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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • plasma membrane 1
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:mitochondrion
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
 extracellular: 25724908
msms PMID: 25724908 doi
VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH01590 Soybean mitochondrion 97.65 97.65
KRG92957 Soybean nucleus 90.3 90.49
KRH36206 Soybean cytosol, golgi, plastid 90.23 90.42
VIT_13s0019g00310.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 81.46 87.85
Solyc04g010310.2.1 Tomato plasma membrane 79.81 87.08
GSMUA_Achr3P17720_001 Banana peroxisome 77.03 86.26
HORVU3Hr1G117250.1 Barley mitochondrion 6.78 85.59
CDY24958 Canola mitochondrion, plasma membrane, plastid 84.66 85.09
AT3G55320.1 Thale cress cytosol, peroxisome, plasma membrane 85.02 84.66
CDY20443 Canola cytosol, mitochondrion, plasma membrane 84.59 84.65
CDX76106 Canola cytosol, golgi, peroxisome 84.52 84.64
Bra014756.1-P Field mustard cytosol, golgi, peroxisome 84.38 84.5
CDY65312 Canola cytosol 84.31 84.49
CDY53591 Canola cytosol, mitochondrion, plasma membrane 84.74 84.38
Bra005036.1-P Field mustard mitochondrion 84.66 84.3
CDY07647 Canola cytosol 84.17 84.23
AT2G39480.1 Thale cress cytosol, mitochondrion, plasma membrane 84.52 84.22
Bra000136.1-P Field mustard cytosol, mitochondrion, peroxisome 84.24 84.18
KXG34231 Sorghum cytosol, plasma membrane, vacuole 80.53 80.59
TraesCS3A01G536300.1 Wheat cytosol, plasma membrane, vacuole 80.31 80.37
TraesCS3D01G541700.1 Wheat cytosol, plasma membrane, vacuole 80.31 80.03
TraesCS3B01G607600.1 Wheat cytosol, plasma membrane, vacuole 80.03 79.57
Zm00001d041947_P001 Maize cytosol, peroxisome, plasma membrane 79.32 79.15
Os03t0280000-01 Rice plasma membrane 79.32 78.81
EER92449 Sorghum plasma membrane 79.1 78.49
Zm00001d028671_P002 Maize cytosol, plasma membrane, vacuole 78.25 78.41
Zm00001d047780_P002 Maize plasma membrane 78.67 78.06
TraesCS4A01G101600.3 Wheat cytosol, plasma membrane, plastid 78.39 78.0
TraesCS4B01G203000.1 Wheat cytosol, plasma membrane, plastid 78.32 77.93
TraesCS4D01G203900.2 Wheat cytosol, plasma membrane, plastid 78.1 77.71
KRH18485 Soybean endoplasmic reticulum, mitochondrion 37.66 42.27
KRG93519 Soybean cytosol, peroxisome, plasma membrane 37.59 42.16
KRH05968 Soybean plasma membrane 37.38 41.92
KRH17450 Soybean plasma membrane 37.3 41.84
KRH45417 Soybean plasma membrane 37.09 41.47
KRH39563 Soybean peroxisome 36.16 40.72
KRH74394 Soybean plasma membrane 35.95 40.45
KRH67730 Soybean cytosol, peroxisome, plasma membrane 38.59 40.31
KRG96023 Soybean cytosol, peroxisome, plasma membrane 38.3 40.1
KRH21125 Soybean plasma membrane 35.95 39.97
KRH19897 Soybean cytosol, peroxisome, plasma membrane 38.09 39.82
KRH32507 Soybean cytosol, nucleus, plasma membrane 38.09 39.76
KRH11119 Soybean plasma membrane 35.24 39.62
KRH69152 Soybean cytosol, peroxisome, plasma membrane 35.95 39.31
KRH19486 Soybean cytosol, peroxisome, plasma membrane 35.24 38.78
KRH33644 Soybean cytosol, peroxisome, plasma membrane 35.31 38.61
KRH02481 Soybean plasma membrane 34.38 37.8
KRH02484 Soybean plasma membrane 33.95 37.6
KRH68334 Soybean cytosol, peroxisome, plasma membrane 33.95 37.1
KRH19480 Soybean plasma membrane 31.67 36.82
KRH19479 Soybean plasma membrane 33.95 36.64
KRH02482 Soybean cytosol, peroxisome, plasma membrane 33.88 36.45
KRH53669 Soybean plasma membrane 31.74 35.49
KRH06234 Soybean peroxisome, plastid 32.74 30.3
Protein Annotations
Gene3D:1.20.1560.10EntrezGene:100789116MapMan:24.1.3.1.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeEMBL:ACUP02000780ncoils:CoilEnsemblPlantsGene:GLYMA_02G094800GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085UniProt:I1JDS0InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640
EnsemblPlants:KRH70512ProteinID:KRH70512ProteinID:KRH70512.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24222PANTHER:PTHR24222:SF21SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0002337539SEG:seg::
Description
hypothetical protein
Coordinates
chr2:-:8502025..8511131
Molecular Weight (calculated)
155277.0 Da
IEP (calculated)
6.582
GRAVY (calculated)
0.090
Length
1402 amino acids
Sequence
(BLAST)
0001: MMVSRGLFGW SPPHVQPLTP VSEVSEPPES PSPYLDPSAE TSASQQLEAE EEMEEPEEIE PPPAAVPFSQ LFACADRFDW FLMAVGSVAA AAHGTALVLY
0101: LHYFAKIIHV LRLDPPHGTS QEQFDRFTEL ALTIVYIAAG VFVAGWIEVS CWILTGERQT AVIRSKYVQV LLNQDMSFFD TYGNNGDIVS QVLSDVLLIQ
0201: SALSEKVGNY IHNMATFFSG LVIGLVNCWQ IALITLATGP FIVAAGGISN IFLHRLAENI QDAYAEAASI AEQAVSYIRT LYAFSNETLA KYSYATSLQA
0301: TLRYGILISL VQGLGLGFTY GLAICSCALQ LWVGRFLVIH GKAHGGEIIT ALFAVILSGL GLNQAATNFY SFDQGRIAAY RLFEMISRSS SSVNHDGTSP
0401: DSVQGNIEFR NVYFSYLSRP EIPILSGFYL TVPAKKAVAL VGRNGSGKSS IIPLMERFYD PTLGEVLLDG ENIKNLKLEW LRSQIGLVTQ EPALLSLSIR
0501: DNIAYGRDAT MDQIEEAAKI AHAHTFISSL EKGYDTQVGR AGLSLTEEQK IKLSIARAVL LNPSILLLDE VTGGLDFEAE RAVQGALDLL MLGRSTIIIA
0601: RRLSLIKNAD YIAVMEEGQL VEMGTHDELL ALDGLYAELL RCEEAAKLPK RMPVRNYKET SAFQIEKDSS SHSFKEPSSP KMIKSPSLQR VSNASRPPDG
0701: AFNLLESPKV QSPPSEKMLE NGLALDAADK EPSIRRQDSF EMRLPELPKI DVHSVHRHMS NESDPESPIS PLLTSDPKSE RSHSQTFSRP LSHSDDVSVK
0801: MRETKGARHR KPPSLQKLAE LSFTEWLYAV LGSIGAAIFG SFNPLLAYVI GLVVTAYYRI DDPHHLEREV DRWCLIIGCM GIVTVVANFL QHFYFGIMGE
0901: KMTERVRRMM FSAMLRNEVG WFDDEENSAD NLSMRLANDA TFVRAAFSNR LSIFIQDSAA VIVGLLIGAL LHWRLALVAF ATFPILCVSA IAQKFWLAGF
1001: SRGIQEMHRK ASLVLEDAVR NIYTVVAFCA GNKVMELYRL QLKKIFKQSF LHGMAIGFAF GFSQFLLFAC NALLLWYTAI CIKRGYMDPP TALKEYMVFS
1101: FATFALVEPF GLAPYILKRR KSLISVFDII DRVPIIDPDD SSALKPPNVY GSLELKNVDF CYPSRPEVLV LSNFSLKVTG GQTVAIVGVS GSGKSTIISL
1201: IERFYDPVAG QVFLDGRDLK QYNLRWLRSH LGLVQQEPII FSTTIRENII YARHNATEAE MKEAARIANA HHFISSLPHG YDTHVGMRGV DLTPGQKQRI
1301: AIARVVLKNA PILLLDEASS AIESESSRVV QEAIDTLIMG NKTTILIAHR AAMMRHVDNI VVLNGGRIVE EGSHDTLVAK NGLYVRLMQP HFGKALRQHR
1401: LV
Best Arabidopsis Sequence Match ( AT3G55320.1 )
(BLAST)
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.