Factsheet for GSMUA_Achr2P20180_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0695800-01	Rice	plasma membrane	15.9	59.16
TraesCS6B01G145800.1	Wheat	cytosol	15.28	58.89
VIT_10s0003g02540.t01	Wine grape	plasma membrane	66.36	52.56
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	28.82	51.56
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	58.36	51.45
HORVU3Hr1G021600.2	Barley	peroxisome, plasma membrane, vacuole	59.9	50.74
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	60.21	50.52
Os05t0548300-01	Rice	plasma membrane	30.15	50.52
Bra012621.1-P	Field mustard	plasma membrane	64.41	50.36
AT4G18050.2	Thale cress	plasma membrane	64.21	50.24
VIT_10s0003g02570.t01	Wine grape	plasma membrane	63.79	50.2
Solyc02g071350.2.1	Tomato	plastid	65.03	50.2
PGSC0003DMT400007960	Potato	plasma membrane	64.82	50.08
KRH21125	Soybean	plasma membrane	64.31	49.72
GSMUA_Achr1P25070_001	Banana	plasma membrane	46.05	49.56
KRH11119	Soybean	plasma membrane	63.08	49.32
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	62.87	48.88
TraesCS3D01G257500.1	Wheat	plasma membrane	62.26	48.33
TraesCS3A01G257500.1	Wheat	plasma membrane	62.26	48.29
KXG33192	Sorghum	cytosol	62.67	48.15
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	41.23	48.14
TraesCS3B01G290300.2	Wheat	peroxisome	62.36	47.99
Zm00001d043762_P001	Maize	cytosol	62.36	47.76
VIT_10s0003g02580.t01	Wine grape	plasma membrane	61.95	47.75
Solyc02g071340.1.1	Tomato	plasma membrane	61.85	47.74
CDY35168	Canola	golgi, peroxisome, plasma membrane	53.33	47.66
Os02t0323000-01	Rice	cytosol, peroxisome	20.62	47.52
Zm00001d005528_P001	Maize	plasma membrane	58.36	47.3
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	61.74	47.07
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	61.54	46.95
KXG35311	Sorghum	plasma membrane	60.41	46.93
AT5G46540.1	Thale cress	golgi	60.0	46.88
TraesCS3A01G369700.1	Wheat	peroxisome	61.13	46.56
TraesCS3D01G257900.1	Wheat	peroxisome	60.21	46.51
KXG32655	Sorghum	peroxisome	61.44	46.4
HORVU3Hr1G065320.47	Barley	plasma membrane	60.41	46.27
TraesCS3D01G258100.1	Wheat	plasma membrane	59.28	46.24
Zm00001d009447_P002	Maize	plasma membrane	59.79	46.12
HORVU2Hr1G001530.10	Barley	plasma membrane	59.08	45.9
HORVU2Hr1G001630.2	Barley	plasma membrane	59.08	45.9
Os05t0548500-00	Rice	plasma membrane	59.28	45.87
PGSC0003DMT400034908	Potato	plasma membrane	59.08	45.75
Os01t0534700-00	Rice	plasma membrane	51.9	45.75
TraesCS3A01G258200.1	Wheat	peroxisome	58.56	45.68
HORVU3Hr1G065280.1	Barley	plasma membrane	59.08	45.64
TraesCS2B01G012300.1	Wheat	plasma membrane	58.77	45.55
TraesCS2D01G010500.1	Wheat	plasma membrane	58.67	45.47
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	58.77	45.33
TraesCS2A01G009900.1	Wheat	plasma membrane	58.46	45.31
Zm00001d011644_P002	Maize	plasma membrane	59.69	45.29
Solyc03g005860.2.1	Tomato	plasma membrane	58.36	45.19
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	61.13	45.05
TraesCS2D01G010400.1	Wheat	plasma membrane	57.74	44.93
TraesCS2A01G009600.1	Wheat	plasma membrane	57.74	44.93
HORVU6Hr1G021320.43	Barley	peroxisome	58.15	44.82
TraesCS6B01G145600.1	Wheat	peroxisome	58.05	44.78
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	41.74	44.77
TraesCS2B01G012100.3	Wheat	plasma membrane	57.54	44.77
TraesCS5A01G495900.1	Wheat	plasma membrane	58.15	44.75
TraesCS1B01G387400.1	Wheat	peroxisome	58.05	44.74
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	58.05	44.74
TraesCS3A01G258000.1	Wheat	mitochondrion	60.72	44.65
Os01t0695700-00	Rice	plasma membrane	57.85	44.51
HORVU1Hr1G078450.24	Barley	plasma membrane	57.74	44.51
GSMUA_Achr9P16700_001	Banana	plasma membrane	57.85	44.41
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	57.74	44.37
TraesCS2B01G012200.1	Wheat	golgi	49.03	44.3
TraesCS3B01G291100.3	Wheat	peroxisome	57.33	44.22
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	57.33	44.19
TraesCS3B01G290700.1	Wheat	peroxisome	47.49	44.18
EES01319	Sorghum	cytosol	57.54	44.03
Bra017539.1-P	Field mustard	plasma membrane	46.46	43.94
TraesCS3D01G258200.2	Wheat	peroxisome	56.72	43.92
TraesCS3A01G258400.3	Wheat	peroxisome	56.62	43.88
HORVU3Hr1G065240.14	Barley	cytosol	57.54	43.83
TraesCS3B01G291000.1	Wheat	peroxisome	56.51	43.8
Zm00001d043766_P005	Maize	cytosol	56.51	43.11
GSMUA_Achr8P24160_001	Banana	plasma membrane	44.1	38.15
GSMUA_Achr4P09980_001	Banana	plasma membrane	37.64	32.08
OQU78384	Sorghum	plasma membrane	59.49	30.75
GSMUA_Achr4P04430_001	Banana	cytosol, peroxisome, plasma membrane	41.23	29.67
GSMUA_Achr4P12130_001	Banana	cytosol	40.0	28.95
GSMUA_Achr3P17720_001	Banana	peroxisome	33.33	25.96
GSMUA_Achr1P18340_001	Banana	plasma membrane	38.26	17.83
GSMUA_Achr4P17010_001	Banana	peroxisome	20.21	17.83

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr2G20180_001
EnsemblPlants:GSMUA_Achr2P20180_001	EnsemblPlants:GSMUA_Achr2T20180_001	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M0S9K9
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24221	PANTHER:PTHR24221:SF204	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI0002963897	SEG:seg	:	:	:	:

Description

Putative ABC transporter B family member 11 [Source:GMGC_GENE;Acc:GSMUA_Achr2G20180_001]

Coordinates

chr2:-:20062378..20070601

Molecular Weight (calculated)

105182.0 Da

IEP (calculated)

7.878

GRAVY (calculated)

0.218

Length

975 amino acids

Sequence
(BLAST)

001: MTTGTIGAIG SGLAMPIMTF IFAEVINIFG VADRESIVRE VSKVVLKFVY LAAGSGIASF LQVACWMITG ERQATRIRGL YLKAILRQEI GFFDNETSTG
101: EVIGRMSGDT ILIQDAIGEK VGKCLQLAAT FFGSFVVAFT KGWLLSLVLI ASLPLTVIAG AAMSLIIFRS STRGQKAYAE AGIVVEHTVG SIRTVAAFNG
201: EKQAIDDYKQ LIKKAYGAVV QEGIAAGVGI GCVLMFIFCN YGLAVWYGAK LIIEKGYIGA DVFNCMVTVT TGAMSLGQAS PCLTAFSAGQ AAAYKMFETI
301: NRKPEIDVYD TSGIVLEDIK GDVELKDVRF SYPARPDQAA KLANAAKFID KMPNGLDTMV GEHGTQLSGG QKQRIAIARV ILKNPKILLL DEATSALDAE
401: SERIVQEALE TVMTNRTTIV VAHRLSTIKN ADTISVVSRG ELVEQGSHAE LIKDPYGSYS QLIRLQEFHE QEEESMIPER SSSLGRSRRN SMQASVRRLA
501: YLNKPETLVL VLGSIVAAIN GVIFPVFGIV ISSHYLFGVA GGKLIERVRF LSFERLVHQE IGWFDKPSNT SGQIGARLSA DASTVRKLVG DSLSLVVQNI
601: ATCIAGLAIA LLANWKLGLI VLVLLPLLSL QEYAQIKFLR GFSEDAKKMY EEASQVASDA VASIRTVASF CGEQNFLVHC SVLHVCFVLL HRSSVCARRP
701: GKLRPGVFFA LTLAALGVSQ SSTAASDINN ARDSARSIFA ILDRQSKIDS STDEGEVLQN VRGDIKFHHV SFRYPSRPHV QIFRDLCLSM PAGKTVALVG
801: ESGSGKSTVI ALLERFYDPE AGTISLDGMD IAKLKVSWVR QQMGLVSQEP VLFNGTIRTN IEYGKQGPVS EEELVAAAEA AGAHRFISGL PQGYDTNATS
901: ALDAESERVV QEALDRVMVG RTAVIVAHRL STIRGAETIA VVKNGVVAER GRHDTLMGIQ NGIYASLVAL QTSST

Best Arabidopsis Sequence Match ( AT1G02520.1 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.