CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02481	Soybean	plasma membrane	92.54	92.47
PGSC0003DMT400011703	Potato	cytosol	10.68	81.44
Os05t0137200-01	Rice	plasma membrane	23.47	76.08
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	65.31	75.23
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	73.78	73.32
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	73.31	72.85
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.55	72.41
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	72.29	70.68
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	71.11	70.62
GSMUA_Achr1P25070_001	Banana	plasma membrane	49.92	70.2
OQU77362	Sorghum	mitochondrion, plasma membrane	63.27	69.84
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	69.07	68.86
KRH02484	Soybean	plasma membrane	68.21	68.64
KXG32330	Sorghum	plastid	68.92	68.59
KRH19480	Soybean	plasma membrane	64.44	68.08
TraesCS1A01G081300.1	Wheat	unclear	66.25	66.14
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	66.17	66.12
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	66.17	66.07
HORVU1Hr1G017460.3	Barley	plasma membrane	66.41	65.94
KRH19479	Soybean	plasma membrane	67.11	65.82
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	68.45	65.32
KRH21125	Soybean	plasma membrane	63.89	64.55
KRH11119	Soybean	plasma membrane	62.32	63.67
Solyc12g098840.1.1	Tomato	peroxisome	63.42	63.12
PGSC0003DMT400011930	Potato	peroxisome	63.27	62.63
GSMUA_Achr9P16700_001	Banana	plasma membrane	60.6	60.79
KRH18485	Soybean	endoplasmic reticulum, mitochondrion	44.19	45.08
KRH39563	Soybean	peroxisome	44.03	45.06
KRG93519	Soybean	cytosol, peroxisome, plasma membrane	44.19	45.04
KRH74394	Soybean	plasma membrane	43.8	44.78
KRH45417	Soybean	plasma membrane	43.72	44.42
KRH32507	Soybean	cytosol, nucleus, plasma membrane	44.27	42.0
KRH05968	Soybean	plasma membrane	41.05	41.84
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	43.96	41.82
KRH17450	Soybean	plasma membrane	40.89	41.68
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	43.8	41.61
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	43.64	41.43
KRH53669	Soybean	plasma membrane	37.21	37.8
KRG92957	Soybean	nucleus	38.93	35.45
KRH36206	Soybean	cytosol, golgi, plastid	38.85	35.38
KRH70512	Soybean	extracellular	38.78	35.24
KRH01590	Soybean	mitochondrion	38.54	35.02
KRH06234	Soybean	peroxisome, plastid	39.95	33.6

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02008180	EnsemblPlantsGene:GLYMA_13G119000	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	UniProt:I1LYF5	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	EnsemblPlants:KRH19486
ProteinID:KRH19486	ProteinID:KRH19486.1	ProteinID:KRH19487.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF290	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI00023CF3C0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:23173905..23180011

Molecular Weight (calculated)

137788.0 Da

IEP (calculated)

6.672

GRAVY (calculated)

0.136

Length

1274 amino acids

Sequence
(BLAST)

0001: MEGDISVNGD PNTYSNSNQD SKKSEAKDEP AKTVPLYRLF SFADPLDHLL MFVGTVGAIG NGISLPLMTL IFGNMINAFG ESSNTNEVVD EVSKVSLKFV
0101: YLAVGTFFAS FLQLTCWMIT GDRQAARIRG LYLQTILRQD VSFFDKETNT GEVVGRMSGD TVLIQDAMGE KVGQFIQLIS TFFGGFVVAF IKGWLLTVVM
0201: LACIPLLVMS GAMITVIISR ASSEGQAAYS TAASVVEQTI GSIRTVASFT GERLAIAKYN QSLNKAYKTG VQEALASGLG FGLLYFVFIC SYGLAVWFGA
0301: KMIIEKGYTG GKVLTVIFAV LTGSMSLGQA SPSLSAFAAG QAAAFKMFET IKRKPEIDAY DTTGRKLEDI RGDIELREVC FSYPTRPDEL IFNGFSLSIP
0401: SGTTAALVGQ SGSGKSTVVS LIERFYDPQS GAVLIDGINL REFQLKWIRQ KIGLVSQEPV LFTCSIKENI AYGKDGATDE EIRAAAELAN AAKFIDKLPQ
0501: GLDTMVGEHG TQLSGGQKQR VAIARAILKD PRILLLDEAT SALDTESERI VQEALDRIMI NRTTVIVAHR LSTIRNADTI AVIHLGKIVE RGSHVELTKD
0601: PDGAYSQLIR LQEIKRLEKN VDVREPESIV HSGRHSSKRS SFLRSISQES LGVGNSGRHS FSASFGVPTS VGFIEPAGEG PQDPPSTAPS PPEVPLYRLA
0701: YLNKPEILVL LMGTVSAVIT GVILPVFGLL LSKMISIFYE PAHELRKDSK VWAIVFVGLG AVSFLVYPGR FYFFGVAGGK LIQRIRKMCF EKVVHMEVSW
0801: FDEAENSSGA IGARLSTDAA SVRALVGDAL GLLVQNTATA IAGLVIAFES SWQLALIILA LVPLLGLNGY LQFKFLKGFS ADTKKLYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMELYQEK CEGPIKTGKR QGIISGISFG VSFFVLYSVY ATSFYAGARL VEDRKATFTD VFRVFFALSM AAIGISQSGS LVPDSTKAKG
1001: AAASIFAILD RKSEIDPSDD TGMTLEEFKG EIELKHVSFK YPTRPDVQIF RDLSLTIHSG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGTEIQR
1101: MQVKWLRQQM GLVSQEPVLF NDTIRANIAY GKADATEAEI ITAAELANAH TFISSLQKGY DTLVGERGVQ LSGGQKQRVA IARAIVKSPK ILLLDEATSA
1201: LDAESEKVVQ DALDRVMVDR TTIVVAHRLS TIKGADLIAV VKNGVIAEKG KHEALLNKGG DYASLVALHT SAST

Best Arabidopsis Sequence Match ( AT1G02520.1 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.