Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 98.9 | 99.29 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 98.11 | 99.2 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 98.35 | 98.43 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 93.23 | 93.6 |
| Zm00001d026426_P005 | Maize | cytosol | 93.23 | 93.09 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 44.77 | 92.97 |
| Zm00001d002119_P006 | Maize | cytosol | 92.37 | 92.73 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 76.95 | 86.78 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 81.59 | 82.96 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 82.14 | 82.66 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 81.04 | 82.47 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 80.8 | 82.23 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 80.72 | 82.15 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 80.57 | 81.92 |
| Bra039042.1-P | Field mustard | plasma membrane | 78.68 | 79.87 |
| CDY20012 | Canola | plasma membrane | 78.68 | 79.81 |
| CDY00109 | Canola | plasma membrane | 78.05 | 79.68 |
| Bra025359.1-P | Field mustard | plasma membrane | 78.44 | 79.63 |
| AT3G28860.1 | Thale cress | plasma membrane | 78.36 | 79.55 |
| CDY65012 | Canola | plasma membrane | 78.36 | 79.49 |
| CDX86408 | Canola | plasma membrane | 77.18 | 79.3 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 70.34 | 78.15 |
| TraesCS6D01G250000.1 | Wheat | golgi | 50.04 | 50.44 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 51.38 | 47.49 |
| TraesCS7D01G068400.1 | Wheat | plasma membrane | 45.08 | 46.51 |
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 43.75 | 44.27 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 31.63 | 44.22 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 43.9 | 43.73 |
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 42.88 | 43.6 |
| TraesCS3D01G257900.1 | Wheat | peroxisome | 42.8 | 43.11 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 42.01 | 42.62 |
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.64 | 42.38 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 41.94 | 42.37 |
| TraesCS1D01G374300.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.62 | 41.69 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 40.99 | 41.19 |
| TraesCS3D01G258200.2 | Wheat | peroxisome | 40.76 | 41.14 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 40.52 | 40.78 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 39.97 | 40.38 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 38.4 | 38.61 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 37.77 | 38.25 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 41.86 | 37.81 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 41.86 | 37.76 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 39.81 | 33.73 |
Protein Annotations
| MapMan:11.2.4.3 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G523100 | EnsemblPlants:TraesCS2D01G523100.2 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr2D:+:611892623..611898627
Molecular Weight (calculated)
137948.0 Da
IEP (calculated)
8.262
GRAVY (calculated)
0.133
Length
1271 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADTAADGKA EKMEKAANGS AGCDAAAAGA GQGKKRADQA VAFHELFSFA DRWDLALMSL GTLGALAHGA AMPCFFLLFG DLINGFGKNQ TDLRAMTDEV
0101: AKYALYFVYL GLVVCVASYA EIACWMYTGE RQVIALRKAY LDAVLRQDVG FFDTDARTGD IVFGVSTDTL LVQDAIGEKV GNFMHYLATF FAGLVVGFVS
0201: AWRLALLSVA VIPAIAFAGG LYAYTLTGLT SKSRESYANA GVVAEQAIAQ VRTVYSFVGE SKALNSYSEA IQNTLKLGYK AGMAKGLGIG CTYGIACMSW
0301: ALVFWYAGVF IRNGQSDGGK AFTAIFSAIV GGMSLGQAFS NLGAFSKGKI AGYKLLEVIR QKPSIVHDHK DGKLLAEVHG NIEFKDVTFS YPSRPDAMIF
0401: RDFSLFFPAG KTVAVVGGSG SGKSTVVALI ERFYDPNEGQ VLLDNVDIKT LQLRWLRDQI GLVNQEPALF ATTIIENILY GKPDATMAEV EAAATASNAH
0501: SFISLLPNGY NTMVGERGIQ LSGGQKQRIA IARAMLKDPK ILLLDEATSA LDADSENIVQ EALDRLMVGR TTVIVAHRLC TIRNVNMIAV LQQGQVIETG
0601: THDELLAKGT SGAYASLIRF QETARNRDLG AASTRRSRSM HLTSSLSTKS LSLRSGSLRN LSYQYSTGAD GRIEMISSAD NSLKYPAPRG YFFKLLKLNG
0701: PEWPYAVLGA IGSVLSGFIG PTFAIVMGEM LDVFYYKDPV EMEKKTKLYV FIYIGTGIYA VVAYLVQHYF FSIMGENLTT RVRRMMLSAI LRNEVGWFDE
0801: EENNSSLVAA RVAVDAADVK SAIAERISVI LQNITSLMTS FIVGFIIEWR VAILILATFP LLVLANFAQQ LSMKGFAGDT AKAHAKSSMV AGEGVSNIRT
0901: VAAFNAQNKV MSLFSHELRI PEEQILRRSQ TAGLLYGLSQ LCLYCSEALI LWYGSHLVRS HGSTFSKVIK VFVVLVVTAN SVAETVSLAP EIIRGGESIR
1001: SIFGILNRAT RIEPDDPEAE RVTTVRGDIE LRHVDFSYPS RPDIEIFKDF NLKIQAGRSQ ALVGASGSGK STVIALIERF YDPTGGKVMI DGKDIRRLNL
1101: KSLRRKIALV QQEPALFASS ILENIAYGKE GATEEEVVEA AKTANVHAFV SQLPDGYRTA VGERGVQLSG GQKQRIAIAR AVLKDPAILL LDEATSALDA
1201: ESESVLQEAL ERLMKGRTTV LVAHRLSTIR GVDRIAVVQD GRIIEHGGHS ELVARPEGAY SRLLQLQNHR N
0101: AKYALYFVYL GLVVCVASYA EIACWMYTGE RQVIALRKAY LDAVLRQDVG FFDTDARTGD IVFGVSTDTL LVQDAIGEKV GNFMHYLATF FAGLVVGFVS
0201: AWRLALLSVA VIPAIAFAGG LYAYTLTGLT SKSRESYANA GVVAEQAIAQ VRTVYSFVGE SKALNSYSEA IQNTLKLGYK AGMAKGLGIG CTYGIACMSW
0301: ALVFWYAGVF IRNGQSDGGK AFTAIFSAIV GGMSLGQAFS NLGAFSKGKI AGYKLLEVIR QKPSIVHDHK DGKLLAEVHG NIEFKDVTFS YPSRPDAMIF
0401: RDFSLFFPAG KTVAVVGGSG SGKSTVVALI ERFYDPNEGQ VLLDNVDIKT LQLRWLRDQI GLVNQEPALF ATTIIENILY GKPDATMAEV EAAATASNAH
0501: SFISLLPNGY NTMVGERGIQ LSGGQKQRIA IARAMLKDPK ILLLDEATSA LDADSENIVQ EALDRLMVGR TTVIVAHRLC TIRNVNMIAV LQQGQVIETG
0601: THDELLAKGT SGAYASLIRF QETARNRDLG AASTRRSRSM HLTSSLSTKS LSLRSGSLRN LSYQYSTGAD GRIEMISSAD NSLKYPAPRG YFFKLLKLNG
0701: PEWPYAVLGA IGSVLSGFIG PTFAIVMGEM LDVFYYKDPV EMEKKTKLYV FIYIGTGIYA VVAYLVQHYF FSIMGENLTT RVRRMMLSAI LRNEVGWFDE
0801: EENNSSLVAA RVAVDAADVK SAIAERISVI LQNITSLMTS FIVGFIIEWR VAILILATFP LLVLANFAQQ LSMKGFAGDT AKAHAKSSMV AGEGVSNIRT
0901: VAAFNAQNKV MSLFSHELRI PEEQILRRSQ TAGLLYGLSQ LCLYCSEALI LWYGSHLVRS HGSTFSKVIK VFVVLVVTAN SVAETVSLAP EIIRGGESIR
1001: SIFGILNRAT RIEPDDPEAE RVTTVRGDIE LRHVDFSYPS RPDIEIFKDF NLKIQAGRSQ ALVGASGSGK STVIALIERF YDPTGGKVMI DGKDIRRLNL
1101: KSLRRKIALV QQEPALFASS ILENIAYGKE GATEEEVVEA AKTANVHAFV SQLPDGYRTA VGERGVQLSG GQKQRIAIAR AVLKDPAILL LDEATSALDA
1201: ESESVLQEAL ERLMKGRTTV LVAHRLSTIR GVDRIAVVQD GRIIEHGGHS ELVARPEGAY SRLLQLQNHR N
0001: MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
Arabidopsis Description
ABCB19ABC transporter B family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.