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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25095 Canola cytosol 98.25 97.84
Bra003490.1-P Field mustard cytosol, nucleus, plasma membrane 99.17 92.18
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 96.42 89.35
CDY27510 Canola cytosol 85.01 85.15
CDX80072 Canola cytosol 84.1 84.31
CDY48003 Canola cytosol 82.26 82.89
CDY37776 Canola cytosol, peroxisome, plasma membrane 82.02 79.24
Os05t0137200-01 Rice plasma membrane 24.56 75.06
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 68.03 73.87
CDX89963 Canola cytosol, nucleus, plasma membrane 75.6 71.84
CDY15249 Canola cytosol, peroxisome, plasma membrane 75.6 71.5
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 76.27 70.62
KRH69152 Soybean cytosol, peroxisome, plasma membrane 75.27 70.51
KRH33644 Soybean cytosol, peroxisome, plasma membrane 75.19 70.44
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 75.27 70.24
CDY51307 Canola cytosol, peroxisome, plasma membrane 73.61 69.94
CDY15432 Canola cytosol 71.11 69.77
KRH68334 Soybean cytosol, peroxisome, plasma membrane 72.77 68.12
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 72.86 67.88
GSMUA_Achr1P25070_001 Banana plasma membrane 50.79 67.33
CDY24379 Canola plasma membrane 65.45 67.24
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 67.69 67.08
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 65.28 66.89
CDY58790 Canola peroxisome 68.28 66.61
OQU77362 Sorghum mitochondrion, plasma membrane 62.78 65.34
CDY51560 Canola peroxisome 68.03 65.31
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 69.03 64.87
KXG32330 Sorghum plastid 69.11 64.84
Solyc06g009290.2.1 Tomato nucleus 74.85 64.21
CDX84897 Canola cytosol 6.24 63.56
CDY35168 Canola golgi, peroxisome, plasma membrane 57.54 63.34
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 66.86 62.93
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 66.69 62.82
TraesCS1A01G081300.1 Wheat unclear 66.61 62.7
HORVU1Hr1G017460.3 Barley plasma membrane 66.53 62.28
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 68.53 61.65
CDX86437 Canola cytosol 7.41 59.73
GSMUA_Achr9P16700_001 Banana plasma membrane 62.11 58.74
CDX86442 Canola cytosol, mitochondrion, plastid 3.16 55.88
CDX86408 Canola plasma membrane 45.96 44.62
CDY00109 Canola plasma membrane 45.88 44.26
CDY65012 Canola plasma membrane 46.05 44.13
CDY20012 Canola plasma membrane 45.8 43.89
CDX93393 Canola plasma membrane 44.38 43.51
CDX94395 Canola plasma membrane 44.63 43.44
CDY37953 Canola plasma membrane 44.21 43.35
CDX92739 Canola plasma membrane 44.38 42.95
CDY27639 Canola plasma membrane 43.13 42.53
CDX89380 Canola plasma membrane 44.55 41.96
CDX86445 Canola plasma membrane 42.38 40.92
CDY42770 Canola golgi, plasma membrane, vacuole 38.13 40.35
CDX85192 Canola plasma membrane 42.46 40.19
CDY04018 Canola plasma membrane 41.3 39.97
CDY46744 Canola cytosol, peroxisome, plasma membrane 44.3 39.76
CDX79704 Canola plasma membrane 44.38 39.75
CDX84896 Canola plasma membrane 33.39 38.15
CDY64952 Canola peroxisome, plasma membrane, vacuole 28.23 34.42
CDY65312 Canola cytosol 39.3 33.74
CDX76106 Canola cytosol, golgi, peroxisome 39.3 33.71
CDY24958 Canola mitochondrion, plasma membrane, plastid 39.05 33.62
CDY20443 Canola cytosol, mitochondrion, plasma membrane 39.13 33.55
CDY07647 Canola cytosol 39.05 33.48
CDY53591 Canola cytosol, mitochondrion, plasma membrane 38.88 33.17
CDY21871 Canola endoplasmic reticulum, plasma membrane 1.58 26.39
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078BSZ5InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDX67881ProteinID:CDX67881ProteinID:CDX67881.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00099082001InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0004EE45F6SEG:seg:::
Description
BnaA07g19210D
Coordinates
chrLK031787:-:2740175..2745136
Molecular Weight (calculated)
129745.0 Da
IEP (calculated)
6.301
GRAVY (calculated)
0.105
Length
1201 amino acids
Sequence
(BLAST)
0001: MDGIMESEEG LKVDSPNRTE AETSNSKTPE EEVKTESKEE DDEKTKTVPF HKLFAFADSF DIILMILGTI GAVGNGLGFP IMTILFGDVI DVFGQNQNSS
0101: DVSDKIAKVA LKFVYLGLGT LVAALLQVSG WMISGERQAG RIRSLYLKTI LRQDIAFFDV ETNTGEVVGR MSGDTVLIQD AMGEKVGKAI QLISTFIGGF
0201: VIAFAEGWLL TLVMVSSIPL LVISGAALAI VISKMASRGQ TSYAKAAVVV EQTVGSIRTV ASFTGEKQAI SSYNKHLVSA YRAGVFEGAS TGLGLGTLNI
0301: VIFCTYALAV WYGGKMILEK GYTGGQVLII IFAVLTGSMS LGQASPCLSA FAAGQAAAYK MFETIKRKPE INASDTTGKV LDDVRGDIEL RDVNFSYPAR
0401: PEEQIFRGFS LSISSGSTVA LVGQSGSGKS TVVSLIERFY DPQSGEVRID GVNLKEFQLK WIRSKIGLVS QEPVLFTSSI KENIAYGKED ATVEEIRKAT
0501: ELANASKFID KLPQGLDTMV GEHGTQLSGG QKQRIAVARA ILKDPRILLL DEATSALDAE SERIVQEALD RIMVNRTTVV VAHRLSTVRN ADMIAVIHQG
0601: KIVEKGSHSE LLRDPEGAYS QLIRLQEDNK KSEDSTEEQK ISMESMKRSS LRKSSLSRVI KAFFKPPEQL KSDTSFWAII FMLLGVASMV VYPAQTIFFS
0701: IAGCKLVQRI RSMCFEKVVH MEVGWFDETE NSSGAIGARL SADAATVRGL VGDALAQTVQ NLASVTAGVV IAFVASWQLA FIVLAMLPLI GLNGYIYMKF
0801: MVGFSADAKR MYEEASQVAN DAVGSIRTVA SFCAEERVMK MYKKKCEGPM KTGIRQGIVS GIGFGVSFFV LFASYAASFY AGARLVDDGK TTFDAVFRVF
0901: FALTMAAVAI SQSSSLSPDS SKASNAAASI FAVIDRESKI DPSDESGRVL DDVKGDIELR HVSFKYPSRP DVQIFQDLCL SIRAGKTIAL VGESGSGKST
1001: VIALLQRFYD PDSGQITLDG VEIKTLQLKW LRQQTGLVSQ EPVLFNETIR ANIAYGKGGD ASETEIISAA ELSNAHGFIS GLQKGYDTMV GERGVQLSGG
1101: QKQRVAIARA IVKDPKVLLL DEATSALDAE SERVVQDALD RVMVNRTTVV VAHRLSTIKN ADVIAVVKNG VIVEKGKHDT LISIKDGVYA SLVQLHLSAS
1201: T
Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.