Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 97.93 | 97.93 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 97.54 | 97.54 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 94.04 | 94.26 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 94.04 | 94.26 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 83.07 | 83.13 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 81.56 | 81.88 |
| KXG33192 | Sorghum | cytosol | 78.93 | 78.25 |
| Zm00001d043762_P001 | Maize | cytosol | 79.01 | 78.08 |
| TraesCS3A01G258200.1 | Wheat | peroxisome | 67.09 | 67.52 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 65.74 | 65.74 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 68.92 | 65.38 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.42 | 65.06 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 60.97 | 62.31 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 62.48 | 61.41 |
| Bra012621.1-P | Field mustard | plasma membrane | 59.78 | 60.3 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 54.61 | 59.12 |
| KRH21125 | Soybean | plasma membrane | 59.22 | 59.08 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 58.19 | 59.08 |
| Solyc02g071350.2.1 | Tomato | plastid | 59.14 | 58.91 |
| AT4G18050.2 | Thale cress | plasma membrane | 58.27 | 58.83 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.44 | 58.72 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 58.82 | 58.64 |
| KRH11119 | Soybean | plasma membrane | 58.11 | 58.62 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 58.9 | 58.48 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 45.31 | 58.46 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 58.11 | 57.79 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 49.84 | 57.47 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 57.0 | 56.77 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 56.12 | 56.08 |
| TraesCS1A01G081300.1 | Wheat | unclear | 56.84 | 56.03 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 55.88 | 55.84 |
| AT5G46540.1 | Thale cress | golgi | 54.77 | 55.21 |
| Bra017539.1-P | Field mustard | plasma membrane | 42.93 | 52.38 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.13 | 41.96 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.21 | 41.94 |
| TraesCS6A01G264900.3 | Wheat | golgi | 42.05 | 41.79 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 40.86 | 41.72 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 40.46 | 40.85 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 38.16 | 37.91 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 23.37 | 37.6 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 36.73 | 36.55 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 37.92 | 34.05 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 37.92 | 33.85 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 37.84 | 31.84 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G009900 | EnsemblPlants:TraesCS2A01G009900.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr2A:-:3905386..3930750
Molecular Weight (calculated)
135906.0 Da
IEP (calculated)
6.745
GRAVY (calculated)
0.138
Length
1258 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDTAAVAAEG EEESVGQQEK VSFMGMFRYA DGTDLLLMLV GTVAALANGV SQPLMTIIFG DTLNAFGDAT GDDVLQRVNK VVLKFVYLGI GTTIVSFLQV
0101: SCWTLTGERQ ATRIRSLYLK SVLRQDISFF DLEMTTGQIV SRMSGDTVLV QDAIGEKVGK FQSLVATFVG GFIVGFVKGW LLSLVMLASI PPVVLTGAVV
0201: AKLLSKISSR CQASYSAAGN VVEQTIGAIK TVVSFNGEKQ AITTYNKLIH KSYKTAVEEG LTNGFGMGSA FFALFSSYGL AIWYGGKLAL TKGYTGGQVI
0301: TVILAIIIGA GTLGNAAPCM TAFVEGQSAA HRLFTTIRRK PKIDPDDNNG KQLEDMRGEV ELKVVYFSYP ARPEQLIFDG FSLLVPSGTT MAIVGESGSG
0401: KSTVVSLVER FYDPHDGEVL IDGINIKSLH LDSIRGKIGL VSQEPVLFMT SIKDNITYGK EDATIEEIKR AAELANAAIF IDKCWKGYDT MVGQRGAQLS
0501: GGQKQRIAIA RAIIKNPKIL LLDEATSALD VESERIVQEA LDRIMVDRTT LVVAHRLTTV RNADCISVVQ QGKIVEQGSH DELVLNLDGA YSQLVLLQES
0601: HKEHKIDRRL STPRSKSKSL SMKRSISGSI GNSSGHSFTL PFGLPSAIEF PGGNETHGQN REELNGDGEV PKKAPMVQLA LLNKPEVPIL LLGSLAAAVH
0701: GVLFPVFGLI LSGAIKAFYE QPDKLRKDTS FWGLMCVVMG IISIISIPVE FSLFGLAGGK LIERIRALSF QSIVHQEVAW FDDPRNSSGA LGARLSIDSS
0801: NVRRLVGDNL SLMVQIISNL VTGVVIAIIA DWKLALIIIC VIPLTGIQGY ANVKFLNGFS QDAKMMNEDA SQVATDAVSS IRTVASFCSE KRITRIYEQK
0901: CEASKNQGFK TGIAGGIGFG FSFLMLYLTY ALCFYVGGQF VRHGKSNFGD VFEVFFALML ATLGVSQTSA MASDSKKAKD SAISVFALLD RKSEIDSSSN
1001: EGLTLDELKG NIDFRHVSFN YPTRPDVVIF NNFTLHIPYG KTIALVGESG CGKSTVISLL ERFYNPDSGT ILLDGVEMKS LNINWLRKQT GLVSQEPVLF
1101: NDTIRANIAY GKDGEVSEEE VIAAAKASNA HEFISSLPQG YETSVGERGI QLSGGQKQRV AIARAILKDP KILLLDEATS ALDAESERIV QHALDHVMVG
1201: RTTVAVAHRL STIKGADIIA VLKDGAIVEK GGHESLMNIK DGVYASLVEL RSAHHENA
0101: SCWTLTGERQ ATRIRSLYLK SVLRQDISFF DLEMTTGQIV SRMSGDTVLV QDAIGEKVGK FQSLVATFVG GFIVGFVKGW LLSLVMLASI PPVVLTGAVV
0201: AKLLSKISSR CQASYSAAGN VVEQTIGAIK TVVSFNGEKQ AITTYNKLIH KSYKTAVEEG LTNGFGMGSA FFALFSSYGL AIWYGGKLAL TKGYTGGQVI
0301: TVILAIIIGA GTLGNAAPCM TAFVEGQSAA HRLFTTIRRK PKIDPDDNNG KQLEDMRGEV ELKVVYFSYP ARPEQLIFDG FSLLVPSGTT MAIVGESGSG
0401: KSTVVSLVER FYDPHDGEVL IDGINIKSLH LDSIRGKIGL VSQEPVLFMT SIKDNITYGK EDATIEEIKR AAELANAAIF IDKCWKGYDT MVGQRGAQLS
0501: GGQKQRIAIA RAIIKNPKIL LLDEATSALD VESERIVQEA LDRIMVDRTT LVVAHRLTTV RNADCISVVQ QGKIVEQGSH DELVLNLDGA YSQLVLLQES
0601: HKEHKIDRRL STPRSKSKSL SMKRSISGSI GNSSGHSFTL PFGLPSAIEF PGGNETHGQN REELNGDGEV PKKAPMVQLA LLNKPEVPIL LLGSLAAAVH
0701: GVLFPVFGLI LSGAIKAFYE QPDKLRKDTS FWGLMCVVMG IISIISIPVE FSLFGLAGGK LIERIRALSF QSIVHQEVAW FDDPRNSSGA LGARLSIDSS
0801: NVRRLVGDNL SLMVQIISNL VTGVVIAIIA DWKLALIIIC VIPLTGIQGY ANVKFLNGFS QDAKMMNEDA SQVATDAVSS IRTVASFCSE KRITRIYEQK
0901: CEASKNQGFK TGIAGGIGFG FSFLMLYLTY ALCFYVGGQF VRHGKSNFGD VFEVFFALML ATLGVSQTSA MASDSKKAKD SAISVFALLD RKSEIDSSSN
1001: EGLTLDELKG NIDFRHVSFN YPTRPDVVIF NNFTLHIPYG KTIALVGESG CGKSTVISLL ERFYNPDSGT ILLDGVEMKS LNINWLRKQT GLVSQEPVLF
1101: NDTIRANIAY GKDGEVSEEE VIAAAKASNA HEFISSLPQG YETSVGERGI QLSGGQKQRV AIARAILKDP KILLLDEATS ALDAESERIV QHALDHVMVG
1201: RTTVAVAHRL STIKGADIIA VLKDGAIVEK GGHESLMNIK DGVYASLVEL RSAHHENA
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.