Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 98.28 | 98.36 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 98.2 | 98.12 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 53.87 | 82.52 |
| KXG32655 | Sorghum | peroxisome | 81.63 | 80.87 |
| Os01t0534700-00 | Rice | plasma membrane | 69.12 | 79.93 |
| KXG35311 | Sorghum | plasma membrane | 78.34 | 79.84 |
| Zm00001d044564_P008 | Maize | cytosol, peroxisome, plasma membrane | 81.7 | 78.99 |
| Zm00001d005528_P001 | Maize | plasma membrane | 72.63 | 77.22 |
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 63.88 | 65.05 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 45.9 | 64.58 |
| TraesCS3D01G257900.1 | Wheat | peroxisome | 62.78 | 63.63 |
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 62.0 | 63.44 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 60.36 | 62.71 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 61.45 | 62.48 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 47.07 | 61.74 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 59.58 | 60.81 |
| TraesCS1D01G374300.1 | Wheat | cytosol, peroxisome, plasma membrane | 59.27 | 59.73 |
| KRH11119 | Soybean | plasma membrane | 58.17 | 59.66 |
| Bra012621.1-P | Field mustard | plasma membrane | 58.09 | 59.58 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 57.47 | 59.32 |
| KRH21125 | Soybean | plasma membrane | 58.25 | 59.08 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.41 | 59.05 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 58.17 | 58.95 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.17 | 58.91 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 49.88 | 58.48 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 58.25 | 58.39 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 57.39 | 58.02 |
| TraesCS3D01G258200.2 | Wheat | peroxisome | 57.08 | 57.98 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.47 | 57.43 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 56.68 | 57.4 |
| AT4G18050.2 | Thale cress | plasma membrane | 55.9 | 57.38 |
| AT5G46540.1 | Thale cress | golgi | 54.34 | 55.69 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 54.26 | 55.12 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 53.79 | 54.65 |
| Bra017539.1-P | Field mustard | plasma membrane | 43.0 | 53.35 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.3 | 42.83 |
| TraesCS6D01G250000.1 | Wheat | golgi | 42.22 | 42.82 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 42.38 | 42.64 |
| TraesCS7D01G068400.1 | Wheat | plasma membrane | 40.5 | 42.05 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 41.28 | 38.4 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 36.9 | 37.37 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 36.59 | 37.2 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 35.42 | 36.1 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 35.11 | 35.52 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 37.22 | 33.83 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 36.43 | 33.07 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 36.04 | 30.73 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF239 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G362700 | EnsemblPlants:TraesCS3D01G362700.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:477013081..477027398
Molecular Weight (calculated)
138497.0 Da
IEP (calculated)
7.778
GRAVY (calculated)
0.105
Length
1279 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGGRGREQGG ERDDVNGGGE DGADDGHERR PAAARVPLYR MFAFADRTDA ALMAVGAATA VANGMAQPLM TFIFGDVIDA FGSAASSRDV LHRVTKVIIN
0101: FVYLGIGAGL ASTLQVSCWT ITGERQAARI RAMYLKAILR QDIAFFDKEM STGQVVERMS GDTFLIQDAI GEKVGKIIQL LSTFFGGFVV AFVRGWLLTL
0201: VMLSSIPPVA VAGAIVSRMM TTLSTKMQAK YGDAGDIVQQ TIGTIRTVVS FNGEKQAITT YNKFIRKAYE SARREGAVSG LGVGSIMAIL FCSYGLAVWY
0301: GSKLIVDRGY NGGIVITIIM SVMVGAMSLG QAAPSITAFA QGQGAAYRMF KTIERQPCID VYNTTGIILE DIKGDVELKD VYFSYPTRPE HLVFDGFSLR
0401: VPSGTTMALV GVSGSGKSTV VSLVERFYDP QSGEVLIDGV DIRRMTLGWI RGKIGLVSQE PVLFSSTIRE NISYGKDGLN LEEIRRAIEL ANAANFIDKL
0501: PNGLETMVGE RGIQLSGGQK QRIAIARAII KNPRILLLDE ATSALDMESE RIVQEALDRV MLERTTIIVA HRLSTVKNAD VISVLQHGKI VEQGSHVQLV
0601: NKPEGAYSQL IHLQETLQVA EAPNVDPDAI MENSFGSRSF TRKPRSQGSS FRRSNSKGSS FGHSGTHPYP APCDPMEFNN DQDLEESTDK ISSDRKKAPI
0701: GRLFYLNKPE ALVLALGSIA AAMHGAILPV YGILISSAIK TFYEPPAELL KDSRFWASMF AMLGACALVL IPIEYFLFGL AGGKLVERIR SLTFRSVMHQ
0801: DINWFDKPEH SSGAIGARLS TDALNVKRLV GENLALNVQT ISTIIVGFTI AMVANWKLAL IITVVVPLVG FQAYAQMKFL KGLNKNAKLK YEEASQVATD
0901: AVGGIRTVAS FCAEQKVMDA YEKKCESPTR QGVREGVVGG LGFGFSFLVF YLTYALCFYV GAKFVREGTA TFPEVFRVFF VLVLAATGIS RTSAVGADST
1001: KASESAISVF EILDRKSKID SSSEEGMVVA NLRGDIEFQN VCFSYPLRPN VQIFTDLSLS IPSGKTAALV GESGSGKSTA IALLERFYDP SSGRILLDGV
1101: ELPTLKVSWL RLQIGLVAQE PVLFNDTIRA NIAYGKQGEA SEEEIVAAAE AANAHQFISG LPDGYNTVVG ERGIQLSGGQ KQRVAIARAV VKDPKVLLLD
1201: EATSALDAES ERVVQEALDR VMVGRTTVVV AHRLSTVRGA DIISVVKNGM IVEKGRHEEL MRIKDGTYAS LVELSSTSR
0101: FVYLGIGAGL ASTLQVSCWT ITGERQAARI RAMYLKAILR QDIAFFDKEM STGQVVERMS GDTFLIQDAI GEKVGKIIQL LSTFFGGFVV AFVRGWLLTL
0201: VMLSSIPPVA VAGAIVSRMM TTLSTKMQAK YGDAGDIVQQ TIGTIRTVVS FNGEKQAITT YNKFIRKAYE SARREGAVSG LGVGSIMAIL FCSYGLAVWY
0301: GSKLIVDRGY NGGIVITIIM SVMVGAMSLG QAAPSITAFA QGQGAAYRMF KTIERQPCID VYNTTGIILE DIKGDVELKD VYFSYPTRPE HLVFDGFSLR
0401: VPSGTTMALV GVSGSGKSTV VSLVERFYDP QSGEVLIDGV DIRRMTLGWI RGKIGLVSQE PVLFSSTIRE NISYGKDGLN LEEIRRAIEL ANAANFIDKL
0501: PNGLETMVGE RGIQLSGGQK QRIAIARAII KNPRILLLDE ATSALDMESE RIVQEALDRV MLERTTIIVA HRLSTVKNAD VISVLQHGKI VEQGSHVQLV
0601: NKPEGAYSQL IHLQETLQVA EAPNVDPDAI MENSFGSRSF TRKPRSQGSS FRRSNSKGSS FGHSGTHPYP APCDPMEFNN DQDLEESTDK ISSDRKKAPI
0701: GRLFYLNKPE ALVLALGSIA AAMHGAILPV YGILISSAIK TFYEPPAELL KDSRFWASMF AMLGACALVL IPIEYFLFGL AGGKLVERIR SLTFRSVMHQ
0801: DINWFDKPEH SSGAIGARLS TDALNVKRLV GENLALNVQT ISTIIVGFTI AMVANWKLAL IITVVVPLVG FQAYAQMKFL KGLNKNAKLK YEEASQVATD
0901: AVGGIRTVAS FCAEQKVMDA YEKKCESPTR QGVREGVVGG LGFGFSFLVF YLTYALCFYV GAKFVREGTA TFPEVFRVFF VLVLAATGIS RTSAVGADST
1001: KASESAISVF EILDRKSKID SSSEEGMVVA NLRGDIEFQN VCFSYPLRPN VQIFTDLSLS IPSGKTAALV GESGSGKSTA IALLERFYDP SSGRILLDGV
1101: ELPTLKVSWL RLQIGLVAQE PVLFNDTIRA NIAYGKQGEA SEEEIVAAAE AANAHQFISG LPDGYNTVVG ERGIQLSGGQ KQRVAIARAV VKDPKVLLLD
1201: EATSALDAES ERVVQEALDR VMVGRTTVVV AHRLSTVRGA DIISVVKNGM IVEKGRHEEL MRIKDGTYAS LVELSSTSR
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.