Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G523100.2 | Wheat | cytosol | 99.2 | 98.11 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 98.57 | 97.87 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 98.81 | 97.8 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 93.32 | 92.65 |
| Zm00001d026426_P005 | Maize | cytosol | 93.64 | 92.46 |
| Zm00001d002119_P006 | Maize | cytosol | 92.68 | 92.02 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 44.55 | 91.5 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 77.72 | 86.69 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 82.02 | 82.48 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 82.66 | 82.2 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 81.38 | 81.91 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 81.15 | 81.67 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 81.15 | 81.67 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 80.99 | 81.44 |
| Bra039042.1-P | Field mustard | plasma membrane | 79.32 | 79.63 |
| CDY20012 | Canola | plasma membrane | 79.24 | 79.49 |
| CDY00109 | Canola | plasma membrane | 78.6 | 79.36 |
| Bra025359.1-P | Field mustard | plasma membrane | 78.92 | 79.23 |
| AT3G28860.1 | Thale cress | plasma membrane | 78.92 | 79.23 |
| CDY65012 | Canola | plasma membrane | 78.84 | 79.09 |
| CDX86408 | Canola | plasma membrane | 77.65 | 78.9 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 71.12 | 78.15 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 11.54 | 57.31 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 50.36 | 50.12 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 51.55 | 47.37 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.31 | 43.69 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 43.99 | 43.65 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 42.56 | 42.7 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 42.64 | 42.61 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 42.48 | 42.58 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 42.96 | 42.25 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 42.32 | 42.09 |
| TraesCS2B01G012200.1 | Wheat | golgi | 35.88 | 41.8 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 41.61 | 41.57 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 41.61 | 41.38 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 41.61 | 41.34 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 40.73 | 40.47 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 40.33 | 40.3 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 32.86 | 39.41 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 38.66 | 38.76 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 38.82 | 38.61 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 40.02 | 38.28 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 42.4 | 37.83 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 42.32 | 37.73 |
Protein Annotations
| MapMan:11.2.4.3 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G550700 | EnsemblPlants:TraesCS2B01G550700.2 | TIGR:cd03249 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:746316966..746323002
Molecular Weight (calculated)
136606.0 Da
IEP (calculated)
8.500
GRAVY (calculated)
0.141
Length
1257 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEKAANGSAG CDAAAAGQGK KRADQAVAFH ELFSFADRWD LALMSLGTLG ALAHGAAMPC FFLLFGDLIN GFGKNQTDLR AMTDEVAKYA LYFVYLGLVV
0101: CVASYAEIAC WMYTGERQVI ALRKAYLDAV LRQDVGFFDT DARTGDIVFG VSTDTLLVQD AIGEKVGNFM HYLATFFAGL VVGFVSAWRL ALLSVAVIPA
0201: IAFAGGLYAY TLTGLTSKSR ESYANAGVVA EQAIAQVRTV YSFVGESKAL NSYSEAIQNT LKLGYKAGMA KGLGIGCTYG IACMSWALVF WYAGVFIRNG
0301: QSDGGKAFTA IFSAIVGGMS LGQAFSNLGA FSKGKIAGYK LLEVIRHRPS IVHDHKDGKL LAEVHGNIEF KDVTFSYPSR PDAMIFRDFS LFFPAGKTVA
0401: VVGGSGSGKS TVVALIERFY DPNEGQVLLD NVDIKTLQLR WLRDQIGLVN QEPALFATTI IENILYGKPD ATIAEVEAAA TASNAHSFIS LLPNGYNTMV
0501: GERGIQLSGG QKQRIAIARA MLKDPKILLL DEATSALDAD SENIVQEALD RLMVGRTTVI VAHRLCTIRN VNMIAVLQQG QVIETGTHDE LLAKGTSGAY
0601: ASLIRFQESA RNRDLGAAST RRSRSMHLTS SLSTKSLSLR SGSLRNLSYQ YSTGADGRIE MISSADNSLK YPAPRGYFFK LLKLNGPEWP YAVLGAIGSV
0701: LSGFIGPTFA IVMGEMLDVF YYKDPVQMEK KTKLYVFIYI GTGIYAVVAY LVQHYFFSIM GENLTTRVRR MMLSAILRNE VGWFDEEENN SSLVAARVAV
0801: DAADVKSAIA ERISVILQNI TSLMTSFIVG FVIEWRVAIL ILATFPLLVL ANFAQQLSMK GFAGDTAKAH AKSSMVAGEG VSNIRTVAAF NAQNKVMSLF
0901: SHELRIPEEQ ILRRSQTAGL LYGLSQLCLY CSEALILWYG SHLVRSHGST FSKVIKVFVV LVVTANSVAE TVSLAPEIIR GGESIRSIFG ILNRATRIEP
1001: DDPEAERVTT VRGDIELRHV DFSYPSRPDI EIFKDFNLKI QAGRSQALVG ASGSGKSTVI ALIERFYDPT GGKVMIDGRD IRRLNLKSLR RKIGLVQQEP
1101: ALFASSILEN IAYGKEGATE EEVVEAAKTA NVHAFVSQLP DGYRTAVGER GVQLSGGQKQ RIAIARAVLK DPAILLLDEA TSALDAESES VLQEALERLM
1201: KGRTTVLVAH RLSTIRGVDR IAVVQDGRVV EHGGHSELVA RPEGAYSRLL QLQNHRN
0101: CVASYAEIAC WMYTGERQVI ALRKAYLDAV LRQDVGFFDT DARTGDIVFG VSTDTLLVQD AIGEKVGNFM HYLATFFAGL VVGFVSAWRL ALLSVAVIPA
0201: IAFAGGLYAY TLTGLTSKSR ESYANAGVVA EQAIAQVRTV YSFVGESKAL NSYSEAIQNT LKLGYKAGMA KGLGIGCTYG IACMSWALVF WYAGVFIRNG
0301: QSDGGKAFTA IFSAIVGGMS LGQAFSNLGA FSKGKIAGYK LLEVIRHRPS IVHDHKDGKL LAEVHGNIEF KDVTFSYPSR PDAMIFRDFS LFFPAGKTVA
0401: VVGGSGSGKS TVVALIERFY DPNEGQVLLD NVDIKTLQLR WLRDQIGLVN QEPALFATTI IENILYGKPD ATIAEVEAAA TASNAHSFIS LLPNGYNTMV
0501: GERGIQLSGG QKQRIAIARA MLKDPKILLL DEATSALDAD SENIVQEALD RLMVGRTTVI VAHRLCTIRN VNMIAVLQQG QVIETGTHDE LLAKGTSGAY
0601: ASLIRFQESA RNRDLGAAST RRSRSMHLTS SLSTKSLSLR SGSLRNLSYQ YSTGADGRIE MISSADNSLK YPAPRGYFFK LLKLNGPEWP YAVLGAIGSV
0701: LSGFIGPTFA IVMGEMLDVF YYKDPVQMEK KTKLYVFIYI GTGIYAVVAY LVQHYFFSIM GENLTTRVRR MMLSAILRNE VGWFDEEENN SSLVAARVAV
0801: DAADVKSAIA ERISVILQNI TSLMTSFIVG FVIEWRVAIL ILATFPLLVL ANFAQQLSMK GFAGDTAKAH AKSSMVAGEG VSNIRTVAAF NAQNKVMSLF
0901: SHELRIPEEQ ILRRSQTAGL LYGLSQLCLY CSEALILWYG SHLVRSHGST FSKVIKVFVV LVVTANSVAE TVSLAPEIIR GGESIRSIFG ILNRATRIEP
1001: DDPEAERVTT VRGDIELRHV DFSYPSRPDI EIFKDFNLKI QAGRSQALVG ASGSGKSTVI ALIERFYDPT GGKVMIDGRD IRRLNLKSLR RKIGLVQQEP
1101: ALFASSILEN IAYGKEGATE EEVVEAAKTA NVHAFVSQLP DGYRTAVGER GVQLSGGQKQ RIAIARAVLK DPAILLLDEA TSALDAESES VLQEALERLM
1201: KGRTTVLVAH RLSTIRGVDR IAVVQDGRVV EHGGHSELVA RPEGAYSRLL QLQNHRN
0001: MDNTERSSNG NIQAETEAKE EKKNIKKESV SLMGLFSAAD KLDYFLMLLG GLGACIHGAT LPLFFVFFGK MLDSLGNLST DPKAISSRVS QNALYLVYLG
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
Arabidopsis Description
ABCB13PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.