Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.36 | 98.28 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 98.12 | 97.97 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 54.23 | 82.99 |
| KXG32655 | Sorghum | peroxisome | 81.77 | 80.94 |
| Os01t0534700-00 | Rice | plasma membrane | 69.41 | 80.2 |
| KXG35311 | Sorghum | plasma membrane | 78.48 | 79.92 |
| Zm00001d044564_P008 | Maize | cytosol, peroxisome, plasma membrane | 81.77 | 78.99 |
| Zm00001d005528_P001 | Maize | plasma membrane | 72.61 | 77.14 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 14.55 | 73.52 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 63.77 | 64.33 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 61.74 | 62.72 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 60.33 | 62.63 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 61.27 | 61.95 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 46.95 | 61.54 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 59.7 | 60.89 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 49.92 | 60.88 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 59.7 | 60.85 |
| TraesCS2B01G012200.1 | Wheat | golgi | 51.1 | 60.52 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 59.47 | 60.08 |
| Bra012621.1-P | Field mustard | plasma membrane | 58.22 | 59.66 |
| KRH11119 | Soybean | plasma membrane | 57.98 | 59.42 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 58.53 | 59.18 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 57.28 | 59.08 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.29 | 58.99 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 58.14 | 58.87 |
| KRH21125 | Soybean | plasma membrane | 57.98 | 58.76 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.53 | 58.67 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 50.0 | 58.57 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 57.43 | 58.02 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 57.04 | 57.95 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 56.96 | 57.64 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.57 | 57.61 |
| AT4G18050.2 | Thale cress | plasma membrane | 56.02 | 57.46 |
| AT5G46540.1 | Thale cress | golgi | 54.3 | 55.61 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 54.15 | 54.96 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 53.52 | 54.33 |
| Bra017539.1-P | Field mustard | plasma membrane | 43.19 | 53.54 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 42.25 | 42.96 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 42.25 | 42.76 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.18 | 42.64 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 40.85 | 38.16 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 36.85 | 37.23 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 36.54 | 37.12 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 35.84 | 36.52 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 35.37 | 35.76 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 35.84 | 34.86 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 37.01 | 33.55 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 36.38 | 33.0 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF239 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G401600 | EnsemblPlants:TraesCS3B01G401600.3 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3B:-:636245634..636269418
Molecular Weight (calculated)
138429.0 Da
IEP (calculated)
7.087
GRAVY (calculated)
0.114
Length
1278 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGGRGREQGG ERDDVNGGGE DGADGHERRP AAPRVPLYRM FAFADRTDAA LMAVGAATAV ANGMAQPLMT FIFGDVIDAF GSAASSRDVL HRVTKVIINF
0101: VYLGIGAGLA STLQVSCWTI TGERQAARIR AMYLKAILRQ DIAFFDKEMS TGQVVERMSG DTFLIQDAIG EKVGKIIQLL STFFGGFIVA FVRGWLLTLV
0201: MLSSIPPVAV AGAIVSRMMT TLSTKMQAKY GDAGDIVEQT IGTIRTVVSF NGEKQAITTY NKFIRKAYES ARREGAVSGL GVGSIMAILF CSYGLAVWYG
0301: SKLIVDRGYN GGIVITIIMS VMVGAMSLGQ AAPSITAFAQ GQGAAYRMFK TIERQPCIDV YNTTGIILED IKGDVELKDV YFSYPTRPEH LVFDGFSLLV
0401: PSGTTMALVG VSGSGKSTVV SLVERFYDPQ SGEVLIDGVD IRRMTLGWIR GKIGLVSQEP VLFSSTIREN ISYGKDDLNL EEIRRAIELA NAANFIDKLP
0501: NGLETMVGER GIQLSGGQKQ RIAIARAIIK NPRILLLDEA TSALDMESER VVQEALDRVM LERTTIIVAH RLSTVKNADV ISVLQHGKIV EQGSHVELVN
0601: KPEGAYSQLI HLQETLQVAE APNVDPDAIM ENSFGSRSFT RKPRSQGSSF RRSTSKGSSF GHSGTHPYPA PCDPMEFNND QDLEESADKI SSDRKKAPIG
0701: RLFYLNKPEA LVLALGSVAA AMHGAILPVY GILISSAIKT FYEPPAELLK DSRFWASMFA MLGACALVLI PIEYFLFGLA GGKLVERIRS LTFRSVMHQD
0801: INWFDKPEHS SGAIGARLST DALNVKRLVG ENLALNVQTI STIIVGFAIA MVANWKLALI ITVVVPLVGF QAYAQMKFLK GLNKNAKLKY EEASQVATDA
0901: VGGIRTVASF CAEQKVMDAY EKKCESPTRQ GVREGVVGGL GFGFSFLMFY LTYALCFYVG AKFVHEGTAT FPEVFRVFFV LVLAATGISR TSAVGADSTK
1001: ASESAISVFE ILDRKSKIDS SSEEGMVVAN LRGDIEFQNV CFSYPLRPNV QIFTDLSLII PSGKTAALVG ESGSGKSTAI ALLERFYDPS SGRILFDGVE
1101: LPTLKVSWLR LQIGLVAQEP VLFNDTIRAN IAYGKQGEAS EEEIVAAAEA ANAHQFISGL PDGYNTIVGE RGIQLSGGQK QRVAIARAVI KDPKMLLLDE
1201: ATSALDAESE RVVQEALDRV MVGRTTVVVA HRLSTVRGAD IISVVKNGTI VEKGRHEELM RMKDGAYASL VELSSTSR
0101: VYLGIGAGLA STLQVSCWTI TGERQAARIR AMYLKAILRQ DIAFFDKEMS TGQVVERMSG DTFLIQDAIG EKVGKIIQLL STFFGGFIVA FVRGWLLTLV
0201: MLSSIPPVAV AGAIVSRMMT TLSTKMQAKY GDAGDIVEQT IGTIRTVVSF NGEKQAITTY NKFIRKAYES ARREGAVSGL GVGSIMAILF CSYGLAVWYG
0301: SKLIVDRGYN GGIVITIIMS VMVGAMSLGQ AAPSITAFAQ GQGAAYRMFK TIERQPCIDV YNTTGIILED IKGDVELKDV YFSYPTRPEH LVFDGFSLLV
0401: PSGTTMALVG VSGSGKSTVV SLVERFYDPQ SGEVLIDGVD IRRMTLGWIR GKIGLVSQEP VLFSSTIREN ISYGKDDLNL EEIRRAIELA NAANFIDKLP
0501: NGLETMVGER GIQLSGGQKQ RIAIARAIIK NPRILLLDEA TSALDMESER VVQEALDRVM LERTTIIVAH RLSTVKNADV ISVLQHGKIV EQGSHVELVN
0601: KPEGAYSQLI HLQETLQVAE APNVDPDAIM ENSFGSRSFT RKPRSQGSSF RRSTSKGSSF GHSGTHPYPA PCDPMEFNND QDLEESADKI SSDRKKAPIG
0701: RLFYLNKPEA LVLALGSVAA AMHGAILPVY GILISSAIKT FYEPPAELLK DSRFWASMFA MLGACALVLI PIEYFLFGLA GGKLVERIRS LTFRSVMHQD
0801: INWFDKPEHS SGAIGARLST DALNVKRLVG ENLALNVQTI STIIVGFAIA MVANWKLALI ITVVVPLVGF QAYAQMKFLK GLNKNAKLKY EEASQVATDA
0901: VGGIRTVASF CAEQKVMDAY EKKCESPTRQ GVREGVVGGL GFGFSFLMFY LTYALCFYVG AKFVHEGTAT FPEVFRVFFV LVLAATGISR TSAVGADSTK
1001: ASESAISVFE ILDRKSKIDS SSEEGMVVAN LRGDIEFQNV CFSYPLRPNV QIFTDLSLII PSGKTAALVG ESGSGKSTAI ALLERFYDPS SGRILFDGVE
1101: LPTLKVSWLR LQIGLVAQEP VLFNDTIRAN IAYGKQGEAS EEEIVAAAEA ANAHQFISGL PDGYNTIVGE RGIQLSGGQK QRVAIARAVI KDPKMLLLDE
1201: ATSALDAESE RVVQEALDRV MVGRTTVVVA HRLSTVRGAD IISVVKNGTI VEKGRHEELM RMKDGAYASL VELSSTSR
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.