Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 87.54 | 78.23 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 81.15 | 78.15 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 87.38 | 78.09 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 87.46 | 77.83 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 87.14 | 77.38 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 79.07 | 77.04 |
| KRH70512 | Soybean | extracellular | 86.26 | 77.03 |
| KRH01590 | Soybean | mitochondrion | 85.94 | 76.75 |
| KRG92957 | Soybean | nucleus | 85.7 | 76.7 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 85.7 | 76.37 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 85.3 | 76.34 |
| Os03t0280000-01 | Rice | plasma membrane | 85.62 | 75.97 |
| EER92449 | Sorghum | plasma membrane | 85.46 | 75.73 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 85.14 | 75.66 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 84.82 | 75.59 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 85.06 | 75.59 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 84.42 | 75.55 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 84.9 | 75.44 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 84.82 | 75.37 |
| Zm00001d047780_P002 | Maize | plasma membrane | 84.82 | 75.16 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 83.47 | 74.91 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 83.71 | 74.8 |
| CDY07647 | Canola | cytosol | 83.47 | 74.59 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 83.71 | 74.43 |
| Bra005036.1-P | Field mustard | mitochondrion | 83.63 | 74.36 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 83.63 | 74.36 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 83.31 | 74.34 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 83.39 | 74.2 |
| CDY65312 | Canola | cytosol | 82.51 | 73.84 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 82.51 | 73.79 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 82.43 | 73.71 |
| HORVU3Hr1G117180.10 | Barley | plastid | 79.63 | 69.96 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 37.7 | 41.88 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 35.62 | 38.99 |
| GSMUA_Achr8P29860_001 | Banana | endoplasmic reticulum | 34.42 | 38.97 |
| GSMUA_Achr1P25070_001 | Banana | plasma membrane | 26.84 | 37.09 |
| GSMUA_Achr4P04430_001 | Banana | cytosol, peroxisome, plasma membrane | 39.38 | 36.38 |
| GSMUA_Achr4P12130_001 | Banana | cytosol | 38.66 | 35.93 |
| GSMUA_Achr9P16700_001 | Banana | plasma membrane | 35.38 | 34.88 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 25.96 | 33.33 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 19.89 | 22.53 |
| GSMUA_Achr1P18340_001 | Banana | plasma membrane | 31.63 | 18.93 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr3G17720_001 |
| EnsemblPlants:GSMUA_Achr3P17720_001 | EnsemblPlants:GSMUA_Achr3T17720_001 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M0SFI8 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24222 |
| PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI000294A039 |
| SEG:seg | : | : | : | : | : |
Description
ABC transporter B family member 20 [Source:GMGC_GENE;Acc:GSMUA_Achr3G17720_001]
Coordinates
chr3:-:19248099..19257013
Molecular Weight (calculated)
138271.0 Da
IEP (calculated)
6.407
GRAVY (calculated)
0.181
Length
1252 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMVSRGLFGW SPPHVQPLTP VSEVSEPPES PSPYMDNGAD TVPVEDDGAV DEVEEIEPPP ATVPFSRLFA CADGVDWALM AVGAVAAAAH GMALVIYLHF
0101: FGRAINLLNS QSDNSEMHAN GDLLFRKFKD HALYIIYIAV GVFVAGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFFG GLIIGLINCW QIALLTLATG PFIVAAGGIS NIFLHRLAEN IQDAYAEAAS IAEQAISYIR TLYAFTNETL AKYSYATSLQ
0301: ATLRYGILIS LVQGLGLGFT YGLAICSCAL QLWVGRFLIS HGKANGGEIV TALFAVILSG LGLNQAATNF YSFEQGRIAA YRLYEMISRS NSTVNQDGNT
0401: LDSVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPARKTVA LVGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKHLKLE WLRSQIGLVT QEPALLSLSI
0501: RDNIAYGRSA TSDQIEEAAK TAHAHTFISS LEMGYETQVG WAGLALTEEQ KIKISIARAV LSNPSILLLD EVTGGLDFEA ERAVQEALDI LMLGRSTIII
0601: ARRLSLIRNA DYIAVMEEGQ LVEMGTHDEL LNLDGLYAEL LRCEEAAKLP KRMPIRNYKD PSSFQIEKDS SGSQSLQEPS SPKMSKSPSL QRAHDPESPI
0701: SPLLTSDPKN ERSHSKTFSR PLNQFDHWLY ALLGSTGAAI FGSFNPLLAY TIAFIVAAYY RIDVRDIHNE VNKWCLIIAC MGIITVVANF LQHFYFGIMG
0801: EKMTERVRRM MFSAMLRNEV GWFDEEENSA DTLSMRLAND ATFVRAAFSN RLSIFIQDTS AVVVAILIGM LLEWRVALVA LATLPILTVS AVAQKMWLAG
0901: FSRGIQEMHR KASLVLEDAV RNIYTVVAFC AGNKIMELYR LQLSRILKQS FIHGMAIGFA FGFSQFLLFA CNSLLLWYTA FSVDKGYLTI ATALKEYIVF
1001: SFATFALVEP FGLAPYILKR QKSLTSVFEI IDRLKNVDFC YPTRPEVMVL SNFSLKVSGG QTVAVVGVSG SGKSTIISLI ERFYDPEPVI FSTTIRENII
1101: YARHNATEAE MKEAARIANA HHFISSLPHG YDTHVGMRGV DLTPGQKQRI AIARVVLKNA PILLLDEASS AIESESSRVV QEALGTLIMG NKTTILIAHR
1201: AAMMRHVDNI VVLNGGRIVE HGTHESLVQT NGLYVRLMQP HFSKGLRQHR LV
0101: FGRAINLLNS QSDNSEMHAN GDLLFRKFKD HALYIIYIAV GVFVAGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFFG GLIIGLINCW QIALLTLATG PFIVAAGGIS NIFLHRLAEN IQDAYAEAAS IAEQAISYIR TLYAFTNETL AKYSYATSLQ
0301: ATLRYGILIS LVQGLGLGFT YGLAICSCAL QLWVGRFLIS HGKANGGEIV TALFAVILSG LGLNQAATNF YSFEQGRIAA YRLYEMISRS NSTVNQDGNT
0401: LDSVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPARKTVA LVGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKHLKLE WLRSQIGLVT QEPALLSLSI
0501: RDNIAYGRSA TSDQIEEAAK TAHAHTFISS LEMGYETQVG WAGLALTEEQ KIKISIARAV LSNPSILLLD EVTGGLDFEA ERAVQEALDI LMLGRSTIII
0601: ARRLSLIRNA DYIAVMEEGQ LVEMGTHDEL LNLDGLYAEL LRCEEAAKLP KRMPIRNYKD PSSFQIEKDS SGSQSLQEPS SPKMSKSPSL QRAHDPESPI
0701: SPLLTSDPKN ERSHSKTFSR PLNQFDHWLY ALLGSTGAAI FGSFNPLLAY TIAFIVAAYY RIDVRDIHNE VNKWCLIIAC MGIITVVANF LQHFYFGIMG
0801: EKMTERVRRM MFSAMLRNEV GWFDEEENSA DTLSMRLAND ATFVRAAFSN RLSIFIQDTS AVVVAILIGM LLEWRVALVA LATLPILTVS AVAQKMWLAG
0901: FSRGIQEMHR KASLVLEDAV RNIYTVVAFC AGNKIMELYR LQLSRILKQS FIHGMAIGFA FGFSQFLLFA CNSLLLWYTA FSVDKGYLTI ATALKEYIVF
1001: SFATFALVEP FGLAPYILKR QKSLTSVFEI IDRLKNVDFC YPTRPEVMVL SNFSLKVSGG QTVAVVGVSG SGKSTIISLI ERFYDPEPVI FSTTIRENII
1101: YARHNATEAE MKEAARIANA HHFISSLPHG YDTHVGMRGV DLTPGQKQRI AIARVVLKNA PILLLDEASS AIESESSRVV QEALGTLIMG NKTTILIAHR
1201: AAMMRHVDNI VVLNGGRIVE HGTHESLVQT NGLYVRLMQP HFSKGLRQHR LV
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.