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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030503.1-P Field mustard cytosol, peroxisome, plasma membrane 99.18 95.14
CDY51307 Canola cytosol, peroxisome, plasma membrane 97.79 94.7
AT1G02520.1 Thale cress cytosol, peroxisome, plasma membrane 92.24 88.34
CDX89963 Canola cytosol, nucleus, plasma membrane 90.44 87.58
CDY15249 Canola cytosol, peroxisome, plasma membrane 90.36 87.09
CDY24379 Canola plasma membrane 71.49 74.85
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 71.08 74.23
Os05t0137200-01 Rice plasma membrane 23.61 73.54
CDY58790 Canola peroxisome 73.2 72.79
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 65.11 72.06
CDY51560 Canola peroxisome 73.37 71.78
CDY27510 Canola cytosol 70.02 71.48
CDY25095 Canola cytosol 70.18 71.23
CDY37776 Canola cytosol, peroxisome, plasma membrane 72.3 71.2
CDX67881 Canola cytosol 69.77 71.11
CDX80072 Canola cytosol 69.2 70.7
CDY48003 Canola cytosol 68.71 70.55
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 74.51 70.32
KRH69152 Soybean cytosol, peroxisome, plasma membrane 73.37 70.05
KRH33644 Soybean cytosol, peroxisome, plasma membrane 72.88 69.58
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 72.96 69.39
KRH68334 Soybean cytosol, peroxisome, plasma membrane 71.32 68.04
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 70.42 66.87
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 65.69 66.34
GSMUA_Achr1P25070_001 Banana plasma membrane 48.61 65.67
KXG32330 Sorghum plastid 67.57 64.61
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 67.32 64.48
OQU77362 Sorghum mitochondrion, plasma membrane 60.7 64.38
Solyc06g009290.2.1 Tomato nucleus 72.88 63.71
TraesCS1A01G081300.1 Wheat unclear 64.62 61.99
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 64.62 61.99
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 64.54 61.96
CDY35168 Canola golgi, peroxisome, plasma membrane 55.15 61.87
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 67.16 61.57
HORVU1Hr1G017460.3 Barley plasma membrane 64.46 61.5
CDX86437 Canola cytosol 7.27 59.73
CDX84897 Canola cytosol 5.72 59.32
GSMUA_Achr9P16700_001 Banana plasma membrane 60.13 57.95
CDX86442 Canola cytosol, mitochondrion, plastid 3.02 54.41
CDY00109 Canola plasma membrane 44.61 43.86
CDX86408 Canola plasma membrane 44.04 43.57
CDX93393 Canola plasma membrane 43.46 43.43
CDY20012 Canola plasma membrane 44.44 43.42
CDY65012 Canola plasma membrane 44.44 43.42
CDY37953 Canola plasma membrane 43.38 43.35
CDX94395 Canola plasma membrane 43.55 43.19
CDX92739 Canola plasma membrane 43.46 42.87
CDY27639 Canola plasma membrane 41.67 41.87
CDX89380 Canola plasma membrane 43.55 41.8
CDX86445 Canola plasma membrane 41.67 41.0
CDY42770 Canola golgi, plasma membrane, vacuole 37.66 40.62
CDY04018 Canola plasma membrane 40.69 40.13
CDX85192 Canola plasma membrane 41.59 40.11
CDY46744 Canola cytosol, peroxisome, plasma membrane 43.06 39.39
CDX79704 Canola plasma membrane 43.14 39.37
CDX84896 Canola plasma membrane 32.68 38.06
CDY64952 Canola peroxisome, plasma membrane, vacuole 27.78 34.52
CDY24958 Canola mitochondrion, plasma membrane, plastid 38.24 33.55
CDY07647 Canola cytosol 38.32 33.48
CDY20443 Canola cytosol, mitochondrion, plasma membrane 38.07 33.26
CDY65312 Canola cytosol 37.91 33.17
CDY53591 Canola cytosol, mitochondrion, plasma membrane 37.99 33.03
CDX76106 Canola cytosol, golgi, peroxisome 37.66 32.93
CDY21871 Canola endoplasmic reticulum, plasma membrane 1.55 26.39
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078FRE2UniProt:A0A078FRE2InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY15432ProteinID:CDY15432
ProteinID:CDY15432.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00089598001InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0004EE288ASEG:seg::
Description
BnaA08g27160DBnaA08g27160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRE2]
Coordinates
chrLK032055:+:15737..20379
Molecular Weight (calculated)
132220.0 Da
IEP (calculated)
7.974
GRAVY (calculated)
0.106
Length
1224 amino acids
Sequence
(BLAST)
0001: MNRDGAGEGD SVSHEPSTSK TPREGGEEET KKDEKAKTVP FYKLFAFADS YDVLLMICGS VGAMGNGVGL PLMTLLFGDL IDSFGQNQNN KDIVDVISKV
0101: CVKFVYLGIG TLGAAFLQVA CWMITGERQA AKIRNMYLKT ILRQDIGFFD VETNTGEVVG RMSGDTVLIQ DAMGEKVGKF IQLIATFIGG FALAFAKGWL
0201: LTLVMLTSIP LLAMAGAAMA IIVTRASSQG QAAYAKAATV VEQTIGSIRT VASFTGEKEA INKYKKFITS AYKSSIQQGF STGLGLGIML FVLFSSYALA
0301: IWFGGKMILE KGYTGGAVIN VLIIVVAGAM SLGQTSPCVT AFSAGQSAAY KMFETIERKP LIDAYDLKGK IHEDIRGDIE LKDVHFSYPA RPDEDIFDGF
0401: SLFIPSGATA ALVGESGSGK STVISLIERF YDPKAGQVLI DGVNLKEFQL KWIRSKIGLV SQEPVLFSSS IMENIAYGKE NATIQEIKAA TELANAAKFI
0501: DKLPQGLDTM VGEHGTQLSG GQKQRIAIAR AILKDPRILL LDEATSALDA ESERVVQEAL DRVMVNRTTV IVAHRLSTVR NADMIAVIHR GKMVEKGSHS
0601: ELLRDPEGAY SQLIRLQEIN KDAKTSDAAS GSSFRNSSLK KSIEGSSSSV GNSSRHHSLN VVASGLEQDK TGTEAQEPVP KVSLTRIAAL NKPEIPVLLL
0701: GTVAAAINGA IFPLFGILIS RVIEAFFKPA HELRRDSKFW ALIFVALGVV SFIVSPTQMY LFAVAGGKLI RRIRSMCFEK AVHMEVGWFD EPQNSSGTLV
0801: MLPLIGINGY IQVKFMKGFT ADAKSKYEDA SQVANDAVGS IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY AASFYAGARL
0901: VEAGRTTFND VFQVFFALTM AAIGISQSSS FAPDSSKAKV AAASIFGIID RKSKIDSSDE TGTVLENVKG DIELRHISFT YPARPDIQIF RDLCLTIRAG
1001: KRNVVTQTVA LVGESGSGKS TVISLLQRFY DPDSGHITLD GIELKKMQLK WLRQQMGLVG QEPVLFNDTI RANIAYGKGS EEAATESEII AAAELANAHK
1101: FISSIQQGYD TVVGERGIQL SGGQKQRVAI ARAIVKEPKI LLLDEATSAL DAESERVVQD ALDRVMVNRT TVVVAHRLST IKNADVIAVV KNGVIAEKGT
1201: HETLIKIDGG VYASLVQLHM TASN
Best Arabidopsis Sequence Match ( AT1G02520.3 )
(BLAST)
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.