CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058977	Potato	plastid	66.2	65.68
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	67.99	65.31
Bra032855.1-P	Field mustard	cytosol	4.75	61.02
TraesCS4B01G298100.1	Wheat	mitochondrion, plasma membrane	52.08	60.05
Os03t0181750-00	Rice	plasma membrane	37.49	58.86
TraesCS4A01G006900.1	Wheat	peroxisome	55.12	55.85
TraesCS4D01G296900.1	Wheat	peroxisome	55.18	55.73
Zm00001d004442_P001	Maize	plastid	54.85	54.78
KXG25805	Sorghum	peroxisome, plastid	55.18	54.01
HORVU4Hr1G077060.1	Barley	mitochondrion, peroxisome, plastid	48.71	53.06
Os03t0181675-00	Rice	cytosol, nucleus, peroxisome, plastid	17.56	45.63
KRH18485	Soybean	endoplasmic reticulum, mitochondrion	34.32	41.63
KRG93519	Soybean	cytosol, peroxisome, plasma membrane	34.19	41.44
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	33.6	39.95
KRH11119	Soybean	plasma membrane	32.87	39.94
KRH21125	Soybean	plasma membrane	33.14	39.81
KRH39563	Soybean	peroxisome	32.28	39.28
KRH74394	Soybean	plasma membrane	32.28	39.25
KRH45417	Soybean	plasma membrane	32.34	39.08
KRH02481	Soybean	plasma membrane	32.87	39.06
KRH05968	Soybean	plasma membrane	32.15	38.96
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	32.81	38.77
KRH32507	Soybean	cytosol, nucleus, plasma membrane	34.32	38.72
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	32.74	38.69
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	34.19	38.69
KRH17450	Soybean	plasma membrane	31.88	38.64
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	34.19	38.6
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	32.48	38.35
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	33.86	38.26
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	32.87	38.22
KRH19480	Soybean	plasma membrane	30.1	37.81
KRH02484	Soybean	plasma membrane	30.83	36.89
KRH19479	Soybean	plasma membrane	31.35	36.57
KRH53669	Soybean	plasma membrane	29.77	35.96
KRH70512	Soybean	extracellular	30.3	32.74
KRH01590	Soybean	mitochondrion	30.23	32.67
KRG92957	Soybean	nucleus	29.7	32.17
KRH36206	Soybean	cytosol, golgi, plastid	29.57	32.02

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100816700	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02009818	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G011000
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
UniProt:K7MEJ8	EnsemblPlants:KRH06234	ProteinID:KRH06234	ProteinID:KRH06234.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000233B7A9	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:950705..958898

Molecular Weight (calculated)

166541.0 Da

IEP (calculated)

7.893

GRAVY (calculated)

-0.109

Length

1515 amino acids

Sequence
(BLAST)

0001: MAADSFSFEG DSFSSHQRRH YPTPVSYHTV YGSGSGSFIS SSSLTNPRAR RRNPVPATPF ASDDDHSWQG EVSWKFEATG WRDYSTNFGS VLSPWPESSP
0101: SGHSRVFRRS ANDYYLSRTS RFRGLANSSY EQSGYGRVEL QSYDARDNDY SYFDQHSRPQ GLSRSGFIQE KSSKKCKTSP LAEEDELSMI DYSITHDHVI
0201: SPNRNGHGLE LPYSKHGHGG DYGGNYHVGH DGPSSHGSQI YRSGGDYTYS HHDIEKLSAY DEEGEEDMDE EDARPPKTVG IFSLFKYSTK LDLVLVFVGC
0301: LGALINGGSL PWYSYLFGDV VNKISEAEND KAQMMKDVER ICKFMAGLAA VVVFGAYLQI TCWRLVGERA AQRIRTEYLR AVLRQDITFF DTDINTGDIM
0401: HGIASDVAQI QEVMGEKMAH FIHHIFTFIC GYAVGFKRSW KVSLVVFSVT PLTMFCGMAY KALYGGLTAK EEASYRKAGS IAEQAISSIR TVFSFVAESK
0501: LAGKYAELLQ KSAPIGARVG FAKGIGMGVI YLITYSTWAL AFWYGSVLIA RNELDGGSAI ACFFGVNVGG RGLALALSYF AQFGQGTVAA SRVFYIIERI
0601: PEIDSYSPEG RKLSGVRGRI ELKSVSFAYP SRPDSLILHS LNLVLPSSKT VALVGASGGG KSTIFALIER FYDPIEGIIT LDGHDLRTLQ VKWLRDQIGM
0701: VGQEPILFAT SILENVMMGK DNATKKEAIA ACIAADAHSF ISSLPLSYDT QVGDRGTKLS GGQKQRIALA RAMVKDPKIL LLDEPTSALD AESESAVQRA
0801: IDKISASRTT IVIAHRIATV KNAHAIVVLE HGSVTEIGDH RQLMAKAGAY YNLVKLATEA ISKPLAIENE MQKANDLSIY DKPISGLSGS RYLVDDIDIP
0901: WPKGLKSTQE EEEKKHQDME DKQDKMARKY SLSEVWKLQK PEFVMLFSGL ILGMFAGAIL SLFPLVLGIS LGVYFGHDTH KMKRDVGRLC LTLVGLGFGC
1001: ILSMTGQQGL CGWAGSKLTQ RVRDLLFQSI LKQEPGWFDF EENSTGVLVS RLSLDCVSFR SVLGDRFSVL LMGLSSAAVG LGVSFAFNWR LTLVAAAVTP
1101: FALGASYISL IINVGPRVDN DSYAKASNIA SGAVSNIRTV TTFSAQEQIV KSFDRALSEP RRKSLRSSQL QGLMFGLFQG SMYGAYTLTL WFGAYLVEHD
1201: KAKLGDVFKI FLILVLSSFS VGQLAGLAPD TTMAAAAIPA VQDIIKRRPL IDNDRTKGRI VDRSKRFNIE FKMVTFAYPS RPEVTVLRDF CLKVKAGSTV
1301: ALVGPSGSGK STVIWLTQRF YDPDQGKVMM SGIDLREIDV KWLRRQMALV GQEPSLFAGS IRENIAFGDP NASWTEIEEA AKEAYIHKFI SGLPQGYETQ
1401: VGESGVQLSG GQKQRIAIAR AILKKSRVLL LDEASSALDL ESEKHIQEAL KKVTKEATTI IVAHRLSTIR EADKIAVMRD GEVVEYGSHD NLMASNQNGL
1501: YACLVRAETE ANAFA

Best Arabidopsis Sequence Match ( AT1G10680.1 )
(BLAST)

0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP

Arabidopsis Description

ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.