Factsheet for Bra025425.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64952	Canola	peroxisome, plasma membrane, vacuole	78.4	98.78
VIT_11s0016g03160.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	67.61	68.49
PGSC0003DMT400048379	Potato	golgi, peroxisome, plasma membrane	60.44	65.96
Solyc03g093650.2.1	Tomato	plasma membrane	64.54	65.28
Bra032855.1-P	Field mustard	cytosol	5.64	59.32
HORVU3Hr1G068650.8	Barley	peroxisome, plasma membrane	57.94	58.41
Bra025326.1-P	Field mustard	plasma membrane	49.48	49.36
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	41.82	48.55
Bra025331.1-P	Field mustard	plasma membrane	43.19	47.06
Bra025359.1-P	Field mustard	plasma membrane	41.66	41.29
Bra039042.1-P	Field mustard	plasma membrane	41.34	40.97
Bra032856.1-P	Field mustard	plasma membrane	40.29	40.36
Bra013936.1-P	Field mustard	plasma membrane	39.97	40.19
Bra019907.1-P	Field mustard	plasma membrane	39.56	40.08
Bra019135.1-P	Field mustard	plasma membrane	39.16	39.16
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.71	38.02
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.93	37.94
Bra004484.1-P	Field mustard	cytosol	39.0	37.69
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.68	37.62
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.16	37.62
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.53	37.59
Bra040475.1-P	Field mustard	cytosol	38.84	37.45
Bra003445.1-P	Field mustard	peroxisome	37.79	37.4
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.55	36.81
Bra012621.1-P	Field mustard	plasma membrane	36.99	36.81
Bra017539.1-P	Field mustard	plasma membrane	28.61	34.43
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	35.54	31.43
Bra005036.1-P	Field mustard	mitochondrion	35.54	31.32
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	34.49	30.57

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra025425	EnsemblPlants:Bra025425.1	EnsemblPlants:Bra025425.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4E9G9	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221
PANTHER:PTHR24221:SF228	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000253FA08
SEG:seg	:	:	:	:	:

Description

AT3G28345 (E=0.0) | ABC transporter family protein

Coordinates

chrA06:-:21583765..21591792

Molecular Weight (calculated)

136654.0 Da

IEP (calculated)

8.604

GRAVY (calculated)

0.050

Length

1241 amino acids

Sequence
(BLAST)

0001: MASREKTESV SSKSSCNIHV IFRFADWIDI VLMVLGTVGA IGDGMSTNVA LVFASKIMNS LGYGQNNHHT FKDEVQKCSL YFVYLGLAIL GVAFMEGYCW
0101: SKTSERQVEK IRRTYLKAVL RQEVSFFESE DASISEIIHT ISTDTSLIQQ LLSEKVPIFL MHTSVFITGL VFAAYFSWRL TLVAIPSLVL LLIPGLIYGK
0201: YLVYLSKKSY KEYAKANSIV EQALSSIKTI LSFTAETQII KSYSEILERH KKLGLKQGLA KGLAVGSTGI SFTIWAFLAW YGSRLVMHKQ ETGGRIYAAG
0301: ISFILSGLSL GTALTEIRYF SEASVAAARI CSRIDRVPDI DGEDTTKGFI PNAKIEGRVE FEHVTFTYPS RQKSIILRDF NLRADAGKTV ALMGASGSGK
0401: STVIALLQRF YDPAEGFVRI DGFDIKTLQL KWMREQIGVV SQDHALFGTS IKENIMFGKD NASMDEVISA AKAANADEFI TQLPDGYDTQ IGDRGGLLSG
0501: GQKQRIAIAR AIIRNPVILL LDEATSALDA ESETLIQVSL DQVAAGRTTL VVAHKLSTVR GADLIAVLEN GSVKEMGSHE DLMTKNNHYA KLINIQRQFS
0601: SQEHRQDLQD GSKTPEGRQY WSARNSFSRL SIRSTPDLIA SPIPFESIHS AEPDDNLPST SFTRLLPLVS PEWKSSLLGC ISAATFGAIQ PIYALNIGGM
0701: ISAFFATSSK QMQDRIRIYS LIFISLTFIS MTLNLIQHYS FAKMGERLMQ RLRLRMLEKI FTFEPAWFDV EENSSGELCS RLSNEASTVK SIVSDRISLL
0801: VQTISGVLIA MVIGLLVAWK LALVMIAVQP LSVFCFYTKK VLLTSISHNY AYAQNRSSNI ASEAVYNHKI VTSLGSTKKI IEIFDKAQDE ARRKGKKAAW
0901: LAGFGMGSAQ CLTFMTWALD FWYGGVLVEK GEISAGDVFK TFFVLVSTGK VIAEAGSMTS DLAKGSAAIS SVFKILDRPS SQDNTTHGAK IDAITGRIEL
1001: KKVDFSYPNR PSIPVLQQFS LDIKPGTSIG LVGTSGCGKS TVIALIQRFY DVEKGCVKID GVDLREIDIK WYRKHTALVS QEPVVYSGSI RENILLGRPE
1101: AAEDEVMEAA KAANAHDFIS AMEEGYETEC GERGVQLSGG QKQRLAIARA FLRNPVILLL DEVTSSLDSD SEQAVQEALA RIMASRKMTT VVVAHRLNTL
1201: KKLDRIAVIA DGTVVETGSY DRLKNMGGQF SRLLQAHDLK S

Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)

0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG

Arabidopsis Description

ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.