Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048379 | Potato | golgi, peroxisome, plasma membrane | 73.14 | 78.8 |
| Solyc03g093650.2.1 | Tomato | plasma membrane | 78.12 | 78.0 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 55.02 | 68.43 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 68.57 | 68.24 |
| Bra025425.1-P | Field mustard | peroxisome, plasma membrane, vacuole | 68.49 | 67.61 |
| VIT_14s0066g02320.t01 | Wine grape | peroxisome | 52.08 | 55.14 |
| VIT_19s0085g00060.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 50.29 | 50.29 |
| VIT_17s0000g09760.t01 | Wine grape | plasma membrane | 47.67 | 48.79 |
| VIT_01s0137g00350.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 49.8 | 48.72 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 19.18 | 43.12 |
| VIT_18s0001g14660.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 41.71 | 41.89 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 42.61 | 41.76 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 41.22 | 40.63 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 40.73 | 40.54 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 40.41 | 39.95 |
| VIT_05s0020g00890.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 41.47 | 39.26 |
| VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 41.55 | 39.24 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 39.59 | 38.34 |
| VIT_16s0098g00570.t01 | Wine grape | cytosol, plasma membrane, vacuole | 36.49 | 37.63 |
| VIT_08s0007g05060.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 41.55 | 37.59 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 34.2 | 32.23 |
| VIT_09s0002g00750.t01 | Wine grape | peroxisome, plastid | 40.73 | 31.64 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 34.86 | 30.39 |
Protein Annotations
| EntrezGene:100249029 | wikigene:100249029 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:CCB51487 | ProteinID:CCB51487.1 | UniProt:F6HGL1 |
| EMBL:FN595756 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | EntrezGene:LOC100249029 | wikigene:LOC100249029 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF228 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI00021081F4 | ArrayExpress:VIT_11s0016g03160 | EnsemblPlantsGene:VIT_11s0016g03160 |
| EnsemblPlants:VIT_11s0016g03160.t01 | RefSeq:XP_002280453 | RefSeq:XP_002280453.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:+:2530796..2536294
Molecular Weight (calculated)
134052.0 Da
IEP (calculated)
8.547
GRAVY (calculated)
0.137
Length
1225 amino acids
Sequence
(BLAST)
(BLAST)
0001: MERKESKSIV VIFRYADWVD LVLMFLGTVG AIGDGMSTNC LLVFVSRLMN SLGYGNTQKN HGNFMDEVEK CSLYFVYLAL AVMVVAFMEG YCWSRTSERQ
0101: VLRIRYKYLE AVLRQEVGFF DSQEATTSEI INSISKDTSL IQEVLSEKVP TFLMHASVFI SGLAFATYFS WRLSLVAFPL LLLLIIPGMV YGKYLLYLSK
0201: KCFKEYGKAN SIVEQALSSI KTVYSFTAER RIVERYSAIL DKTTSLGIKQ GIAKGLAVGS TGLSFAIWAF LSWYGSRLVM YKGESGGRIY AAGISFILGG
0301: LSLGMALPDV KYFTEASVAA TRIFDRIDRI PEIDGEDDKG LVLDKILGEL EFEHVNFTYP SRPDSIVLKD FNLKVQAGKT VALVGASGSG KSTAIALLQR
0401: FYDADHGVIR IDGVDIRTLQ LKWIRGKMGL VSQEHALFGT SIKENIIFGK PNATMDEVVA AAMAANAHNF IRQLPEGYET KVGERGALLS GGQKQRIAIA
0501: RAIIKNPVIL LLDEATSALD SESETLVQNA LDQASMGRTT LVVAHKLATV RNADLIAVMN GGCVIEIGSH HDLINKKNGH YAKLAKMQRQ FSCDDQEQNS
0601: ETWISSVARS SAGRPSTATS SPALFASPLP DDNPKPAISH HPPSFSRLLS LNSPEWKQGL IGSLSAIAFG AVQPVYALTI GGMISAFFLP SHAEIRARVE
0701: TYSLIFSSLT LISIILNLIQ HYNFAYMGAH LTKRIRLSML NKILTFEAAW FDEEQNSSGV LCSRLSNEAS IVKSLVADRV SLLVQTTSSV TIAMVLGLAV
0801: AWKLALVMIA VQPLTILCFY TRKVLLSNIS NNVVEAQNQS TQIAVEAVYN HRIVTSFGSV GKVLQLFDEA QEEPRKEAMK KSWLAGIGMG SALCLTFMSW
0901: ALDFWYGGKL VESGQISAGD VFKTFFVLVS TGKVIADAGS MTSDLAKGST AVASVFEILD RQSLIPGSYN AGDNMAGTKL EKMSGGIEIK KVDFAYPSRK
1001: ESLVLRQFCL EVKPGTSIGL VGKSGCGKST VIGLIQRFYD ADKGTVKVDG VDIRELDLGW YRMHMALVSQ EPVIYSGSIR DNILFGKLDA SENEVVEAAR
1101: AANAHEFISS LKDGYETECG ERGVQLSGGQ KQRITIARAI IRNPIVLLLD EATSALDVQS EQVVQEALDR IMVGRTTIVV AHRLNTIKKL DSIAFVSEGK
1201: VVERGTYAQL KSKRGAFFNL ASLQK
0101: VLRIRYKYLE AVLRQEVGFF DSQEATTSEI INSISKDTSL IQEVLSEKVP TFLMHASVFI SGLAFATYFS WRLSLVAFPL LLLLIIPGMV YGKYLLYLSK
0201: KCFKEYGKAN SIVEQALSSI KTVYSFTAER RIVERYSAIL DKTTSLGIKQ GIAKGLAVGS TGLSFAIWAF LSWYGSRLVM YKGESGGRIY AAGISFILGG
0301: LSLGMALPDV KYFTEASVAA TRIFDRIDRI PEIDGEDDKG LVLDKILGEL EFEHVNFTYP SRPDSIVLKD FNLKVQAGKT VALVGASGSG KSTAIALLQR
0401: FYDADHGVIR IDGVDIRTLQ LKWIRGKMGL VSQEHALFGT SIKENIIFGK PNATMDEVVA AAMAANAHNF IRQLPEGYET KVGERGALLS GGQKQRIAIA
0501: RAIIKNPVIL LLDEATSALD SESETLVQNA LDQASMGRTT LVVAHKLATV RNADLIAVMN GGCVIEIGSH HDLINKKNGH YAKLAKMQRQ FSCDDQEQNS
0601: ETWISSVARS SAGRPSTATS SPALFASPLP DDNPKPAISH HPPSFSRLLS LNSPEWKQGL IGSLSAIAFG AVQPVYALTI GGMISAFFLP SHAEIRARVE
0701: TYSLIFSSLT LISIILNLIQ HYNFAYMGAH LTKRIRLSML NKILTFEAAW FDEEQNSSGV LCSRLSNEAS IVKSLVADRV SLLVQTTSSV TIAMVLGLAV
0801: AWKLALVMIA VQPLTILCFY TRKVLLSNIS NNVVEAQNQS TQIAVEAVYN HRIVTSFGSV GKVLQLFDEA QEEPRKEAMK KSWLAGIGMG SALCLTFMSW
0901: ALDFWYGGKL VESGQISAGD VFKTFFVLVS TGKVIADAGS MTSDLAKGST AVASVFEILD RQSLIPGSYN AGDNMAGTKL EKMSGGIEIK KVDFAYPSRK
1001: ESLVLRQFCL EVKPGTSIGL VGKSGCGKST VIGLIQRFYD ADKGTVKVDG VDIRELDLGW YRMHMALVSQ EPVIYSGSIR DNILFGKLDA SENEVVEAAR
1101: AANAHEFISS LKDGYETECG ERGVQLSGGQ KQRITIARAI IRNPIVLLLD EATSALDVQS EQVVQEALDR IMVGRTTIVV AHRLNTIKKL DSIAFVSEGK
1201: VVERGTYAQL KSKRGAFFNL ASLQK
0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG
Arabidopsis Description
ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.