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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019907.1-P Field mustard plasma membrane 98.45 98.45
CDY37953 Canola plasma membrane 98.12 98.12
AT1G10680.1 Thale cress plasma membrane 88.82 88.67
CDX94395 Canola plasma membrane 80.16 79.58
CDX92739 Canola plasma membrane 78.2 77.2
CDX89380 Canola plasma membrane 80.33 77.18
CDY42770 Canola golgi, plasma membrane, vacuole 70.69 76.3
VIT_02s0012g01660.t01 Wine grape plasma membrane 76.24 75.14
KRH74394 Soybean plasma membrane 75.18 73.92
KRH39563 Soybean peroxisome 75.02 73.82
Solyc08g076720.2.1 Tomato unclear 74.53 72.63
PGSC0003DMT400045176 Potato peroxisome 74.29 72.39
KRH45417 Soybean plasma membrane 73.06 71.37
EES05688 Sorghum plasma membrane 72.82 70.79
Os02t0693700-02 Rice plasma membrane 72.41 70.17
TraesCS6A01G264900.3 Wheat golgi 72.49 70.14
Zm00001d051514_P002 Maize mitochondrion 72.24 70.13
TraesCS6D01G250000.1 Wheat golgi 72.16 70.1
TraesCS6B01G291900.1 Wheat peroxisome 72.0 69.83
HORVU6Hr1G067170.3 Barley endoplasmic reticulum, vacuole 51.02 65.38
HORVU6Hr1G067200.1 Barley plastid 72.16 65.24
CDX84897 Canola cytosol 5.8 60.17
CDX86437 Canola cytosol 7.18 59.06
CDX86408 Canola plasma membrane 50.53 50.04
CDY20012 Canola plasma membrane 50.78 49.64
CDY00109 Canola plasma membrane 50.45 49.64
CDY65012 Canola plasma membrane 50.53 49.4
CDY27639 Canola plasma membrane 47.76 48.03
CDX86442 Canola cytosol, mitochondrion, plastid 2.61 47.06
CDX84896 Canola plasma membrane 38.78 45.2
CDY35168 Canola golgi, peroxisome, plasma membrane 40.16 45.1
CDX67881 Canola cytosol 43.51 44.38
CDY25095 Canola cytosol 43.59 44.28
CDY46744 Canola cytosol, peroxisome, plasma membrane 48.24 44.17
CDY27510 Canola cytosol 43.18 44.12
CDX80072 Canola cytosol 43.1 44.07
CDY48003 Canola cytosol 42.78 43.96
CDX79704 Canola plasma membrane 48.0 43.85
CDY15432 Canola cytosol 43.43 43.46
CDX89963 Canola cytosol, nucleus, plasma membrane 44.73 43.35
CDY24379 Canola plasma membrane 41.31 43.28
CDY15249 Canola cytosol, peroxisome, plasma membrane 44.82 43.23
CDY58790 Canola peroxisome 43.43 43.22
CDY51307 Canola cytosol, peroxisome, plasma membrane 44.57 43.2
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 40.73 42.58
CDY37776 Canola cytosol, peroxisome, plasma membrane 42.94 42.32
CDY51560 Canola peroxisome 42.78 41.89
CDX86445 Canola plasma membrane 42.04 41.4
GSMUA_Achr4P17010_001 Banana peroxisome 36.57 40.54
CDX85192 Canola plasma membrane 41.96 40.5
CDY04018 Canola plasma membrane 40.98 40.45
CDY24958 Canola mitochondrion, plasma membrane, plastid 41.63 36.56
CDY64952 Canola peroxisome, plasma membrane, vacuole 29.39 36.55
CDY20443 Canola cytosol, mitochondrion, plasma membrane 41.8 36.55
CDY07647 Canola cytosol 41.63 36.4
CDY65312 Canola cytosol 41.47 36.31
CDY53591 Canola cytosol, mitochondrion, plasma membrane 41.63 36.22
CDX76106 Canola cytosol, golgi, peroxisome 41.31 36.14
CDY21871 Canola endoplasmic reticulum, plasma membrane 1.8 30.56
Protein Annotations
MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078E1D7InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDX93393ProteinID:CDX93393ProteinID:CDX93393.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00156050001InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF415SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0004EE51F9SEG:seg:::
Description
BnaA06g06550D
Coordinates
chrLK031876:+:1983..8974
Molecular Weight (calculated)
134001.0 Da
IEP (calculated)
6.923
GRAVY (calculated)
0.176
Length
1225 amino acids
Sequence
(BLAST)
0001: MQPSDVSATV AEKKEKEKKR PSVSVFKLFS FADFYDCVLM TLGSIGACIH GASVPVFFIF FGKLINIIGL AYLFPQEASH KVAKYSLDFV YLSVAILFSS
0101: WLEVACWMHT GERQAAKIRK AYLRSMLSQD ISLFDTESST GEVISAITSD ILVVQDALSE KVGNFLHCMS RFIAGFAIGF ASVWQISLVT LSIVPLIAVA
0201: GGIYAYVSTG LLASVRKSYV KAGEIAEEVI GNVRTVQAFT GEEKAVRSYG EALENTYTYG RKAGLAKGLG LGSMHCVLFL SWALLVWFAS IIVHKGIANG
0301: GESFTTMLNV VIAGLSLGQA APDISTFVRA RAAAYPIFQM IERNKEVKTG RKLGKVDGEI CFRDVTFTYP SRPDVVIFDK LNLVIPAGKV VALVGGSGSG
0401: KSTVISLIER FYKPTDGAVF LDGNDIRYLD LKWLRGHIGL VNQEPALFAT TIRENIMYGK DDATDEEITR AVTLSEAVSF INKLPDGFET QVGERGVQLS
0501: GGQKQRITIS RAILKNPSIL LLDEATSALD AESEKTVQKA LDKVMVGRTT VVVAHRLSTV RNADIIAVVH GGNIIESGSH DELISNPDGA YSSLLRIQEA
0601: ANPNVNHTPS LSVSTEPLPE RPITKTDLCS MDQSGNPPDT TRQGKVTLGR LYSMIRPDWK YGLFGLFGSL VAGSQMPLFA LGISQALVSY YMDWETTQKE
0701: VKRISILFCC ASVITVISHA IEHTTFGIMG ERLTLRVRQM MFSAILRNEI GWFDKVDNTS SMLASQLESD STLLRTIVVD RSTILLENFG LVVTSFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKLFMQG YGVNLNKAYL KANMLAGEAI SNIRTVAAFC AEDKVLELYS NELLEPSECS FRRGQTAGIL YGVSQFFIFS
0901: SYGLALWYGS VLMGQGLSSF ESVMKTFMVL IVTALVMGEV LALAPDILKG NQMVASVFEL LDRRSQVVGD KGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: RDFDLTVPYG KSMALVGQSG SGKSSVLSLI LRFYDPTAGI IMIDGQDIKK LKLKSLRRHV GLVQQEPALF ATTIYENILY GKEGALESEV MEAAKLANAH
1101: DFICSLPGGY STQVGERGIQ LSGGQRQRIA IARAVLKNPA ILLLDEATSA LDVESERVVQ QALDRLMSNR TTVVVAHRLS TIKNSDMISV IQEGKIIEQG
1201: SHNSLIENEN GPYSRLINLQ QQQLS
Best Arabidopsis Sequence Match ( AT1G10680.1 )
(BLAST)
0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
Arabidopsis Description
ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.