Factsheet for TraesCS3A01G258000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G290700.1	Wheat	peroxisome	78.28	99.05
TraesCS3D01G257900.1	Wheat	peroxisome	92.99	97.7
HORVU3Hr1G065320.47	Barley	plasma membrane	92.84	96.7
TraesCS3A01G258200.1	Wheat	peroxisome	86.2	91.44
Os01t0695800-01	Rice	plasma membrane	17.87	90.46
Zm00001d011644_P002	Maize	plasma membrane	76.62	79.07
TraesCS3A01G257500.1	Wheat	plasma membrane	69.53	73.35
TraesCS2A01G009900.1	Wheat	plasma membrane	65.38	68.92
TraesCS3A01G258400.3	Wheat	peroxisome	65.31	68.84
TraesCS2A01G009600.1	Wheat	plasma membrane	64.56	68.32
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	61.16	64.11
TraesCS3A01G369700.1	Wheat	peroxisome	60.56	62.73
GSMUA_Achr2P20180_001	Banana	plasma membrane	44.65	60.72
VIT_10s0003g02540.t01	Wine grape	plasma membrane	56.26	60.6
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	52.71	60.15
Bra012621.1-P	Field mustard	plasma membrane	56.49	60.06
KRH21125	Soybean	plasma membrane	56.64	59.56
TraesCS5A01G495900.1	Wheat	plasma membrane	56.86	59.51
VIT_10s0003g02570.t01	Wine grape	plasma membrane	55.2	59.08
Solyc02g071350.2.1	Tomato	plastid	55.96	58.75
PGSC0003DMT400007960	Potato	plasma membrane	55.66	58.48
AT4G18050.2	Thale cress	plasma membrane	54.68	58.19
KRH11119	Soybean	plasma membrane	54.68	58.14
VIT_10s0003g02580.t01	Wine grape	plasma membrane	55.2	57.87
CDY35168	Canola	golgi, peroxisome, plasma membrane	47.29	57.47
Solyc02g071340.1.1	Tomato	plasma membrane	54.22	56.93
TraesCS1A01G081300.1	Wheat	unclear	54.37	56.5
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	23.0	55.96
PGSC0003DMT400034908	Potato	plasma membrane	52.56	55.36
Solyc03g005860.2.1	Tomato	plasma membrane	52.11	54.88
AT5G46540.1	Thale cress	golgi	51.58	54.81
Bra017539.1-P	Field mustard	plasma membrane	40.35	51.89
TraesCS2A01G521400.2	Wheat	cytosol, peroxisome, plasma membrane	41.03	42.97
TraesCS2A01G344300.1	Wheat	cytosol, peroxisome, plasma membrane	40.8	42.83
TraesCS6A01G264900.3	Wheat	golgi	40.57	42.5
TraesCS4A01G370600.1	Wheat	plasma membrane	38.76	41.72
TraesCS7A01G284900.1	Wheat	plasma membrane	37.48	39.89
TraesCS2A01G323900.1	Wheat	plasma membrane	36.58	38.31
TraesCS7A01G303200.1	Wheat	cytosol	22.17	37.6
TraesCS7A01G303100.1	Wheat	peroxisome	33.41	35.05
TraesCS3A01G536300.1	Wheat	cytosol, plasma membrane, vacuole	36.35	34.4
TraesCS4A01G101600.3	Wheat	cytosol, plasma membrane, plastid	36.05	33.92
TraesCS4A01G006900.1	Wheat	peroxisome	36.88	32.71

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF272	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G258000	EnsemblPlants:TraesCS3A01G258000.1	TIGR:cd03249
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:479766816..479773969

Molecular Weight (calculated)

143646.0 Da

IEP (calculated)

8.975

GRAVY (calculated)

0.068

Length

1326 amino acids

Sequence
(BLAST)

0001: MANFPGRFQL RSTQSAQQSK ALRAARKMRI YSASTTPGDR NYTQRSAAGL VVGLINKASS SQEMDATAEA SSGEGARHAH GAKDDRPEKK VPLLGMFRYA
0101: DRLDMLLMVV GSLGAVGNGV SEPLISVLFG DVINSFGEST TSTVLRAVTK VVLNFIYLGI GTTVAAFLQV ACWTMAGERQ SARIRSLYLK SVLRQDIAFF
0201: DTEMTTGEAV SRMSSDTVII QDALGEKAGK LVQLASAFFG GFIIAFTKGW LLTLVMLTSL PLIAIAGAVS AQLLTRVSSK RLTSYSDAAD TVEQTIGSIR
0301: TVVSFNGEKK AIEMYNKFIK NAYKTVVEEG IVNGFGMGSV FCILFSSYGL AFWYGGKLII DKGYTGGKVL TILFAVLTGA TSLGNATPSI SAIAEGQSAA
0401: YRLFETIERK PEIDSDDTSG MIMENIKGDV ELKDVCFRYP ARPGQLILDG LSLQVASGTT MAIVGESGSG KSTVVSLVER FYDPQAGEVL IDGVNIKNLN
0501: LDWIRGKIGL VSQEPLLFMT SIKDNIIYGK EEATLEEIKR AAELANAANF IDKLPNGYDT LVGQRGTLLS GGQKQRIAIA RAILKDPKIL LLDEATSALD
0601: VESERIVQEA LNRIMVQRTT LVVAHRLSTV RNVDCITVVH QGKIVEQGPH HALMKDPNGA YSQLIRLQET RGDERRKIQD SGVPNSLSKS TSLSNRRSMT
0701: KDSFGNSNRY SFKNPLGLSV ELHEDEITGE QNKDDLSNGK TLQKAPIGRL FYLNKPEVPF LLLGAIAASA HGVIFPLFGI LMSGVIKSFY EPPDKLRKDS
0801: SFWALISVVL GFASFIAIPA EYLLFGIAGG KLIERVRTLS FQNIVHQEVA WFDNPSNSSG ALGTRLSVDA LNVRRLVGDN LGLIVQSTAA LITGFVIAFT
0901: ADWRLALIIT CVIPLVGAQG YAQVKFLKGF SEEAKEMYED ASQVATDAVG SIRTIASFCA EKRVVTTYNK KCEALRKQGI RSGIVGGLGF GFSFLVLYLT
1001: YALCFYVGAQ FVRQGKTTFA DVFKVFFALV LAAVGVSQAS ALASNATKAR DSAISVFSIL DRKSKIDTSN DEGLVLENVT GDIHFSNVSF KYPSRPDVQI
1101: FSDFTLHIPS RKTIALVGES GSGKSTIIAL LERFYDPDSG RISVDGVEIK SLRISWLRDQ MGLVGQEPVL FNDTIRANIT YGKHGEVTEE EVTAVAKAAN
1201: AHEFISSLPQ GYDTLVGEKG VQLSGGQKQR VAIARAIIKD PKILLLDEAT SALDAESERV VQDALDRVMV SRTTIVVAHR LSTIKGADMI AVLKEGKIAE
1301: KGKHEALMRI KGGVYASLVE LRSNSE

Best Arabidopsis Sequence Match ( AT1G02520.3 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.