Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.35 | 98.66 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 98.27 | 98.58 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 96.22 | 96.52 |
| Os05t0548500-00 | Rice | plasma membrane | 78.25 | 78.81 |
| Zm00001d009448_P001 | Maize | cytosol, peroxisome, plasma membrane | 76.99 | 77.29 |
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 68.79 | 69.51 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 47.68 | 66.56 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 65.09 | 65.66 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 63.83 | 64.64 |
| TraesCS3D01G257900.1 | Wheat | peroxisome | 63.83 | 64.18 |
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 62.33 | 63.28 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.78 | 61.98 |
| TraesCS3D01G258200.2 | Wheat | peroxisome | 60.44 | 60.92 |
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 59.73 | 59.27 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 56.26 | 58.0 |
| Bra012621.1-P | Field mustard | plasma membrane | 56.97 | 57.98 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 44.37 | 57.74 |
| KRH21125 | Soybean | plasma membrane | 57.13 | 57.49 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 56.11 | 57.47 |
| AT4G18050.2 | Thale cress | plasma membrane | 55.63 | 56.66 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 55.71 | 56.02 |
| Solyc02g071350.2.1 | Tomato | plastid | 55.71 | 55.98 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 47.99 | 55.82 |
| KRH11119 | Soybean | plasma membrane | 54.77 | 55.73 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 55.24 | 55.41 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 23.72 | 55.23 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 55.0 | 54.7 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 54.29 | 54.55 |
| AT5G46540.1 | Thale cress | golgi | 53.03 | 53.93 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 52.64 | 53.06 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 52.09 | 52.5 |
| OQU78384 | Sorghum | plasma membrane | 77.23 | 51.96 |
| Bra017539.1-P | Field mustard | plasma membrane | 40.82 | 50.24 |
| TraesCS7D01G068400.1 | Wheat | plasma membrane | 41.61 | 42.86 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.77 | 41.96 |
| TraesCS6D01G250000.1 | Wheat | golgi | 41.37 | 41.63 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 41.69 | 41.62 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 37.98 | 38.16 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 36.33 | 36.65 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 39.24 | 36.22 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 35.78 | 36.18 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 35.07 | 35.21 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 37.83 | 34.07 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 37.27 | 33.62 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 37.35 | 31.6 |
Protein Annotations
| MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF275 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G374300 | EnsemblPlants:TraesCS1D01G374300.1 | TIGR:cd03249 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:451875898..451881628
Molecular Weight (calculated)
136607.0 Da
IEP (calculated)
6.684
GRAVY (calculated)
0.113
Length
1269 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGETNNARAD GVVKGGEEEE KGRKKMTKGG KASFHDLFNN ADAADVVLML VGTVAALASG MSQVVMSIIF GRMVDAFGGA TRDTILPRVD KVVLEFVYLA
0101: IGTWPACFLQ ISCWTVTGER QAARFRSLYL KSVLRQDMAF FDTEMKGGQV VFGTSADTIL IQDAIGEKVG KFLQLLTTFI GGFTVAFIKG WLLTLVMLST
0201: IPPLIVAAAI VSKMLSKVSS EGLASYIDAG NIVEQTIGSI RTVVSFNGEK KAMVQYNNLI KKAYKGTIKE GAIQGFGLGF LSLVYFSSFG LIVWYGSKLT
0301: LDRGYSGADV MNILFAILVG ARALGDATPC IASFDEGKVA AYRLFTTINR KPEIDYDDTT GVVLEDIKGD VELRDVSFSY PSRPEQLIFD GFSMHVSSGT
0401: TMAIVGESGS GKTTVINLVE RFYDPQAGEV LIDGMNIKSF KLEWMRGKIG LVNQEPVLFM TSIKENIAYG KEDATLEEIK KAAELANAAR FIENLPNGYD
0501: TAVGQRGAQL SGGQKQRIAV ARAILKNPKI LLLDEATSAL DLESERVVQE ALSNIMVGRT TIVVAHRLST VRNAHCISVV SGGKIVEQGH HDKLVKDPDG
0601: AYSQLIRLQE THQETCEQLN AGLSSPLSKR NQAQSISTSS AGSSHHSVIP PINLPGPTAL LDYDGADGEK ASENTDVKVS KKAPMGRLIS LNRPETAFLL
0701: FGSLAAAIDG TVYPMMGLVM ASAAKTFYEL PADKRQEDSI FWGLLCIGLG AMGMISKLAN SLLFAIAGGK LIERIRAFTF KNIVYQDTAW FDHPANSSGA
0801: LGGRLCVDAL NVRRLVGGNL ALIIQCTATL ICGIVIAMIA DWKLSLVILI VVPLMGLQAY AQVKFLQGFS QNAKTMYEEA SQVATDAVGN MRTVASFCAE
0901: KRVVTKYNQK CQASKNQGIR TGIVGGIGFG FSYTMLYVTS ALCYYVGAKF ISQGNSDFGG VFKAYFALVL AMIGASQTSA MASDSAKAND SATSIFKILD
1001: RKSQIDSSSE EGSTMELVKG DIDFMHISFK YPSRPDVQIF SDFTLNIPSR KTVALVGQSG SGKSTVIALL ERFYDPDSGA ILLDGVEIKN LKLSWLRDQM
1101: GLVSQEPVLF NDTIRANIAY GKHEEVTEEE IAGAAKAANA HEFISSMPQG YSTSVGERGT QLSGGQKQRI AIARAILKDP RILLLDEATS ALDAESESVV
1201: QDALDRVMLG RTTVTVAHRL STIQGADIIA VLKDGAIVEK GTHETLMGIA GGAYASLLEL RPNGIDLSY
0101: IGTWPACFLQ ISCWTVTGER QAARFRSLYL KSVLRQDMAF FDTEMKGGQV VFGTSADTIL IQDAIGEKVG KFLQLLTTFI GGFTVAFIKG WLLTLVMLST
0201: IPPLIVAAAI VSKMLSKVSS EGLASYIDAG NIVEQTIGSI RTVVSFNGEK KAMVQYNNLI KKAYKGTIKE GAIQGFGLGF LSLVYFSSFG LIVWYGSKLT
0301: LDRGYSGADV MNILFAILVG ARALGDATPC IASFDEGKVA AYRLFTTINR KPEIDYDDTT GVVLEDIKGD VELRDVSFSY PSRPEQLIFD GFSMHVSSGT
0401: TMAIVGESGS GKTTVINLVE RFYDPQAGEV LIDGMNIKSF KLEWMRGKIG LVNQEPVLFM TSIKENIAYG KEDATLEEIK KAAELANAAR FIENLPNGYD
0501: TAVGQRGAQL SGGQKQRIAV ARAILKNPKI LLLDEATSAL DLESERVVQE ALSNIMVGRT TIVVAHRLST VRNAHCISVV SGGKIVEQGH HDKLVKDPDG
0601: AYSQLIRLQE THQETCEQLN AGLSSPLSKR NQAQSISTSS AGSSHHSVIP PINLPGPTAL LDYDGADGEK ASENTDVKVS KKAPMGRLIS LNRPETAFLL
0701: FGSLAAAIDG TVYPMMGLVM ASAAKTFYEL PADKRQEDSI FWGLLCIGLG AMGMISKLAN SLLFAIAGGK LIERIRAFTF KNIVYQDTAW FDHPANSSGA
0801: LGGRLCVDAL NVRRLVGGNL ALIIQCTATL ICGIVIAMIA DWKLSLVILI VVPLMGLQAY AQVKFLQGFS QNAKTMYEEA SQVATDAVGN MRTVASFCAE
0901: KRVVTKYNQK CQASKNQGIR TGIVGGIGFG FSYTMLYVTS ALCYYVGAKF ISQGNSDFGG VFKAYFALVL AMIGASQTSA MASDSAKAND SATSIFKILD
1001: RKSQIDSSSE EGSTMELVKG DIDFMHISFK YPSRPDVQIF SDFTLNIPSR KTVALVGQSG SGKSTVIALL ERFYDPDSGA ILLDGVEIKN LKLSWLRDQM
1101: GLVSQEPVLF NDTIRANIAY GKHEEVTEEE IAGAAKAANA HEFISSMPQG YSTSVGERGT QLSGGQKQRI AIARAILKDP RILLLDEATS ALDAESESVV
1201: QDALDRVMLG RTTVTVAHRL STIQGADIIA VLKDGAIVEK GTHETLMGIA GGAYASLLEL RPNGIDLSY
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.