Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G291100.3 | Wheat | peroxisome | 98.02 | 98.1 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 96.76 | 97.3 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 94.86 | 93.75 |
| TraesCS3D01G258200.2 | Wheat | peroxisome | 86.72 | 87.13 |
| EES01319 | Sorghum | cytosol | 82.21 | 81.63 |
| Os01t0695700-00 | Rice | plasma membrane | 80.79 | 80.66 |
| Zm00001d043766_P005 | Maize | cytosol | 79.92 | 79.11 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 50.59 | 70.41 |
| TraesCS3D01G257900.1 | Wheat | peroxisome | 68.93 | 69.1 |
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 68.3 | 68.79 |
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 67.11 | 67.92 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 65.53 | 65.9 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 63.87 | 64.49 |
| TraesCS1D01G374300.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.98 | 61.78 |
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 59.05 | 58.41 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 56.68 | 58.25 |
| KRH11119 | Soybean | plasma membrane | 56.92 | 57.74 |
| Bra012621.1-P | Field mustard | plasma membrane | 56.68 | 57.5 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 44.19 | 57.33 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 55.97 | 57.14 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.43 | 56.7 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 48.77 | 56.55 |
| KRH21125 | Soybean | plasma membrane | 56.13 | 56.3 |
| AT4G18050.2 | Thale cress | plasma membrane | 55.41 | 56.26 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 55.34 | 55.34 |
| Solyc02g071350.2.1 | Tomato | plastid | 55.1 | 55.19 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 55.02 | 55.15 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 54.23 | 54.32 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 54.47 | 54.0 |
| AT5G46540.1 | Thale cress | golgi | 52.57 | 53.29 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 52.49 | 52.74 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 52.09 | 52.34 |
| Bra017539.1-P | Field mustard | plasma membrane | 40.4 | 49.56 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.26 | 41.33 |
| TraesCS6D01G250000.1 | Wheat | golgi | 40.95 | 41.08 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 41.19 | 40.99 |
| TraesCS7D01G068400.1 | Wheat | plasma membrane | 39.6 | 40.67 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 38.1 | 38.16 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 40.63 | 37.38 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 36.05 | 36.25 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 35.57 | 35.86 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 35.41 | 35.44 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 37.23 | 33.48 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 36.68 | 32.93 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 37.63 | 31.73 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF238 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G258300 | EnsemblPlants:TraesCS3D01G258300.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:360581591..360588994
Molecular Weight (calculated)
137612.0 Da
IEP (calculated)
7.844
GRAVY (calculated)
0.110
Length
1265 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDEVMRDRG EEEEAEGRER KDAGATKKKV AFFGMFRYAR RADFALMGVG TVAAMVNGMS EPLMTVVFAA VIESFGGSDN SAVLHRVSKV VMYYIYLGIG
0101: TALASFLQVS CWTMAGERQS ARIRSLYLEA VLKQDVSFFD VEMTTGEAIS RMSADTVLVQ DALGEKVGKY AQLLTTFVGG FVIGFVRGWM LALVMLACIP
0201: PSILSFATVS RLRAQISARR QASYDDAGNV VEQSIRAIRT VVSFNGEKKA VALYNALIKK AYKATVLEGL VTGLGIGCIF CVVFCSYSLA FWYGAKLIIS
0301: KGYTGGQVIN VVFAILTGSM AIGNASPSIS AIAEGQSAAH RLFEIINRKP KIDISDTSGI ELDDIKGDVE LNNVFFRYPA RPEQLILNGL SLQVPSGTTM
0401: AIVGESGSGK STLISLVERF YDPQAGEVLI DGINIKSLKL QWIRGKISLV SQEPLLFMTS IKDNITYGKE DATLEEIKRA AELANAANFI EKLPNAYETM
0501: VGQSGAQLSG GQKQRIAIAR AILKNPKVLL LDEATSALDV ESERVVQEAL NRIMVGITTL IVAHRLSTVR NADCITVVHQ GKVVEQGAHD QLIKDPDGAY
0601: CQLIKLQQVH TEGMHEVPYA SDSRLKNRSL SLEQSTRDSP RNRRQHSVKP LGLSGSDDLQ GPANTSSQEQ KEFGDSEAPQ KAPIGRLFNL NKPEAPILLL
0701: AVIAAFVHGL LFPLFSIMMS GGIRTFYYPA HQLRKDSRFW ALLCLLLAII SLIAIQLEFF LFGMAGGKLV ERVRALSFQS IMHQEVAWFD DPSNSSGALG
0801: ARLFIDALNI RRLVGDNLAI LVQCTITLIS GFAIAFASDW KLTLIVICVI PFLGLQNYIQ VKFLKGFSED AKVMYEDAGQ VVAEAVGSIR TVASFCAEKR
0901: VITMYSKKCQ ATMKQGIRSG MVGGLGFSFS NLMLYLTYAL CFYVGAQFVH DGKSTFKDVF RVYFALVFTA FGISQTSAMA SDSTKAQEST TSILAVIDRR
1001: SKINSTNDEG IKLEKVDGNI DFNHVSFKYP SRPDVQVFSD FTLGIPSGKT TALVGESGSG KSTVIALLER FYDPDSGTIS LDGTELKNLT LSWLRDQMGL
1101: VSQEPVLFND TIRANIAYGK RGEATEEEII TVAKAANAHE FISSLPQGYD TNVGERGTQL SGGQKQRVAI ARAILKDPRV LLLDEATSAL DAESERIVQD
1201: ALDKIMVSRT TIVVAHRLST IKGADTIAVI KDGSVAEKGK HESLMGIKGG VYASLVELHS KASAS
0101: TALASFLQVS CWTMAGERQS ARIRSLYLEA VLKQDVSFFD VEMTTGEAIS RMSADTVLVQ DALGEKVGKY AQLLTTFVGG FVIGFVRGWM LALVMLACIP
0201: PSILSFATVS RLRAQISARR QASYDDAGNV VEQSIRAIRT VVSFNGEKKA VALYNALIKK AYKATVLEGL VTGLGIGCIF CVVFCSYSLA FWYGAKLIIS
0301: KGYTGGQVIN VVFAILTGSM AIGNASPSIS AIAEGQSAAH RLFEIINRKP KIDISDTSGI ELDDIKGDVE LNNVFFRYPA RPEQLILNGL SLQVPSGTTM
0401: AIVGESGSGK STLISLVERF YDPQAGEVLI DGINIKSLKL QWIRGKISLV SQEPLLFMTS IKDNITYGKE DATLEEIKRA AELANAANFI EKLPNAYETM
0501: VGQSGAQLSG GQKQRIAIAR AILKNPKVLL LDEATSALDV ESERVVQEAL NRIMVGITTL IVAHRLSTVR NADCITVVHQ GKVVEQGAHD QLIKDPDGAY
0601: CQLIKLQQVH TEGMHEVPYA SDSRLKNRSL SLEQSTRDSP RNRRQHSVKP LGLSGSDDLQ GPANTSSQEQ KEFGDSEAPQ KAPIGRLFNL NKPEAPILLL
0701: AVIAAFVHGL LFPLFSIMMS GGIRTFYYPA HQLRKDSRFW ALLCLLLAII SLIAIQLEFF LFGMAGGKLV ERVRALSFQS IMHQEVAWFD DPSNSSGALG
0801: ARLFIDALNI RRLVGDNLAI LVQCTITLIS GFAIAFASDW KLTLIVICVI PFLGLQNYIQ VKFLKGFSED AKVMYEDAGQ VVAEAVGSIR TVASFCAEKR
0901: VITMYSKKCQ ATMKQGIRSG MVGGLGFSFS NLMLYLTYAL CFYVGAQFVH DGKSTFKDVF RVYFALVFTA FGISQTSAMA SDSTKAQEST TSILAVIDRR
1001: SKINSTNDEG IKLEKVDGNI DFNHVSFKYP SRPDVQVFSD FTLGIPSGKT TALVGESGSG KSTVIALLER FYDPDSGTIS LDGTELKNLT LSWLRDQMGL
1101: VSQEPVLFND TIRANIAYGK RGEATEEEII TVAKAANAHE FISSLPQGYD TNVGERGTQL SGGQKQRVAI ARAILKDPRV LLLDEATSAL DAESERIVQD
1201: ALDKIMVSRT TIVVAHRLST IKGADTIAVI KDGSVAEKGK HESLMGIKGG VYASLVELHS KASAS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.