Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G523100.2 | Wheat | cytosol | 99.29 | 98.9 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 97.87 | 98.57 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 98.18 | 97.87 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 93.52 | 93.52 |
| Zm00001d026426_P005 | Maize | cytosol | 93.6 | 93.09 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 44.87 | 92.81 |
| Zm00001d002119_P006 | Maize | cytosol | 92.65 | 92.65 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 77.25 | 86.78 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 82.62 | 82.82 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 81.6 | 82.64 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 81.04 | 82.15 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 80.81 | 81.91 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 80.73 | 81.83 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 80.57 | 81.6 |
| Bra039042.1-P | Field mustard | plasma membrane | 78.67 | 79.55 |
| CDY20012 | Canola | plasma membrane | 78.67 | 79.49 |
| CDY00109 | Canola | plasma membrane | 78.04 | 79.36 |
| Bra025359.1-P | Field mustard | plasma membrane | 78.44 | 79.31 |
| AT3G28860.1 | Thale cress | plasma membrane | 78.36 | 79.23 |
| CDY65012 | Canola | plasma membrane | 78.36 | 79.17 |
| CDX86408 | Canola | plasma membrane | 77.17 | 78.98 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 70.62 | 78.15 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 50.39 | 51.2 |
| TraesCS6A01G264900.3 | Wheat | golgi | 49.92 | 49.92 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 45.02 | 46.27 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 43.92 | 44.23 |
| TraesCS3A01G258200.1 | Wheat | peroxisome | 43.36 | 43.92 |
| TraesCS1A01G081300.1 | Wheat | unclear | 43.92 | 43.57 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 39.65 | 43.2 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 42.81 | 42.34 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 41.79 | 42.22 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 41.94 | 42.21 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.47 | 41.5 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 42.97 | 41.03 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 40.68 | 40.94 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 25.28 | 40.92 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 40.76 | 40.76 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 40.44 | 40.41 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 38.55 | 38.61 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 42.02 | 37.97 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 42.02 | 37.76 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 39.89 | 33.78 |
Protein Annotations
| MapMan:11.2.4.3 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G521400 | EnsemblPlants:TraesCS2A01G521400.2 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:744326086..744332060
Molecular Weight (calculated)
137515.0 Da
IEP (calculated)
8.173
GRAVY (calculated)
0.138
Length
1266 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADPAADGKA EKMANGSAGC DAAAAGQGKK RADQAVAFHE LFSFADRWDL ALMALGTLGA LAHGAAMPFF FLLFGDLING FGKNQTDLRA MTDEVAKYAL
0101: YFVYLGLVVC VASYAEIACW MYTGERQVIA LRKAYLDAVL RQDVGFFDTD ARTGDIVFGV STDTLLVQDA IGEKVGNFMH YLATFFAGLV VGFVSAWRLA
0201: LLSVAVIPAI AFAGGLYAYT LTGLTSKSRE SYANAGVVAE QAIAQVRTVY SFVGESKALN SYSEAIQNTL KLGYKAGMAK GLGIGCTYGI ACMSWALVFW
0301: YAGVFIRNGQ SDGGKAFTAI FSAIVGGMSL GQAFSNLGAF SKGKIAGYKL LEVIRQKPSI VHDHKDGKLL AEVHGNIEFK DVTFSYPSRP DAMIFRDFSL
0401: FFPAGKTVAV VGGSGSGKST VVALIERFYD PNEGQVLLDN VDIKTLQLRW LRDQIGLVNQ EPALFATTII ENVLYGKPDA TMAEVEAAAT ASNAHSFISL
0501: LPNGYNTMVG ERGIQLSGGQ KQRIAIARAM LKDPKILLLD EATSALDADS ENIVQEALDR LMVGRTTVIV AHRLCTIRNV NMIAVLQQGQ VIETGTHDEL
0601: LAKGTSGAYA SLIRFQETAR NRDLGAASTR RSRSMHLTSS LSTKSLSLRS GSLRNLSYQY STGADGRIEM ISSADNSLKY PAPRGYFFKL LKLNGPEWPY
0701: AVLGAIGSVL SGFIGPTFAI VMGEMLDVFY YQDPVEMEKK TKLYVFIYIG TGIYAVVAYL VQHYFFSIMG ENLTTRVRRM MLSAILRNEV GWFDEEENNS
0801: SLVAARVAVD AADVKSAIAE RISVILQNIT SLMTSFIVGF IIEWRVAILI LATFPLLVLA NFAQQLSMKG FAGDTAKAHA KSSMVAGEGV SNIRTVAAFN
0901: AQNKVMSLFS HELRIPEEQI LRRSQTAGLL YGLSQLCLYC SEALILWYGS HLVRSHGSTF SKVIKVFVVL VVTANSVAET VSLAPEIVRG GESIRSIFGI
1001: LNRATRIEPD DPEAERVTTV RGDIELRHVD FSYPSRPDIE IFKDFNLKIQ AGRSQALVGA SGSGKSTVIA LIERFYDPTG GKVMIDGKDI RRLNLKSLRR
1101: RIALVQQEPA LFASSILENI AYGKEGATEE EVVEAAKTAN VHAFVSQLPD GYRTAVGERG VQLSGGQKQR IAIARAVLKD PAILLLDEAT SALDAESESV
1201: LQEALERLMK GRTTVLVAHR LSTIRGVDRI AVVQDGRIIE HGGHSELVAR PEGAYSRLLQ LQNHRN
0101: YFVYLGLVVC VASYAEIACW MYTGERQVIA LRKAYLDAVL RQDVGFFDTD ARTGDIVFGV STDTLLVQDA IGEKVGNFMH YLATFFAGLV VGFVSAWRLA
0201: LLSVAVIPAI AFAGGLYAYT LTGLTSKSRE SYANAGVVAE QAIAQVRTVY SFVGESKALN SYSEAIQNTL KLGYKAGMAK GLGIGCTYGI ACMSWALVFW
0301: YAGVFIRNGQ SDGGKAFTAI FSAIVGGMSL GQAFSNLGAF SKGKIAGYKL LEVIRQKPSI VHDHKDGKLL AEVHGNIEFK DVTFSYPSRP DAMIFRDFSL
0401: FFPAGKTVAV VGGSGSGKST VVALIERFYD PNEGQVLLDN VDIKTLQLRW LRDQIGLVNQ EPALFATTII ENVLYGKPDA TMAEVEAAAT ASNAHSFISL
0501: LPNGYNTMVG ERGIQLSGGQ KQRIAIARAM LKDPKILLLD EATSALDADS ENIVQEALDR LMVGRTTVIV AHRLCTIRNV NMIAVLQQGQ VIETGTHDEL
0601: LAKGTSGAYA SLIRFQETAR NRDLGAASTR RSRSMHLTSS LSTKSLSLRS GSLRNLSYQY STGADGRIEM ISSADNSLKY PAPRGYFFKL LKLNGPEWPY
0701: AVLGAIGSVL SGFIGPTFAI VMGEMLDVFY YQDPVEMEKK TKLYVFIYIG TGIYAVVAYL VQHYFFSIMG ENLTTRVRRM MLSAILRNEV GWFDEEENNS
0801: SLVAARVAVD AADVKSAIAE RISVILQNIT SLMTSFIVGF IIEWRVAILI LATFPLLVLA NFAQQLSMKG FAGDTAKAHA KSSMVAGEGV SNIRTVAAFN
0901: AQNKVMSLFS HELRIPEEQI LRRSQTAGLL YGLSQLCLYC SEALILWYGS HLVRSHGSTF SKVIKVFVVL VVTANSVAET VSLAPEIVRG GESIRSIFGI
1001: LNRATRIEPD DPEAERVTTV RGDIELRHVD FSYPSRPDIE IFKDFNLKIQ AGRSQALVGA SGSGKSTVIA LIERFYDPTG GKVMIDGKDI RRLNLKSLRR
1101: RIALVQQEPA LFASSILENI AYGKEGATEE EVVEAAKTAN VHAFVSQLPD GYRTAVGERG VQLSGGQKQR IAIARAVLKD PAILLLDEAT SALDAESESV
1201: LQEALERLMK GRTTVLVAHR LSTIRGVDRI AVVQDGRIIE HGGHSELVAR PEGAYSRLLQ LQNHRN
0001: MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
Arabidopsis Description
ABCB19ABC transporter B family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.