Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 99.64 | 99.5 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 98.79 | 99.21 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 95.86 | 95.38 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 95.36 | 95.36 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 94.58 | 94.17 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 89.22 | 89.29 |
| CDY65312 | Canola | cytosol | 88.87 | 88.99 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 6.85 | 86.49 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 78.44 | 84.54 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 77.23 | 84.2 |
| KRH70512 | Soybean | extracellular | 84.23 | 84.17 |
| KRH01590 | Soybean | mitochondrion | 84.23 | 84.17 |
| KRG92957 | Soybean | nucleus | 83.87 | 83.99 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 83.65 | 83.77 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 74.59 | 83.47 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 78.3 | 78.3 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 78.16 | 78.16 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 78.3 | 77.97 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 78.02 | 77.52 |
| Os03t0280000-01 | Rice | plasma membrane | 77.59 | 77.04 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 77.23 | 77.01 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 76.66 | 76.77 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 76.94 | 76.51 |
| EER92449 | Sorghum | plasma membrane | 77.16 | 76.5 |
| Zm00001d047780_P002 | Maize | plasma membrane | 77.16 | 76.5 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 76.87 | 76.44 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 76.73 | 76.3 |
| CDX84897 | Canola | cytosol | 4.07 | 48.31 |
| CDX86437 | Canola | cytosol | 4.85 | 45.64 |
| CDY00109 | Canola | plasma membrane | 37.05 | 41.69 |
| CDX93393 | Canola | plasma membrane | 36.4 | 41.63 |
| CDX86408 | Canola | plasma membrane | 36.62 | 41.47 |
| CDY37953 | Canola | plasma membrane | 36.19 | 41.39 |
| CDY20012 | Canola | plasma membrane | 36.97 | 41.34 |
| CDY27639 | Canola | plasma membrane | 35.9 | 41.3 |
| CDX92739 | Canola | plasma membrane | 36.47 | 41.18 |
| CDX94395 | Canola | plasma membrane | 36.26 | 41.17 |
| CDY65012 | Canola | plasma membrane | 36.62 | 40.94 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 32.91 | 40.62 |
| CDX89380 | Canola | plasma membrane | 36.26 | 39.84 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 37.76 | 39.54 |
| CDX79704 | Canola | plasma membrane | 37.83 | 39.52 |
| CDY27510 | Canola | cytosol | 33.48 | 39.12 |
| CDY25095 | Canola | cytosol | 33.62 | 39.05 |
| CDX67881 | Canola | cytosol | 33.48 | 39.05 |
| CDX80072 | Canola | cytosol | 33.33 | 38.98 |
| CDY48003 | Canola | cytosol | 33.05 | 38.84 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 34.12 | 38.46 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 34.69 | 38.45 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 29.91 | 38.41 |
| CDX84896 | Canola | plasma membrane | 28.77 | 38.34 |
| CDY15432 | Canola | cytosol | 33.48 | 38.32 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 34.33 | 38.05 |
| CDY58790 | Canola | peroxisome | 33.4 | 38.02 |
| CDX86445 | Canola | plasma membrane | 33.69 | 37.94 |
| CDY24379 | Canola | plasma membrane | 31.62 | 37.9 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 34.33 | 37.87 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 31.48 | 37.63 |
| CDY51560 | Canola | peroxisome | 33.48 | 37.49 |
| CDY04018 | Canola | plasma membrane | 33.19 | 37.47 |
| CDX85192 | Canola | plasma membrane | 33.33 | 36.8 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 1.78 | 36.76 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 23.13 | 32.89 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.57 | 30.56 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078F3I4 | UniProt:A0A078F3I4 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | EnsemblPlants:CDY07647 | ProteinID:CDY07647 | ProteinID:CDY07647.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00124756001 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0004EEE946 | SEG:seg | : | : | : |
Description
BnaA03g18640DBnaA03g18640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3I4]
Coordinates
chrLK031980:+:291579..297701
Molecular Weight (calculated)
154734.0 Da
IEP (calculated)
6.214
GRAVY (calculated)
0.071
Length
1401 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVSRGLFGWS PPHIQPLTPV SEVSEPPESP SPYLDPSAEN GGGGAGMATQ AEEDEEMDEP EEMEPPPAAV PFSQLFACAD RFDWVLMVLG SVAAAAHGAA
0101: LIVYLHYFAK IVQVLAYGTG SGRRGAEDQF DRLVELSLTI VYIAGGVFIS GWIEVSCWIL TGERQTAVIR SKYVQVLLNQ DMSFFDTYGN NGDIVSQVLS
0201: DVLLIQSALS EKVGNYIHNM ATFISGLVIG FVNCWEIALI TLATGPFIVA AGGVSNIFLH RLAENIQDAY AEAASIAEQA VSYIRTLYAF TNETLAKYSY
0301: ATSLQATLRY GILISLVQGL GLGFTYGLAI CSCALQLWVG RFFVIHGRAN GGEIITALFA VILSGLGLNQ AATNFYSFDQ GRIAAYRLFE MISRSSSGTN
0401: QEGTILSAVE GNIEFRNVYF SYLSRPEIPI LSGFYLTVPA KKAVALVGRN GSGKSSIIPL MERFYDPTLG EVLLDGENVK NLKLEWLRSQ IGLVTQEPAL
0501: LSLSIRENIA YGRDATLDQI EEAAKKARAH TFISSLEKGY ETQVGKAGLT LTEEQKIKLS IARAVLLDPK ILLLDEVTGG LDFEAERVVQ EALDLLMLGR
0601: STIIIARRLS LIRNADYIAV MEEGQLLEMG THDELINLGN LYAELLKCEE ATKLPRRMPV RNYNDPAVFQ AERDSSAGRG FQEHSSPKMA KSPSLQRGHN
0701: VFRPQEMCFN SEESHNDHSP APDKVGENGS SLDVAEKEPT IKRQDSFEMR LPELPKIDIQ CPQRQKSNGS DPESPISPLL ISDPQNERSH SQTFSRPLGH
0801: SDDTKTNVKV ESPSFWKLAQ LSFPEWLYAV LGSIGAAIFG SFNPLLAYVI ALVVTAYYNS KGSHLREEVD KWCLIIAGMG LVTVFANFLQ HFYFGIMGEK
0901: MTERVRRMMF SAMLRNEVGW YDEEENSPDT LSMRLANDAT FVRAAFSNRL SILIQDSFAV IVAILIGLLL GWRLALVALA TLPILTLSAI AQKLWLAGFS
1001: KGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKVMELYRLQ LQRILRQSFL HGMAIGLAFG FSQFLLFACN ALLLWFTAFS VKRGYMKLST ALTEYMVFSF
1101: ATFALVEPFG LAPYILKRRR SLASVFEIID RVPTIEPDDT SALSPPNVYG SIELKNIDFC YPTRPEVLVL SNFSLKVSGG QTLAVVGVSG SGKSTIISLI
1201: ERYYDPVAGQ VLLDGRDLKS YNLRWLRSHM GLIQQEPIIF STTIRENIIY ARHNASEAEM KEAARIANAH HFISSLAHGY DTHIGMRGVE LTQGQKQRIA
1301: IARVVLKNAP ILLIDEASSS IESESSRVVQ EALDTLIMGN KTTILIAHRA AMMRHVDNIV VLNGGKIVEQ GTHDTLSSKN GLYVRLMQPH YGKGLRQHRL
1401: I
0101: LIVYLHYFAK IVQVLAYGTG SGRRGAEDQF DRLVELSLTI VYIAGGVFIS GWIEVSCWIL TGERQTAVIR SKYVQVLLNQ DMSFFDTYGN NGDIVSQVLS
0201: DVLLIQSALS EKVGNYIHNM ATFISGLVIG FVNCWEIALI TLATGPFIVA AGGVSNIFLH RLAENIQDAY AEAASIAEQA VSYIRTLYAF TNETLAKYSY
0301: ATSLQATLRY GILISLVQGL GLGFTYGLAI CSCALQLWVG RFFVIHGRAN GGEIITALFA VILSGLGLNQ AATNFYSFDQ GRIAAYRLFE MISRSSSGTN
0401: QEGTILSAVE GNIEFRNVYF SYLSRPEIPI LSGFYLTVPA KKAVALVGRN GSGKSSIIPL MERFYDPTLG EVLLDGENVK NLKLEWLRSQ IGLVTQEPAL
0501: LSLSIRENIA YGRDATLDQI EEAAKKARAH TFISSLEKGY ETQVGKAGLT LTEEQKIKLS IARAVLLDPK ILLLDEVTGG LDFEAERVVQ EALDLLMLGR
0601: STIIIARRLS LIRNADYIAV MEEGQLLEMG THDELINLGN LYAELLKCEE ATKLPRRMPV RNYNDPAVFQ AERDSSAGRG FQEHSSPKMA KSPSLQRGHN
0701: VFRPQEMCFN SEESHNDHSP APDKVGENGS SLDVAEKEPT IKRQDSFEMR LPELPKIDIQ CPQRQKSNGS DPESPISPLL ISDPQNERSH SQTFSRPLGH
0801: SDDTKTNVKV ESPSFWKLAQ LSFPEWLYAV LGSIGAAIFG SFNPLLAYVI ALVVTAYYNS KGSHLREEVD KWCLIIAGMG LVTVFANFLQ HFYFGIMGEK
0901: MTERVRRMMF SAMLRNEVGW YDEEENSPDT LSMRLANDAT FVRAAFSNRL SILIQDSFAV IVAILIGLLL GWRLALVALA TLPILTLSAI AQKLWLAGFS
1001: KGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKVMELYRLQ LQRILRQSFL HGMAIGLAFG FSQFLLFACN ALLLWFTAFS VKRGYMKLST ALTEYMVFSF
1101: ATFALVEPFG LAPYILKRRR SLASVFEIID RVPTIEPDDT SALSPPNVYG SIELKNIDFC YPTRPEVLVL SNFSLKVSGG QTLAVVGVSG SGKSTIISLI
1201: ERYYDPVAGQ VLLDGRDLKS YNLRWLRSHM GLIQQEPIIF STTIRENIIY ARHNASEAEM KEAARIANAH HFISSLAHGY DTHIGMRGVE LTQGQKQRIA
1301: IARVVLKNAP ILLIDEASSS IESESSRVVQ EALDTLIMGN KTTILIAHRA AMMRHVDNIV VLNGGKIVEQ GTHDTLSSKN GLYVRLMQPH YGKGLRQHRL
1401: I
0001: MMISRGLFGW SPPHIQPLTP VSEVSEPPES PSPYLDPGAE HGGTGTAAQA DDEEEMEEPE EMEPPPAAVP FSQLFACADR FDWVLMVFGS VAAAAHGTAL
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
Arabidopsis Description
ABCB6ABC transporter B family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPT1]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.