Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G291100.3 | Wheat | peroxisome | 97.62 | 97.15 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.3 | 96.76 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 95.47 | 93.83 |
| EES01319 | Sorghum | cytosol | 82.35 | 81.32 |
| Os01t0695700-00 | Rice | plasma membrane | 81.0 | 80.43 |
| Zm00001d043766_P005 | Maize | cytosol | 80.05 | 78.8 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 68.6 | 68.66 |
| TraesCS3A01G258200.1 | Wheat | peroxisome | 67.17 | 67.6 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 65.74 | 65.74 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 68.84 | 65.31 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 64.15 | 64.41 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.16 | 61.82 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 59.3 | 58.28 |
| Bra012621.1-P | Field mustard | plasma membrane | 57.55 | 58.06 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 56.76 | 58.0 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 53.42 | 57.83 |
| KRH11119 | Soybean | plasma membrane | 56.84 | 57.34 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 55.88 | 56.74 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 43.88 | 56.62 |
| AT4G18050.2 | Thale cress | plasma membrane | 55.88 | 56.42 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 48.81 | 56.28 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.24 | 55.96 |
| KRH21125 | Soybean | plasma membrane | 56.04 | 55.91 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 56.04 | 55.64 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 55.17 | 54.99 |
| Solyc02g071350.2.1 | Tomato | plastid | 55.17 | 54.95 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 55.17 | 54.86 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 54.29 | 54.08 |
| TraesCS1A01G081300.1 | Wheat | unclear | 54.37 | 53.6 |
| AT5G46540.1 | Thale cress | golgi | 53.1 | 53.53 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 53.18 | 53.14 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 52.78 | 52.74 |
| Bra017539.1-P | Field mustard | plasma membrane | 40.3 | 49.18 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 40.38 | 41.23 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.26 | 41.09 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 40.94 | 40.68 |
| TraesCS6A01G264900.3 | Wheat | golgi | 40.94 | 40.68 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 39.98 | 40.37 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 38.24 | 37.99 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 22.89 | 36.83 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 35.37 | 35.21 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 37.2 | 33.4 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 36.73 | 32.79 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 38.16 | 32.11 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF238 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G258400 | EnsemblPlants:TraesCS3A01G258400.3 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3A:-:480147423..480154669
Molecular Weight (calculated)
136738.0 Da
IEP (calculated)
7.411
GRAVY (calculated)
0.136
Length
1258 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDEAMRDRG EEEETEGMER KDAGATKKVA FFGMFRYARR ADVALMGVGT VAAMVNGMSE PLMTVVFAAV IESFGGSDDS AVLHRVSKVV VYYIYLGIGT
0101: ALASFLQVSC WTMAGERQSA RIRSLYLEAV LKQDVSFFDV EMTTGEAISR MSADTVLVQD ALGEKLLTTF VGGFVIGFIR GWMLALVMLA CIPPSILSFA
0201: TVSRLRAQIS ARRQASYDDA GNVVEQSIRA IRTVVSFNGE KKAVALYNAL IKKAYKATVL EGLVTGLGIG CIFCVVFCSY SLAFWYGAKL IISKGYTGGQ
0301: VINVVFAILT GSMAIGNASP SISAIAEGQS AAHRLFEIIN RKPKIDISDT SGIELDDIKG DVELNNVFFR YPARPEQLIL NGLSLQVPSG TTMAIVGESG
0401: SGKSTLISLV ERFYDPQAGE VLIDGINIKS LKLKWIRGKI SLVSQEPLLF MTSIKDNITY GKEDATLEEI KRAAELANAA NFIEKLPNAY ETMVGQSGAQ
0501: LSGGQKQRIA IARAILRSPK VLLLDEATSA LDVESERVVQ EALNRIMVGI TTLIVAHRLS TVRNADCIAV VHQGKVVEQG AHDQLIKDPD GAYCQLIQLQ
0601: QVHTEGMHEV PYSSGSRLKS RSLSLEQSMR DSPRNRRQHS VKPLGLSGSD DLHGSADTSR QEHKEFGDSE APKKAPIGRL FNLNKPEAPI LLLAVIAAFV
0701: HGLLFPLFSI MMSGGIRTFY YPAHKLRKDS TFWALLCLLL AIISLIAIQL EFFLFGMAGG KLVERVRAFS FQSIMHQEVA WFDDPSNSSG ALGARLFIDA
0801: LNIRRLVGDN LAILVQCTIT LISGFAIAFA SDWKLTLIVI CVIPFLGLQN YIQVKFLNSF SEDAKVMYED ASQVVAEAVG SIRTVASFCA EKRVITMYSK
0901: KCQATMKQGI RSGMVGGLGF SFSNLMLYLT YALCFYVGAL FVHDGKSTFK DVFRVYFALV FTAFGISQTS AMASDSTKAQ ESTTSILAVI DRRSKIDPTS
1001: DEGIKLEKVD GNIDFNHVSF KYPSRPDVQV FSDFTLGIPS GKTTALVGES GSGKSTVIAL LERFYDPDSG TISLDGTELK NLTLSWLRDQ MGLVSQEPVL
1101: FNDTIRANIA YGKRGEATEE EIITVAKAAN AHEFISSLPQ GYNTNVGERG TQLSGGQKQR VAIARAILKD PRVLLLDEAT SALDAESERI VQDALDKVMV
1201: SRTTIVVAHR LSTIKGADTI AVIKDGSVAE KGKHESLMGI KGGVYASLVE LHSKASAS
0101: ALASFLQVSC WTMAGERQSA RIRSLYLEAV LKQDVSFFDV EMTTGEAISR MSADTVLVQD ALGEKLLTTF VGGFVIGFIR GWMLALVMLA CIPPSILSFA
0201: TVSRLRAQIS ARRQASYDDA GNVVEQSIRA IRTVVSFNGE KKAVALYNAL IKKAYKATVL EGLVTGLGIG CIFCVVFCSY SLAFWYGAKL IISKGYTGGQ
0301: VINVVFAILT GSMAIGNASP SISAIAEGQS AAHRLFEIIN RKPKIDISDT SGIELDDIKG DVELNNVFFR YPARPEQLIL NGLSLQVPSG TTMAIVGESG
0401: SGKSTLISLV ERFYDPQAGE VLIDGINIKS LKLKWIRGKI SLVSQEPLLF MTSIKDNITY GKEDATLEEI KRAAELANAA NFIEKLPNAY ETMVGQSGAQ
0501: LSGGQKQRIA IARAILRSPK VLLLDEATSA LDVESERVVQ EALNRIMVGI TTLIVAHRLS TVRNADCIAV VHQGKVVEQG AHDQLIKDPD GAYCQLIQLQ
0601: QVHTEGMHEV PYSSGSRLKS RSLSLEQSMR DSPRNRRQHS VKPLGLSGSD DLHGSADTSR QEHKEFGDSE APKKAPIGRL FNLNKPEAPI LLLAVIAAFV
0701: HGLLFPLFSI MMSGGIRTFY YPAHKLRKDS TFWALLCLLL AIISLIAIQL EFFLFGMAGG KLVERVRAFS FQSIMHQEVA WFDDPSNSSG ALGARLFIDA
0801: LNIRRLVGDN LAILVQCTIT LISGFAIAFA SDWKLTLIVI CVIPFLGLQN YIQVKFLNSF SEDAKVMYED ASQVVAEAVG SIRTVASFCA EKRVITMYSK
0901: KCQATMKQGI RSGMVGGLGF SFSNLMLYLT YALCFYVGAL FVHDGKSTFK DVFRVYFALV FTAFGISQTS AMASDSTKAQ ESTTSILAVI DRRSKIDPTS
1001: DEGIKLEKVD GNIDFNHVSF KYPSRPDVQV FSDFTLGIPS GKTTALVGES GSGKSTVIAL LERFYDPDSG TISLDGTELK NLTLSWLRDQ MGLVSQEPVL
1101: FNDTIRANIA YGKRGEATEE EIITVAKAAN AHEFISSLPQ GYNTNVGERG TQLSGGQKQR VAIARAILKD PRVLLLDEAT SALDAESERI VQDALDKVMV
1201: SRTTIVVAHR LSTIKGADTI AVIKDGSVAE KGKHESLMGI KGGVYASLVE LHSKASAS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.