Factsheet for TraesCS4A01G006900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G298100.1	Wheat	mitochondrion, plasma membrane	86.89	98.86
TraesCS4D01G296900.1	Wheat	peroxisome	98.26	97.93
HORVU4Hr1G077060.1	Barley	mitochondrion, peroxisome, plastid	86.42	92.88
Os03t0181750-00	Rice	plasma membrane	52.44	81.24
Zm00001d004442_P001	Maize	plastid	79.53	78.38
KXG25805	Sorghum	peroxisome, plastid	80.33	77.58
Os03t0181675-00	Rice	cytosol, nucleus, peroxisome, plastid	27.16	69.64
Bra032855.1-P	Field mustard	cytosol	4.68	59.32
PGSC0003DMT400058977	Potato	plastid	56.86	55.66
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	58.46	55.42
KRH06234	Soybean	peroxisome, plastid	55.85	55.12
TraesCS7A01G284900.1	Wheat	plasma membrane	34.52	41.41
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	31.3	40.28
TraesCS2A01G344300.1	Wheat	cytosol, peroxisome, plasma membrane	33.98	40.22
TraesCS2A01G521400.2	Wheat	cytosol, peroxisome, plasma membrane	33.78	39.89
TraesCS6A01G264900.3	Wheat	golgi	33.44	39.49
TraesCS4A01G370600.1	Wheat	plasma membrane	32.51	39.45
TraesCS3A01G257500.1	Wheat	plasma membrane	32.58	38.74
TraesCS1A01G081300.1	Wheat	unclear	32.91	38.56
TraesCS3A01G258200.1	Wheat	peroxisome	32.17	38.48
TraesCS3A01G258400.3	Wheat	peroxisome	32.11	38.16
TraesCS2A01G009900.1	Wheat	plasma membrane	31.84	37.84
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	31.91	37.71
TraesCS2A01G009600.1	Wheat	plasma membrane	31.44	37.51
TraesCS2A01G323900.1	Wheat	plasma membrane	31.5	37.2
TraesCS3A01G258000.1	Wheat	mitochondrion	32.71	36.88
TraesCS5A01G495900.1	Wheat	plasma membrane	30.84	36.39
TraesCS3A01G369700.1	Wheat	peroxisome	30.84	36.02
TraesCS7A01G303200.1	Wheat	cytosol	18.26	34.91
TraesCS7A01G303100.1	Wheat	peroxisome	29.23	34.57
TraesCS3A01G536300.1	Wheat	cytosol, plasma membrane, vacuole	28.9	30.84
TraesCS4A01G101600.3	Wheat	cytosol, plasma membrane, plastid	28.96	30.73

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF235	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G006900	EnsemblPlants:TraesCS4A01G006900.1	TIGR:cd03249	SEG:seg

Description

No Description!

Coordinates

chr4A:-:4588851..4594150

Molecular Weight (calculated)

160219.0 Da

IEP (calculated)

9.237

GRAVY (calculated)

0.022

Length

1495 amino acids

Sequence
(BLAST)

0001: MADFSFSRSG PQPQGQARRR QGARSPYPTP DNSTSFAGGR GQRRRGGGGY DDMSWQSSVS WQPDTSWAQP HGLGAAVGPW GLAGSDAASR RGPALFQRTA
0101: RDYYLSRRSG ARTHRDRSSS MSTVHRPSGA VSTVAGKRLE LQSVVTDASR AAAVAPDVSF ASNDDCSIAA SVAPAGAGGA VDRAMVRYGA GAGARTPVSR
0201: EVSFSRDNHN KLYVTPAPVQ RDVPSFGYDV SATSYSQSRS RYYGDDAGGG YEDDDDGEVE LRAGKPVSVT GLFKYSTPMD VVLLVLGCIG AMINGGSLPW
0301: YSYLFGNFVN KIVASDKSQM MNDVRQISVY MVILAVVVVI GAYLEIMCWR IVGERSALRV RREYLKAVLR QEIGFFDTEV STGEVMQSIS SDVAQIQEVM
0401: GEKMAGFVHH VFTFIFGYVV GFRTSWRIAL AVLAVTPVMM ACGIAYKAIY GGLAANEEAS YQPAGSVAQQ AISSIRTVLS FVMEERLADR YAEWLRKASP
0501: IGVKMGFAKG AGMGMIYLVT YSQWALALWY GAKLVAQQEI KGGDAIACFF GVMVGGRGLA LSLSYSAQFA QGTAAAGRVF EIIDREPEID PYGAGGRALS
0601: AVRGRMEFKD VEFAYPSRPE SLILYNLNLI VPAAKMLALV GISGGGKSTV FALIERFYDP TRGTITLDGQ DLGSLNLKWL RSQIGLVGQE PILFAVSIIE
0701: NVMMGKENAT RQEAIAACTK ANAHTFVLGL PDGYDTQVGD RGTQLSGGQK QRIALARAII REPRILLLDE PTSALDAESE AVVQQSIDRL SVGRTVLVIA
0801: HRLATVRNAD TIAVLDRGAV VESGRHADLM ARAGPYAGLV KLASDGGRSD PAVAPGTPGT PGAAGYNSFT DNSGYDVSVS KSRYGGIRAI QEEEEADAKD
0901: ARGRKAAAKF SVSDIWELQR QEGPLLILGF LMGINAGAVF SVFPLLLGQA VQVYFDPDTD KMRRQIGYLA LAVVGLGFAC ILTMTGQQGF CGWAGARLTM
1001: RVRDRLFRAI MRQEPAWFDE EDNAMGVLVT RLARDAIAFR SMFGDRYAVL LMAVGSAGVG LGICFGLDWR LTLIAMACTP LTLGASYLNL LINVGARSDE
1101: AAYARASSIA AGAVSNVRTV AALCAQGGIV GTFNRALDGP SAKAQRKSQY MGIILGLSQG AMYGAYTVTL WAGAYFITKG WSTFGDVSKI FLILVLSSFS
1201: VGQLAGLAPD TSGAPTAIAG ILSILKRRPT INEEGTKRRT IKDGKPMDVE LRKVIFAYPS RPDVTVLNDF SLRVKFGSTV AVVGPSGSGK STVVWLVQRF
1301: YDPLGGTVTV GGMDVRELDL KWLRGECAMV GQEPALFSGS IRENIGFGNP KAAWAEIENA AKEANIHKFI AGLPQGYDTQ VGESGVQLSG GQKQRIAIAR
1401: AVLKQSRILL LDEASSALDL ESEKHVQEAL RRVSRRATTI TVAHRLSTIR DADRIAVVSA GRTVEFGSHE TLLANHRDGL YAAMVKAEIE AQAFA

Best Arabidopsis Sequence Match ( AT1G02520.2 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.