Factsheet for Bra003490.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67881	Canola	cytosol	92.18	99.17
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	95.2	94.91
Bra040475.1-P	Field mustard	cytosol	83.2	83.53
Bra004484.1-P	Field mustard	cytosol	82.89	83.41
Os05t0137200-01	Rice	plasma membrane	22.91	75.32
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	63.31	73.96
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	73.3	73.87
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	73.22	73.79
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.07	73.79
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	72.76	73.04
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	71.36	72.83
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.05	71.94
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	70.51	71.01
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.36	70.52
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.8	70.11
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	65.48	69.8
GSMUA_Achr1P25070_001	Banana	plasma membrane	48.84	69.65
Bra003445.1-P	Field mustard	peroxisome	66.72	68.74
OQU77362	Sorghum	mitochondrion, plasma membrane	61.07	68.37
KXG32330	Sorghum	plastid	67.11	67.73
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	66.95	67.68
Solyc06g009290.2.1	Tomato	nucleus	72.52	66.93
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	64.94	65.75
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	64.78	65.65
TraesCS1A01G081300.1	Wheat	unclear	64.71	65.52
HORVU1Hr1G017460.3	Barley	plasma membrane	64.47	64.93
Bra012621.1-P	Field mustard	plasma membrane	62.54	64.8
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	66.56	64.42
Bra032855.1-P	Field mustard	cytosol	5.65	61.86
GSMUA_Achr9P16700_001	Banana	plasma membrane	59.98	61.02
Bra017539.1-P	Field mustard	plasma membrane	46.52	58.29
Bra025359.1-P	Field mustard	plasma membrane	44.5	45.93
Bra039042.1-P	Field mustard	plasma membrane	44.43	45.85
Bra013936.1-P	Field mustard	plasma membrane	42.26	44.25
Bra019907.1-P	Field mustard	plasma membrane	41.72	44.0
Bra019135.1-P	Field mustard	plasma membrane	42.26	44.0
Bra032856.1-P	Field mustard	plasma membrane	41.87	43.66
Bra025326.1-P	Field mustard	plasma membrane	41.02	42.6
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	34.67	41.91
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.8	41.33
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.57	41.08
Bra025331.1-P	Field mustard	plasma membrane	36.07	40.91
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	37.62	39.16
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	37.77	34.86
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	37.85	34.85
Bra005036.1-P	Field mustard	mitochondrion	37.69	34.59

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra003490	EnsemblPlants:Bra003490.1	EnsemblPlants:Bra003490.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719
GO:GO:0009987	GO:GO:0010315	GO:GO:0010328	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	GO:GO:0060919	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	UniProt:M4CH07	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI00025418DE	SEG:seg	:

Description

AT3G62150 (E=0.0) PGP21 | PGP21 (P-GLYCOPROTEIN 21); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA07:-:13456805..13462000

Molecular Weight (calculated)

139673.0 Da

IEP (calculated)

6.549

GRAVY (calculated)

0.100

Length

1292 amino acids

Sequence
(BLAST)

0001: MDGIMESEEG LKVDSPNRTE AETSNSKTPE EEVKTEAVLK EEKKKTDEKK KKEEDDEKTK TVPFYKLFAF ADSFDIILMI LGTIGAVGNG LGFPIMTILF
0101: GDVIDVFGQN QNSSDVSDKI AKVALKFVYL GLGTLVAALL QVSGWMISGE RQAGRIRSLY LKTILRQDIA FFDVETNTGE VVGRMSGDTV LIQDAMGEKV
0201: GKAIQLISTF IGGFVIAFAE GWLLTLVMVS SIPLLVISGA ALAIVISKMA SRGQTSYAKA AVVVEQTVGS IRTVASFTGE KQAISSYNKH LVSAYRAGVF
0301: EGASTGIGLG TLNIVIFCTY ALAVWYGGKM ILEKGYTGGQ VLIIIFAVLT GSMSLGQASP CLSAFAAGQA AAYKMFETIK RKPEIDASDT TGKVLDDVRG
0401: DIELIDVNFS YPARPEEQIF RGFSLSISSG STVALVGQSG SGKSTVVSLI ERFYDPQSGE VRIDGVNLKE FKLKWIRSKI GLVSQEPVLF TSSIKENIAY
0501: GKEDATVEEI RKATELANAS KFIDKLPQGL DTMVGEHGTQ LSGGQKQRIA VARAILKDPR ILLLDEATSA LDAESERIVQ EALDRIMVNR TTVVVAHRLS
0601: TVRNADMIAV IHQGKIVEKG SHSELLRDPE GAYSQLIRLQ EDNKKSEDST EEQKISTESM KRSSLRKSSL SRSLSKRSPS FSMFGFPAGI EATNETKPEI
0701: KEDETVHKKV SFLRVAALNK PEIPMLILGS IAAVLNGVIL PIFGILISSV IKAFFKPPEQ LKSDTSFWAL IFMLLGVASM VVYPAQTIFF SIAGCKLVQR
0801: IRSMCFEKVV HMEVGWFDET ENSSGAIGAR LSADAATVRG LVGDALAQTV QNLASVTAGV VIAFVASWQL AFIVLAMLPL IGLNGYIYMK FMVGFSADAK
0901: RMYEEASQVA NDAVGSIRTV ASFCAEERVM KMYKKKCEGP MKTGIRQGIV SGIGFGVSFF VLFASYAASF YAGARLVDDG KTTFDAVFRV FFALTMAAVA
1001: ISQSSSLSPD SSKASNAAAS IFAVIDRESK IDPSDESGRV LDDVKGDIEL RHVSFKYPSR PDVQIFQDLC LSIRAGKTIA LVGESGSGKS TVIALLQRFY
1101: DPDSGQITLD GVEIKTLQLK WLRQQTGLVS QEPVLFNETI RANIAYGKGG DASETEIISA AELSNAHGFI SGLQQGYDTM VGERGVQLSG GQKQRVAIAR
1201: AIVKDPKVLL LDEATSALDA ESERVVQDAL DRVMVNRTTV VVAHRLSTIK NADVIAVVKN GVIVEKGKHD TLINIKDGVY ASLVQLHLSA ST

Best Arabidopsis Sequence Match ( AT3G62150.3 )
(BLAST)

0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST

Arabidopsis Description

ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.