	EntrezGene:LOC100854950
wikigene:LOC100854950	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF381	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	UniParc:UPI000210A197	ArrayExpress:VIT_14s0066g02320	EnsemblPlantsGene:VIT_14s0066g02320	EnsemblPlants:VIT_14s0066g02320.t01	unigene:Vvi.21488
unigene:Vvi.24085	RefSeq:XP_003633838	RefSeq:XP_003633838.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr14:+:28532848..28538587

Molecular Weight (calculated)

125951.0 Da

IEP (calculated)

8.714

GRAVY (calculated)

0.090

Length

1157 amino acids

Sequence
(BLAST)

0001: MALYEGYCWS RTAERQATRM RARYLKAVLR QDVGYFDLHV TSTAEVITSV SNDSLVIQDV LSEKVPNFLM NAATFLGSYI AAFAMLWRLA IVGFPFVVVL
0101: VIPGLMYGRT LMGLARTIRE EYNKAGTIAE QAISSIRTVY SFVGESKTRS DFSAALQGSV KLGLRQGLAK GLAIGSNGIV FAIWSFMSWY GSRMVMYHGA
0201: RGGTVFVVGA AIAVGGLSLG AGLSNLKYFS EACSAGERIM EMIKRVPKID SDNMEGQILE NVSGEVEFRH VEFAYPSRPE SIIFKDFNLK IPAGKTVALV
0301: GGSGSGKSTA ISLLQRFYDP LGGEILLDGV AIDKLQLKWV RSQMGLVSQE PALFATTIKE NILFGKEDAV MEEVVAAAKA SNAHNFICQL PQGYDTQVGE
0401: RGVQMSGGQK QRIAIARAII KAPQILLLDE ATSALDSESE RVVQEALDNA AVGRTTIIIA HRLSTIRNAD IITVVQNGQI METGSHDDLI QNDDGLYTSL
0501: VRLQQTEKSE APSLPISSTA AISTSMDLHS TSSRRLSLVS RSSSANSNAP SRPAGEVFTA AEQDFPVPSF RRLLAMNLPE WKQASMGCLS AVLFGAVQPV
0601: YAFAMGSMIS VYFFPEHDEI KKKTRTYALC FVGLAVFSFL VNISQHYNFA AMGEYLTKRV RERMFSKILT FEVGWFDQDQ NSTGAICSRL AKDANVVRSL
0701: VGDRMALLVQ TFSAVIIACT MGLVIAWRLA VVMIAVQPLI IVCYYTRRVL LKSMSAKGIK AQEESSKLAA EAVSNLRIIT AFSSQARILK MLEAAQEGPL
0801: RESIRQSWFA GIGLGTSQSL MTCTWALDFW YGGKLISQGY ISSKALFETF MILVSTGRVI ADAGSMTSDL AKGSDAVGSV FAVLDRYTRI EPEDPDGHQP
0901: EKIIGRVEIR DVDFAYPARP DVLVFKSFSI NIDAGKSTAL VGQSGSGKST IIGLIERFYD PLQGSVKIDG KDIRSYHLRV LRKHIALVSQ EPTLFAGTIR
1001: ENIAYGASDK IDESEIIEAA RAANAHDFIA GLKNGYDTWC GDRGVQLSGG QKQRVAIARA ILKNPAVLLL DEATSALDSQ SEKVVQDALE RVMVGRTSVV
1101: VAHRLSTIQN CDLIAVLDKG KVVEKGTHSS LLGKGPSGAY YSLVNLQRRP NTSNMVN

Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)

0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG

Arabidopsis Description

ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.