CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19479	Soybean	plasma membrane	88.07	85.84
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	79.38	77.13
PGSC0003DMT400011703	Potato	cytosol	10.11	76.65
KRH19480	Soybean	plasma membrane	70.93	74.46
Os05t0137200-01	Rice	plasma membrane	21.33	68.7
KRH02481	Soybean	plasma membrane	69.04	68.55
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	68.64	68.21
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	59.08	67.63
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	66.67	65.83
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	66.03	65.21
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.19	64.76
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	64.14	63.29
GSMUA_Achr1P25070_001	Banana	plasma membrane	44.79	62.58
OQU77362	Sorghum	mitochondrion, plasma membrane	56.95	62.48
KXG32330	Sorghum	plastid	60.98	60.31
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	60.74	60.17
Solyc12g098840.1.1	Tomato	peroxisome	59.72	59.06
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	58.85	58.43
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	58.85	58.39
TraesCS1A01G081300.1	Wheat	unclear	58.69	58.23
KRH11119	Soybean	plasma membrane	57.19	58.06
HORVU1Hr1G017460.3	Barley	plasma membrane	58.77	57.99
KRH21125	Soybean	plasma membrane	57.74	57.97
PGSC0003DMT400011930	Potato	peroxisome	58.69	57.73
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	60.51	57.38
GSMUA_Achr9P16700_001	Banana	plasma membrane	56.32	56.14
KRH45417	Soybean	plasma membrane	42.34	42.74
KRH39563	Soybean	peroxisome	41.94	42.65
KRH74394	Soybean	plasma membrane	41.71	42.38
KRH18485	Soybean	endoplasmic reticulum, mitochondrion	41.63	42.19
KRG93519	Soybean	cytosol, peroxisome, plasma membrane	41.55	42.08
KRH05968	Soybean	plasma membrane	39.73	40.24
KRH17450	Soybean	plasma membrane	39.34	39.84
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	39.57	37.42
KRH32507	Soybean	cytosol, nucleus, plasma membrane	39.65	37.38
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	39.26	37.06
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	39.1	36.89
KRH53669	Soybean	plasma membrane	35.78	36.12
KRG92957	Soybean	nucleus	37.6	34.02
KRH70512	Soybean	extracellular	37.6	33.95
KRH36206	Soybean	cytosol, golgi, plastid	37.36	33.81
KRH01590	Soybean	mitochondrion	37.44	33.81
KRH06234	Soybean	peroxisome, plastid	36.89	30.83

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100818527	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02010307	EnsemblPlantsGene:GLYMA_17G041400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	UniProt:I1MRZ3	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
EnsemblPlants:KRH02484	ProteinID:KRH02484	ProteinID:KRH02484.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF290	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0002957BDD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:3076764..3083449

Molecular Weight (calculated)

137096.0 Da

IEP (calculated)

6.714

GRAVY (calculated)

0.153

Length

1266 amino acids

Sequence
(BLAST)

0001: MARQQDFKKN KMMKKEESNK TLPFHKLFSF ADSRDYLLMF VGTISAAGNG MTKASTNIVM GEAIEAFRRS GNTKQVVHEV SQVSLKFALL GAISFLAAFL
0101: QVACWVSTGE RQAARIRGLY LKAVLRQDIS YFDKETNTGE VVERMSGDTV LIQEAMGEKV GKFIQCVACF LGGLVIAFIK GWFLTLVLLS CIPPLVLSGS
0201: IMSIAFAKLA SRGQAAYSEA ATVAACAIGS IRTVASFTGE NQAIAQYNQS LTKAYRTAVQ DGVAAGLGLG SIRFFITSSF ALALWFGAKM VLEKGYTPGQ
0301: VMSIFLALFY ASMSLGQVST NLTAFAAGQA AAFKIFETIN RHPDIDAYDT AGQQKDDISG DIELREVCFS YPSRPDALIF NGFSISISSG TNAALVGKSG
0401: SGKSTVISLI ERFYDPQAGE VLIDGINLRE LQLKWIRQKI GLVSQEPVLF HCSIKENIAY GKDGATDEEI RAATELANAA KFIDKFPHGL DTVAGEHGTQ
0501: LSGGQKQRIA IARAILKDPR VLLLDEATSA LDAESERVVQ ETLDKVMINR TTIIVAHRLN TIRNADTISV IHQGRVVENG THAELIKDPD GAYSQLIRLQ
0601: EINKQLDGTD DSGRVENSVD SERQSSQWFP FPQSLSLGSS GTGNSSHDSF RISNAMPTTL DLLKTSEEGP EVLPPVVSHS PPEVSFLHLV YLNKPEIPEL
0701: VLGTLAAIVT GAILPLMGFL ISNMINTFLE PADELRKVSK FWALMFIALG VAGTIFHPIR SYFFAVAGSK LIKRIGLMCF KKIIHMEVGW FDKAGNSSGI
0801: LGARLSLDVA SIRTFVGDAL GLMVQDVATV IIALVIAFEA NWQLSLIILV LLPLLLVNGQ VQMGSMQGFV TDAKKLYEEA SQVANDAVGN IRTIAAFCAE
0901: EKVMNLYQKK CLGPIKTGIW QGIVSGTSFG LSLFLVFSVN SCSFYAGARL VENGKTSISD VFRVFFTLTM AAIAISQSGF MAPGASKAKS SVTSIFAILD
1001: QKSRIDPSDE CGMTLQEVKG EIEFHHVTFK YPTRPNVLLF RDLSLTIHAG ETVALAGESG SGKSTVISLL QRFYEPDSGQ ITLDGTEIQK LQLKWFRQQM
1101: GLVSQEPVLF NDTIRTNIAY GKGGDATEAE IIAATELANA HTFISSLQQG YDTIVGERGI QLSGGQKQRV AIARAIVKNP KILLLDEATS ALDVESERVV
1201: QDALDQVMVD RTTIVVAHRL STIKDADSIA VVQNGVIAEQ GKHDTLLNKG GIYASLVGLH TNLVSS

Best Arabidopsis Sequence Match ( AT1G02520.1 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.