Factsheet for TraesCS7D01G284100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G134500.3
TraesCS5B01G131200.1
TraesCS5D01G139000.1
TraesCS7A01G492400.1
TraesCS7B01G398100.1
TraesCS7D01G478800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36910.1	TraesCS5A01G134500.3	AT3G21640.1	14517332
AT2G36910.1	TraesCS5B01G131200.1	AT3G21640.1	14517332
AT2G36910.1	TraesCS5D01G139000.1	AT3G21640.1	14517332
AT2G36910.1	TraesCS7A01G492400.1	AT5G57090.1	17237354
AT2G36910.1	TraesCS7B01G398100.1	AT5G57090.1	17237354
AT2G36910.1	TraesCS7D01G478800.1	AT5G57090.1	17237354

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G284900.1	Wheat	plasma membrane	89.75	99.04
TraesCS7B01G181700.1	Wheat	cytosol	98.47	98.98
HORVU7Hr1G063020.3	Barley	cytosol	97.09	94.61
Os08t0564300-04	Rice	plasma membrane	82.04	83.93
Zm00001d031871_P001	Maize	cytosol	85.89	83.4
AT2G36910.1	Thale cress	peroxisome	72.36	77.37
GSMUA_Achr4P12130_001	Banana	cytosol	75.64	77.21
Solyc09g008240.2.1	Tomato	peroxisome	72.73	76.1
PGSC0003DMT400009924	Potato	peroxisome	73.31	75.62
GSMUA_Achr4P04430_001	Banana	cytosol, peroxisome, plasma membrane	74.4	75.5
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	73.45	75.43
CDY46744	Canola	cytosol, peroxisome, plasma membrane	73.31	75.34
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	73.31	75.28
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	73.45	75.26
KRH32507	Soybean	cytosol, nucleus, plasma membrane	73.45	75.2
CDX79704	Canola	plasma membrane	73.16	75.02
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	72.8	74.81
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	72.87	74.72
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.38	74.52
OQU80682	Sorghum	plasma membrane	80.65	71.97
TraesCS2D01G322600.1	Wheat	cytosol, peroxisome, plasma membrane	48.51	52.81
TraesCS2D01G523100.2	Wheat	cytosol	47.49	51.38
TraesCS6D01G250000.1	Wheat	golgi	44.58	48.61
TraesCS7D01G068400.1	Wheat	plasma membrane	39.27	43.83
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	39.85	42.95
TraesCS3D01G257500.1	Wheat	plasma membrane	37.89	41.48
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	38.4	41.28
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	27.27	41.25
TraesCS2D01G010500.1	Wheat	plasma membrane	37.6	41.1
TraesCS3D01G258100.1	Wheat	plasma membrane	37.09	40.8
TraesCS2D01G010400.1	Wheat	plasma membrane	37.16	40.78
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	37.38	40.63
TraesCS3D01G258200.2	Wheat	peroxisome	37.09	40.51
TraesCS3D01G257900.1	Wheat	peroxisome	36.8	40.1
TraesCS2D01G339000.1	Wheat	plasma membrane	36.8	40.06
TraesCS6D01G131900.1	Wheat	plasma membrane	36.29	39.76
TraesCS7D01G298600.1	Wheat	peroxisome	36.0	39.35
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	36.22	39.24
TraesCS3D01G541700.1	Wheat	cytosol, plasma membrane, vacuole	39.42	38.52
TraesCS7D01G298400.1	Wheat	peroxisome	35.13	38.21
TraesCS4D01G203900.2	Wheat	cytosol, plasma membrane, plastid	38.84	37.9
TraesCS4D01G296900.1	Wheat	peroxisome	38.47	35.27

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ncoils:Coil	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008361	GO:GO:0009506	GO:GO:0009605	GO:GO:0009606	GO:GO:0009607	GO:GO:0009624
GO:GO:0009628	GO:GO:0009637	GO:GO:0009639	GO:GO:0009640	GO:GO:0009719	GO:GO:0009733
GO:GO:0009791	GO:GO:0009908	GO:GO:0009926	GO:GO:0009958	GO:GO:0009987	GO:GO:0010315
GO:GO:0010328	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0043481	GO:GO:0048443	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF119	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G284100	EnsemblPlants:TraesCS7D01G284100.1	TIGR:cd03249	SEG:seg

Description

No Description!

Coordinates

chr7D:+:298509620..298514975

Molecular Weight (calculated)

148419.0 Da

IEP (calculated)

8.184

GRAVY (calculated)

0.062

Length

1375 amino acids

Sequence
(BLAST)

0001: MSSDPEEIKA RVVVHGAGAD ANAADEWARP ELEAFHLPST SQPPHLFHPP HPEPEAAEQS TPAPAVAAAT GTNNASGSPP PPRSPPPAPL ETEQLPPNAK
0101: PPADEKPPPP APAAALRDLF RFADGLDRVL MAVGTLGALV HGCSLPVFLR FFADLVDSFG SHADDPDTMV RLVVKYAFYF LVVGAAIWAS SWAEISCWMW
0201: TGERQSTRMR IRYLQAALKQ DVSFFDTDVR TSDVIYAINA DAVIVQDAIS EKLGNLIHYM ATFVAGFVVG FTAAWQLALV TLAVVPLIAV IGGLTAATMG
0301: KLSSKSQDAL SSASNIAEQA LSQIRIVQSF VGEQRVAQAY SEALAVAQSI GYRNGFAKGL GLGGTYFTVF CCYALLLWYG GHLVRGHHTN GGLAIATMFS
0401: VMIGGLGLGQ SAPSMAAFAK ARVAAAKIFR IIDHTPGITK EGVELESVTG RLELRNVEFA YPSRPDTPIL RRFSLSVPAG KTIALVGSSG SGKSTVVSLI
0501: ERFYDPSSGQ IMLDGVELKD LKLRWLRSQI GLVSQEPALF ATSIRENLLL GREEASQVEM EEAARVANAH SFIIKLPDGY DTQVGERGLQ LSGGQKQRIA
0601: IARAMLKNPA ILLLDEATSA LDSESEKLVQ EALDRFMIGR TTLVIAHRLS TIRKADLVAV LQAGAVSEMG AHDDLMARGD SGAYAKLIRM QEQAHEAALV
0701: SARRSSARPS SARNSVSSPI MMRNSSYGRS PYSRRLSDFS TADFSLSVIH DPAAHRMGMG MGMGMEKLAF RAQASSFWRL AKMNSPEWGY ALAGSVGSMV
0801: CGSFSAIFAY ILSAVLSIYY TPDPRHMDRE IAKYCYLLIG MSSAALLFNT VQHLFWDTVG ENLTKRVREK MLTAVLRNEM AWFDMEANAS AHIAARLALD
0901: AQNVRSAIGD RISIIVQNSA LMLVACTAGF VLQWRLALVL LAVFPLVVGA TVLQKMFMKG FSGDLEAAHA KATQIAGEAV ANVRTVAAFN SEDKITRLFE
1001: ANLQRPLRRC FWKGQIAGIG YGVAQFLLYA SYALGLWYAA WLVKHGVSDF SKTIRVFMVL MVSANGAAET LTLAPDFIKG GRAMQSVFET IDRKTEIEPD
1101: DVDAAAVPER PRGDVELKHV DFSYPSRPDV QVFRDLSLRA RAGRTLALVG PSGCGKSSVL ALIQRFYEPS SGRVLLDGKD IRKYNLKALR RVVAMVPQEP
1201: FLFAGTIHDN IAYGREGATE AEVVEAATQA NAHKFVSALP EGYKTCVGER GVQLSGGQRQ RIAIARALVK QAAIMLLDEA TSALDAESER CVQEALDRAG
1301: SGSGRTTIVV AHRLATVRNA HTIAVIDDGK VVEQGSHSHL LNHHPDGCYA RMLQLQRLTP HTLAVPGPGP SASNV

Best Arabidopsis Sequence Match ( AT2G36910.1 )
(BLAST)

0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA

Arabidopsis Description

ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.